View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17117_low_101 (Length: 208)
Name: NF17117_low_101
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17117_low_101 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 36774330 - 36774155
Alignment:
| Q |
17 |
aatttccgtagttagcaacttcctctttgcttcccaactctagtcacacgcgaagacaaggtatcaggtttgaaatttctatgcaacttattcacagcac |
116 |
Q |
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| T |
36774330 |
aatttccgtagttagcaacttcctctttgcttcccaactctagtcacacgcgacgacaaggtatcaggtttgaaatttctatgcaacttattcacggcac |
36774231 |
T |
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| Q |
117 |
ttattagttaaactggtttatgtgaagtagtatatgatacattattttcatcttaattagttcctctagtttgatc |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36774230 |
ttattagttaaactggtttatgtgaagtagtatatgatacattattttcatcttaattagttcctctagtttgatc |
36774155 |
T |
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