View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17117_low_72 (Length: 273)

Name: NF17117_low_72
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17117_low_72
NF17117_low_72
[»] chr4 (26 HSPs)
chr4 (7-261)||(16522997-16523252)
chr4 (20-261)||(8045123-8045365)
chr4 (15-261)||(32460537-32460784)
chr4 (15-261)||(14500046-14500293)
chr4 (7-113)||(9795533-9795639)
chr4 (7-113)||(19020793-19020899)
chr4 (20-150)||(19697217-19697346)
chr4 (20-150)||(19707802-19707931)
chr4 (182-255)||(9295879-9295953)
chr4 (196-261)||(9795395-9795461)
chr4 (15-112)||(22738577-22738675)
chr4 (208-261)||(14996306-14996359)
chr4 (196-254)||(19697383-19697442)
chr4 (196-254)||(19707968-19708027)
chr4 (39-113)||(15674967-15675041)
chr4 (40-113)||(40885418-40885491)
chr4 (39-112)||(55376452-55376525)
chr4 (39-113)||(10104128-10104202)
chr4 (39-113)||(15135865-15135939)
chr4 (39-113)||(15272169-15272243)
chr4 (15-95)||(18248543-18248624)
chr4 (72-113)||(33241011-33241052)
chr4 (212-260)||(34177668-34177716)
chr4 (39-110)||(31132628-31132699)
chr4 (39-113)||(13246737-13246811)
chr4 (81-113)||(54118168-54118200)
[»] scaffold0023 (2 HSPs)
scaffold0023 (7-261)||(61048-61303)
scaffold0023 (39-113)||(48903-48977)
[»] chr6 (22 HSPs)
chr6 (7-261)||(18823209-18823464)
chr6 (7-261)||(18839064-18839319)
chr6 (23-261)||(32276601-32276840)
chr6 (20-150)||(19629612-19629740)
chr6 (20-150)||(16299825-16299953)
chr6 (15-113)||(13620644-13620743)
chr6 (196-261)||(16299991-16300057)
chr6 (196-261)||(19629509-19629575)
chr6 (20-111)||(15742058-15742150)
chr6 (20-113)||(18002333-18002427)
chr6 (39-113)||(26090059-26090133)
chr6 (39-113)||(23148303-23148377)
chr6 (39-113)||(23153754-23153828)
chr6 (39-113)||(27751742-27751816)
chr6 (43-113)||(35009314-35009384)
chr6 (39-113)||(23995247-23995321)
chr6 (39-113)||(29666181-29666255)
chr6 (80-113)||(1657660-1657693)
chr6 (80-113)||(15862789-15862822)
chr6 (212-261)||(15889734-15889783)
chr6 (212-261)||(22585574-22585623)
chr6 (212-261)||(22590405-22590454)
[»] chr3 (24 HSPs)
chr3 (15-261)||(16933803-16934050)
chr3 (15-261)||(14285140-14285387)
chr3 (20-261)||(19946877-19947120)
chr3 (7-113)||(12901933-12902039)
chr3 (7-113)||(15938320-15938426)
chr3 (7-113)||(15936478-15936584)
chr3 (15-150)||(11477029-11477163)
chr3 (7-76)||(9302968-9303036)
chr3 (196-261)||(9303110-9303176)
chr3 (196-261)||(8268755-8268821)
chr3 (196-261)||(8275855-8275921)
chr3 (196-253)||(11477201-11477259)
chr3 (39-113)||(11986038-11986112)
chr3 (39-113)||(16261777-16261851)
chr3 (39-113)||(54651764-54651838)
chr3 (40-113)||(51960990-51961063)
chr3 (15-112)||(44229293-44229391)
chr3 (39-113)||(53771365-53771439)
chr3 (39-113)||(2050115-2050189)
chr3 (39-113)||(38168237-38168311)
chr3 (80-113)||(13839200-13839233)
chr3 (212-261)||(15550776-15550825)
chr3 (212-261)||(48421755-48421804)
chr3 (81-113)||(15857163-15857195)
[»] chr5 (14 HSPs)
chr5 (20-261)||(9730216-9730459)
chr5 (39-261)||(108686-108909)
chr5 (15-261)||(7529079-7529326)
chr5 (15-150)||(17909787-17909921)
chr5 (20-113)||(34939595-34939688)
chr5 (196-261)||(17909684-17909750)
chr5 (40-113)||(25005137-25005210)
chr5 (39-113)||(27182429-27182503)
chr5 (39-111)||(18530946-18531018)
chr5 (39-113)||(22053711-22053785)
chr5 (39-113)||(23507270-23507344)
chr5 (39-109)||(32951016-32951086)
chr5 (39-116)||(23981363-23981440)
chr5 (39-111)||(2032135-2032207)
[»] chr8 (17 HSPs)
chr8 (20-261)||(3431114-3431357)
chr8 (15-261)||(22886505-22886753)
chr8 (15-261)||(21494290-21494537)
chr8 (7-133)||(16038713-16038839)
chr8 (7-150)||(2545229-2545371)
chr8 (20-150)||(22147720-22147849)
chr8 (22-150)||(18612688-18612815)
chr8 (196-261)||(16038892-16038958)
chr8 (196-261)||(18612585-18612651)
chr8 (196-261)||(18619490-18619556)
chr8 (196-261)||(22147617-22147683)
chr8 (208-261)||(2545125-2545178)
chr8 (39-113)||(24385610-24385684)
chr8 (39-113)||(43373350-43373424)
chr8 (81-123)||(16404900-16404942)
chr8 (80-150)||(22907127-22907196)
chr8 (212-261)||(21259519-21259568)
[»] chr7 (19 HSPs)
chr7 (20-261)||(371268-371511)
chr7 (7-113)||(18253685-18253792)
chr7 (7-113)||(15862226-15862332)
chr7 (15-114)||(47480878-47480977)
chr7 (20-112)||(10000225-10000318)
chr7 (39-113)||(13321334-13321408)
chr7 (39-113)||(25124450-25124524)
chr7 (20-112)||(48622521-48622614)
chr7 (15-112)||(16418805-16418903)
chr7 (39-113)||(2029244-2029318)
chr7 (39-113)||(36052971-36053045)
chr7 (39-113)||(42056146-42056220)
chr7 (212-261)||(39291537-39291586)
chr7 (80-150)||(7293297-7293366)
chr7 (39-113)||(11580619-11580693)
chr7 (39-113)||(13036896-13036970)
chr7 (39-113)||(15709469-15709543)
chr7 (39-113)||(16212071-16212145)
chr7 (80-150)||(30262042-30262111)
[»] scaffold0615 (1 HSPs)
scaffold0615 (15-261)||(6043-6292)
[»] chr2 (16 HSPs)
chr2 (39-261)||(33128223-33128446)
chr2 (20-261)||(17204510-17204753)
chr2 (82-261)||(24826615-24826795)
chr2 (15-261)||(28031068-28031315)
chr2 (7-113)||(7507683-7507789)
chr2 (7-113)||(23777888-23777994)
chr2 (195-261)||(15633392-15633459)
chr2 (15-112)||(5888480-5888578)
chr2 (15-112)||(21142203-21142301)
chr2 (39-113)||(25265261-25265335)
chr2 (39-113)||(24341267-24341341)
chr2 (214-261)||(22284133-22284180)
chr2 (39-113)||(463043-463117)
chr2 (81-150)||(19689315-19689383)
chr2 (39-112)||(32466177-32466249)
chr2 (81-113)||(19794629-19794661)
[»] scaffold0173 (1 HSPs)
scaffold0173 (15-261)||(5400-5647)
[»] scaffold0367 (1 HSPs)
scaffold0367 (80-261)||(17208-17390)
[»] scaffold0207 (1 HSPs)
scaffold0207 (15-261)||(17877-18124)
[»] scaffold0335 (1 HSPs)
scaffold0335 (15-261)||(5411-5657)
[»] chr1 (5 HSPs)
chr1 (113-261)||(21649967-21650116)
chr1 (7-150)||(20254595-20254736)
chr1 (208-261)||(20254492-20254545)
chr1 (39-113)||(20893509-20893583)
chr1 (39-113)||(20913335-20913409)
[»] scaffold0118 (1 HSPs)
scaffold0118 (15-261)||(34242-34489)
[»] scaffold0032 (2 HSPs)
scaffold0032 (15-113)||(13201-13299)
scaffold0032 (39-113)||(108033-108107)
[»] scaffold0574 (2 HSPs)
scaffold0574 (15-150)||(9345-9480)
scaffold0574 (196-261)||(9518-9584)
[»] scaffold0001 (4 HSPs)
scaffold0001 (20-150)||(164810-164939)
scaffold0001 (196-261)||(164976-165042)
scaffold0001 (39-113)||(172210-172284)
scaffold0001 (39-113)||(177913-177987)
[»] scaffold0026 (1 HSPs)
scaffold0026 (7-113)||(108053-108159)
[»] scaffold0029 (2 HSPs)
scaffold0029 (15-150)||(49686-49820)
scaffold0029 (208-261)||(49871-49924)
[»] scaffold0049 (1 HSPs)
scaffold0049 (7-150)||(48468-48610)
[»] scaffold0125 (1 HSPs)
scaffold0125 (15-113)||(41965-42063)
[»] scaffold0387 (1 HSPs)
scaffold0387 (20-113)||(7034-7127)
[»] scaffold0075 (1 HSPs)
scaffold0075 (20-113)||(34312-34405)
[»] scaffold0037 (2 HSPs)
scaffold0037 (20-150)||(95262-95392)
scaffold0037 (196-261)||(95157-95223)
[»] scaffold0162 (3 HSPs)
scaffold0162 (208-261)||(11923-11976)
scaffold0162 (39-113)||(12063-12137)
scaffold0162 (40-113)||(8051-8125)
[»] scaffold0303 (1 HSPs)
scaffold0303 (15-113)||(4279-4378)
[»] scaffold0361 (1 HSPs)
scaffold0361 (15-113)||(3505-3601)
[»] scaffold0066 (2 HSPs)
scaffold0066 (15-113)||(45338-45437)
scaffold0066 (20-113)||(54724-54818)
[»] scaffold0132 (1 HSPs)
scaffold0132 (47-113)||(13824-13890)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-112)||(7517-7615)
[»] scaffold0160 (1 HSPs)
scaffold0160 (39-112)||(339-412)
[»] scaffold0017 (1 HSPs)
scaffold0017 (20-112)||(54182-54275)
[»] scaffold0498 (1 HSPs)
scaffold0498 (39-113)||(9183-9257)
[»] scaffold0467 (1 HSPs)
scaffold0467 (43-113)||(10218-10288)
[»] scaffold0251 (1 HSPs)
scaffold0251 (39-113)||(13243-13317)
[»] scaffold0011 (1 HSPs)
scaffold0011 (39-113)||(123045-123119)
[»] scaffold1295 (1 HSPs)
scaffold1295 (212-261)||(284-333)
[»] scaffold0516 (1 HSPs)
scaffold0516 (20-112)||(11982-12075)
[»] scaffold0507 (1 HSPs)
scaffold0507 (212-261)||(1529-1578)
[»] scaffold0158 (1 HSPs)
scaffold0158 (39-112)||(25532-25605)
[»] scaffold0009 (1 HSPs)
scaffold0009 (41-113)||(272330-272402)
[»] scaffold0597 (1 HSPs)
scaffold0597 (39-113)||(836-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (39-113)||(9840-9914)
[»] scaffold0302 (1 HSPs)
scaffold0302 (39-113)||(12418-12492)
[»] scaffold0266 (2 HSPs)
scaffold0266 (39-113)||(1430-1504)
scaffold0266 (39-113)||(3466-3540)
[»] scaffold0058 (1 HSPs)
scaffold0058 (39-113)||(57350-57424)
[»] scaffold0025 (2 HSPs)
scaffold0025 (39-113)||(9160-9234)
scaffold0025 (39-113)||(146906-146980)
[»] scaffold0012 (2 HSPs)
scaffold0012 (39-113)||(34033-34107)
scaffold0012 (39-113)||(247324-247398)
[»] scaffold0004 (1 HSPs)
scaffold0004 (39-113)||(193355-193429)
[»] scaffold0063 (1 HSPs)
scaffold0063 (212-261)||(44142-44191)
[»] scaffold0057 (1 HSPs)
scaffold0057 (212-261)||(6061-6110)
[»] scaffold0215 (2 HSPs)
scaffold0215 (20-95)||(9203-9279)
scaffold0215 (20-95)||(16101-16177)


Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 7 - 261
Target Start/End: Complemental strand, 16523252 - 16522997
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16523252 tagcaaagggggaaaacttgaagattggagaattatgagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatca 16523153  T
Q  107 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16523152 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctctt 16523053  T
Q  207 g-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16523052 gttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 16522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 8045365 - 8045123
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattgt 119  Q
    |||||||||||||| ||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  8045365 aaacttgaagattgaagaattaggagctaaagtgaagtctaagtttgaattaatcataacctaaggtaagggggttagtcttcatcataatcataattgt 8045266  T
Q  120 ttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgataa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  8045265 ttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattaagtgagaatttatatgaacccaatctctaattttcgtgctcttgttttggtgataa 8045166  T
Q  219 gtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  8045165 gtttgagtatgttaattgaatgataaatgaattgttggtgatg 8045123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 32460537 - 32460784
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| |||||| ||||||||||     
T  32460537 gggggaaacttgaagattgaagaattaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatg 32460636  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| || ||| ||||||||||||||| | | |||||| |||||| |||||    
T  32460637 attgttttgtttgcaa-ttttcttggattgtatgaaatagtgcttaattgagtaagtatttatatgaacccaatctttgaatttcgtgctcttgttttgg 32460735  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    | |||| |||||||||||||||||||||||||||||||||||| |||||    
T  32460736 ttataattttgagtatgttaattgaatgataaatgaattgttggtgatg 32460784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 14500046 - 14500293
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||||||| |||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| | ||||||||||||||||    
T  14500046 gggggaaacttgaagattgaagaattatgagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttaggcttcatcataatcata 14500145  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| |||| |||||| ||||||| ||||||||||||||||||||  |||||| || ||| ||||||||||||||| | | |||||| |||||| |||||    
T  14500146 attgttttgcttgcaa-ttttctttgtttgtatgaaaaagtgcttgtttgagtaagtatttatatgaacccaatctttgaatttcgtgctcttgttttgg 14500244  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  14500245 tgataagtttgagtatgttaatttaatgataaatgaattattggtgatg 14500293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 9795639 - 9795533
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||    
T  9795639 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatca 9795540  T
Q  107 taatcat 113  Q
    |||||||    
T  9795539 taatcat 9795533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 19020899 - 19020793
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||   |||||    
T  19020899 tagcaaaagggggaaacttgaagattggagaattaggagctaaggtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttaccatca 19020800  T
Q  107 taatcat 113  Q
    |||||||    
T  19020799 taatcat 19020793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 19697217 - 19697346
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg- 118  Q
    |||||||||||||| ||||||||||| |||||||||||  |||| |||||| |||||||||||||||||||||||| || ||| |||||||||| ||||     
T  19697217 aaacttgaagattgaagaattaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgt 19697316  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||||||||||| ||||  ||||||||||    
T  19697317 tttgtttgcaattttccttg--ttgtatgaaa 19697346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 19707802 - 19707931
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg- 118  Q
    |||||||||||||| ||||||||||| |||||||||||  |||| |||||| |||||||||||||||||||||||| || ||| |||||||||| ||||     
T  19707802 aaacttgaagattgaagaattaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgt 19707901  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||||||||||| ||||  ||||||||||    
T  19707902 tttgtttgcaattttccttg--ttgtatgaaa 19707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 9295953 - 9295879
Alignment:
Q  182 cccaatctctaattttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttg 255  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9295953 cccaatctctaattttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttg 9295879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 9795461 - 9795395
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9795461 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattcttggtgatg 9795395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 22738675 - 22738577
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | |||||||||||||||||||||||||||||||||    
T  22738675 gggggaaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 22738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 14996359 - 14996306
Alignment:
Q  208 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14996359 tttggtgataagtttgagtatgttaattgaatgataaaagaattgttggtgatg 14996306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 19697383 - 19697442
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgtt 254  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19697383 ttcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatgaattgtt 19697442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 19707968 - 19708027
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgtt 254  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19707968 ttcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatgaattgtt 19708027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 15674967 - 15675041
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  |||||    || ||||||| |||||||||||||||| |||||||||||||||||    
T  15674967 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 15675041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 40885418 - 40885491
Alignment:
Q  40 taggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| |  ||||||||||||||    
T  40885418 taggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagaattcatcataatcat 40885491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 55376452 - 55376525
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||| ||||||  |||||||  |||||| | | |||||||||||||||| ||||||||||||||||    
T  55376452 ttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaagggggttagtcttcatcataatca 55376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 10104128 - 10104202
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| ||||  |||||    || ||||||| |||||||||||||||| |||||||||||||||||    
T  10104128 ttaggagctaaagtaaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 10104202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 15135865 - 15135939
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  15135865 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 15272169 - 15272243
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  15272169 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 18248624 - 18248543
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtt 95  Q
    |||| |||||||||||||| || ||||||||| |||||||||||| |||||   ||| ||||| | ||||||||||||||||    
T  18248624 gggggaaacttgaagattgaagcaattaggagttaaagtgaagcttaagttaagattaatcatcatctaaggtaagggggtt 18248543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 33241052 - 33241011
Alignment:
Q  72 atcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  33241052 atcataatctaaggtaagggggttagtcttcatcataatcat 33241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 34177668 - 34177716
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgat 260  Q
    |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  34177668 gtgatatgtttgagtatgttaattacatgataattgaattgttgatgat 34177716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 31132699 - 31132628
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataat 110  Q
    ||||||||||||||| |||  |||||    || ||||||| |||||||||||||||| ||||||||||||||    
T  31132699 ttaggagctaaagtggagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataat 31132628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 13246811 - 13246737
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  13246811 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 13246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 54118168 - 54118200
Alignment:
Q  81 taaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||| |||||||||||||||||    
T  54118168 taaggtaagggggttagtcttcatcataatcat 54118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 216; Significance: 1e-119; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 61048 - 61303
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  61048 tagcaaagggggaaaacttgaagattggagaattatgagctaaagttaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatca 61147  T
Q  107 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||| |||||    
T  61148 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaatttgtatgaacccaatctttaattttcgtgctctt 61247  T
Q  207 g-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  61248 gttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 61303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 48977 - 48903
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| ||||  ||||||  ||||| ||| |||||||||||||||||| ||||| |||||||||||    
T  48977 ttaggagctaaagtaaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatcat 48903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 18823209 - 18823464
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  18823209 tagcaaagggggaaaacttaaagattggagaattaggagctaaagtgaagtttaagtttggattaatcataacctaaggtaagggggttagtcttcatca 18823308  T
Q  107 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  18823309 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaagtgagtgagaattcatatgaacccaatctctaattttcgtgctctt 18823408  T
Q  207 g-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18823409 gttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 18823464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 261
Target Start/End: Original strand, 18839064 - 18839319
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  18839064 tagcaaagggggaaaacttaaagattggagaattagaagctaaagtgaagcttaagtttggattaatcataacctaaggtaagggggttagtcttcatca 18839163  T
Q  107 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18839164 taatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctctt 18839263  T
Q  207 g-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  18839264 gttttggtgataagtttgagtatgttaactgaatgataaatgaattgttggtgatg 18839319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 261
Target Start/End: Original strand, 32276601 - 32276840
Alignment:
Q  23 cttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg-ttt 121  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| |||||||||||||||||||||| |||    
T  32276601 cttgaagattgaagaattaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattgtttt 32276700  T
Q  122 gtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgataagt 220  Q
    |||||||| |||||||  ||||||||||||||||||||||||||  || ||| || |||||||||||| | | |||||| |||||| |||||||||||||    
T  32276701 gtttgcaa-ttttctttatttgtatgaaaaagtgcttaattgagcaagtatttatctgaacccaatctttgaatttcgtgctcttgttttggtgataagt 32276799  T
Q  221 ttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  32276800 ttgagtatgttaattgaatgataaatgaattgttggtgatg 32276840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 19629740 - 19629612
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg- 118  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||     
T  19629740 aaacttgaagattggagaattaggagctaa-gtgaagctcaaatttgaattgatcataacctaaggtaagggggttagtgttcttcataatcatgattgt 19629642  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||| |||||| ||||  ||||||||||    
T  19629641 tttgtttggaattttccttg--ttgtatgaaa 19629612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 16299825 - 16299953
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattgt 119  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| |||||| || ||||||| |||||    
T  16299825 aaacttgaagattgaagaattaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcttaatcatgattgt 16299924  T
Q  120 ttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||||||||| ||||  ||||||||||    
T  16299925 ttgtttgcaattttccttg--ttgtatgaaa 16299953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 13620644 - 13620743
Alignment:
Q  15 ggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||| |||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  13620644 ggggaaaacttgaagattgaagaaattaggagctaaagtgaagcctgagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 13620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 16299991 - 16300057
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16299991 ttcgtgctcttgtttcggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 16300057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 19629575 - 19629509
Alignment:
Q  196 ttcgtactcttgtt-tggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19629575 ttcgtgctcttgttgtggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 19629509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 15742058 - 15742150
Alignment:
Q  20 aaacttgaagattggagaatt-aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatc 111  Q
    |||||||||||||| || ||| |||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| ||||| |||||||||    
T  15742058 aaacttgaagattgaaggatttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 18002333 - 18002427
Alignment:
Q  20 aaacttgaagattggagaatt-aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| || ||| ||||||||||||||||   ||||||  ||| |||||||||||||||||||||||| ||||| |||||||||||    
T  18002333 aaacttgaagattgaaggatttaggagctaaagtgaaggctaagtttagattaatcataacctaaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 26090133 - 26090059
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||||  ||||| ||| |||||||||||||||||| ||||| |||||||||||    
T  26090133 ttaggagctaaagtgaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23148377 - 23148303
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | |||||||||||||||||| |||||||||||||||||    
T  23148377 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcat 23148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23153828 - 23153754
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | |||||||||||||||||| |||||||||||||||||    
T  23153828 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcat 23153754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 27751816 - 27751742
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||||| ||| ||| | | |||||||||||||||| |||||||||||||||||    
T  27751816 ttaggagctaaattgaagcctaagtttggattaatctttatctaaggtaagggggttagtcttcatcataatcat 27751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 35009314 - 35009384
Alignment:
Q  43 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||  ||||||| ||| ||||| | |||| ||||||||||| |||||||||||||||||    
T  35009314 gagctaaagtgaagccaaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcat 35009384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23995321 - 23995247
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  23995321 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 29666255 - 29666181
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||||| ||| ||||| | ||||  |||| ||||| |||||||||||||||||    
T  29666255 ttaggagctaaattgaagcctaagtttggattaatcattatctaacataagtgggttagtcttcatcataatcat 29666181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 1657660 - 1657693
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||| |||||||||||||||||    
T  1657660 ctaaggtaagggggttagtcttcatcataatcat 1657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 15862822 - 15862789
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||| |||||||||||||||||    
T  15862822 ctaaggtaagggggttagtcttcatcataatcat 15862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 15889734 - 15889783
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| ||| ||||||||||||    
T  15889734 gtgatatgtttgagtatgttaatttgatgataattgatttgttgatgatg 15889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 22585574 - 22585623
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||| ||||||  ||||||| ||||||||||||||||    
T  22585574 gtgatatgtttgagtattttaatttgatgataattgaattgttgatgatg 22585623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 22590405 - 22590454
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||| ||||||  ||||||| ||||||||||||||||    
T  22590405 gtgatatgtttgagtattttaatttgatgataattgaattgttgatgatg 22590454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 16933803 - 16934050
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  16933803 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtctttatcataatcata 16933902  T
Q  115 attgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |    
T  16933903 attgttagtttgcaatttttcttggtttgtatgaaaaagtgcttaattaagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttgat 16934002  T
Q  214 gataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16934003 gataagattgagtatgttaattgaatgataaatgaattgttggtgatg 16934050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 14285387 - 14285140
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  14285387 gggggaaacttgaagattgaagaattaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcata 14285288  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||||| || ||| |||||||||||| |  | | |||||| |||||| |||||    
T  14285287 attgttttgtttgcaa-ttttcttggtttgtatgaaatagtgcttaattgagtaagtatttatatgaacccaacccttgaatttcgtgctcttgttttgg 14285189  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14285188 tgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 14285140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 19947120 - 19946877
Alignment:
Q  20 aaacttgaagattggagaatt-aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    |||||||||||||| || ||| ||||| |||||||||||  ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19947120 aaacttgaagattgaaggatttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattg 19947021  T
Q  119 tttgttt-gcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgat 216  Q
    ||||||| |||||||| |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||| | | |||||| |||||| |||||||||    
T  19947020 tttgttttgcaatttt-cttggtttgtttgaaaaaatgcttaattgagtaagaatttatatgaacccaatctttgaatttcgtgctcttgttttggtgat 19946922  T
Q  217 aagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || |||||||||||||||||||||||||||||||||||| |||||    
T  19946921 aaatttgagtatgttaattgaatgataaatgaattgttggtgatg 19946877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 12901933 - 12902039
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||    
T  12901933 tagcaaagggggaaaatttgaagattggagaattaggagttaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatca 12902032  T
Q  107 taatcat 113  Q
    |||||||    
T  12902033 taatcat 12902039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 15938320 - 15938426
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||| |    
T  15938320 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcatagcctaaggtaagggggttagttatcatta 15938419  T
Q  107 taatcat 113  Q
    |||||||    
T  15938420 taatcat 15938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 15936478 - 15936584
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||| ||  |||| |    
T  15936478 tagcaaagggggaaaacttgaagattggagaattaggagcaaaagtgaagctcaagtttgaattgatcgtagcctaaggtatgggggttagttatcatta 15936577  T
Q  107 taatcat 113  Q
    |||||||    
T  15936578 taatcat 15936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 11477029 - 11477163
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||     
T  11477029 gggggaaacttgaagattgaagaattaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcttcataatcatg 11477128  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||| ||||||||||||||| ||||  ||||||||||    
T  11477129 attgttttgtttgcaattttccttg--ttgtatgaaa 11477163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 9302968 - 9303036
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcat 76  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9302968 tagcaaagggggaaa-cttgaagattggagaattaggagttaaagtgaagctcaagtttgaattgatcat 9303036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 9303110 - 9303176
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9303110 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 9303176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 8268755 - 8268821
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  8268755 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatg 8268821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 8275855 - 8275921
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  8275855 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatg 8275921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 11477201 - 11477259
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgt 253  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  11477201 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgatttgt 11477259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 11986038 - 11986112
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||||| ||| ||||| | |||||||||||||||| |||||||||||||||||    
T  11986038 ttaggagctaaattgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 11986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 16261851 - 16261777
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| ||||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  16261851 ttaggagctaaagtgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 54651838 - 54651764
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||| || ||||||  |||||||  || ||||| | ||||||||||||||||||||||||||||||||||    
T  54651838 ttaggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtcttcatcataatcat 54651764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 51960990 - 51961063
Alignment:
Q  40 taggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||| ||||||||||   ||||||| ||| ||||| | |||||||||||||||| |||||||||||||||||    
T  51960990 taggaggtaaagtgaagtctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 44229391 - 44229293
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| |||||||||||||| || ||||||||| ||||||||| |  |||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  44229391 gggggaaacttgaagattgaagcaattaggagataaagtgaaacctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 44229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 53771439 - 53771365
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  53771439 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 2050189 - 2050115
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  2050189 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 2050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 38168311 - 38168237
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  38168311 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 38168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 13839233 - 13839200
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||| |||||||||||||||||    
T  13839233 ctaaggtaagggggttagtcttcatcataatcat 13839200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 15550825 - 15550776
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| |||||| |||||||||    
T  15550825 gtgatatgtttgagtatgttaatttgatgataattgaatttttgatgatg 15550776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 48421804 - 48421755
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| |||||||||| |||||    
T  48421804 gtgatatgtttgagtatgttaatttgatgataattgaattgttggtgatg 48421755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 15857163 - 15857195
Alignment:
Q  81 taaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||| |||||||||||||||||    
T  15857163 taaggtaagggggttagtcttcatcataatcat 15857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 9730216 - 9730459
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9730216 aaacttgaagattgaagcaattaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataattg 9730315  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgata 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  9730316 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttggtgata 9730415  T
Q  218 agtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || ||||||||||||||||||||||||||||||||||| |||||    
T  9730416 agattgagtatgttaattgaatgataaatgaattgttggtgatg 9730459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 108686 - 108909
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttg 138  Q
    ||||||| |||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  108686 ttaggaggtaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 108785  T
Q  139 gtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgataagtttgagtatgttaattga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  108786 gtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatccctaattttcgtgctcttgttttggtgataagtttgagtatgttaattga 108885  T
Q  238 atgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||| |||||    
T  108886 atgataaatgaattgttggtgatg 108909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 7529326 - 7529079
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||| ||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| |||||| |||||||||||    
T  7529326 gggggaaacttgaagattgaagaattgggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcata 7529227  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||||| || ||| |||||||||||| |  | | |||||| |||||| |||||    
T  7529226 attgttttgtttgcaa-ttttcttggtttgtatgaaatagtgcttaattgagtaagtatttatatgaacccaacccttgaatttcgtgctcttgttttgg 7529128  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7529127 tgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 7529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 17909921 - 17909787
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||||||||||| |||||||||||  ||||||| ||| |||||||||||||||||||||||| || ||| ||||||||||     
T  17909921 gggggaaacttgaagattgaagaattaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtgttcttcataatcatg 17909822  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||| |||||| |||||||| ||||  ||||||||||    
T  17909821 attgttttgttagcaattttccttg--ttgtatgaaa 17909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 34939688 - 34939595
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| ||||||||||||||||||||||   |||| |||||| |||||||||||||||||||||||| || ||| ||||||||||    
T  34939688 aaacttgaagattgaagaattaggagctaaagtgaagtctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 34939595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 17909750 - 17909684
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17909750 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 17909684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 25005210 - 25005137
Alignment:
Q  40 taggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||  ||||||| ||| ||||| | |||| ||||||||||| |||||||||||||||||    
T  25005210 taggagctaaagtgaagcctaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcat 25005137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 27182429 - 27182503
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | |||||||||||||||||| |||||||||||||||||    
T  27182429 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcat 27182503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 18530946 - 18531018
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatc 111  Q
    |||||||||||||||||||  |||||    || ||||||| |||||||||||||||| |||||||||||||||    
T  18530946 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 18531018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 22053711 - 22053785
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||   |||||    || ||||||| |||||||||||||||| |||||||||||||||||    
T  22053711 ttaggagctaaagtgaagtctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 22053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 23507344 - 23507270
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||| |||||||||||  ||||| ||||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  23507344 ttaggagttaaagtgaagcataagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 23507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 32951086 - 32951016
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataa 109  Q
    |||||||||||| |||||   ||||||||||| ||||| |  ||||||||||||||| |||||||||||||    
T  32951086 ttaggagctaaattgaagtctaagtttgaattaatcattatttaaggtaagggggttagtcttcatcataa 32951016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 23981363 - 23981440
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataat 116  Q
    |||||||||||| ||||||  ||||||| ||| ||| | | || ||||||||||||| |||||||||| |||||||||    
T  23981363 ttaggagctaaattgaagcctaagtttggattaatcttcatcttaggtaagggggttagtcttcatcaaaatcataat 23981440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 2032207 - 2032135
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatc 111  Q
    |||||||||||| ||||||  |||||||  || ||| | | |||||||||||||||| || ||||||||||||    
T  2032207 ttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatcataatc 2032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 3431114 - 3431357
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3431114 aaacttgaagattgaagcaattaggagctaaagtgaagcccaagtttggattgatcataacctaaggtaagggggttagtcttcatcataatcataattg 3431213  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgata 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  3431214 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttggtgata 3431313  T
Q  218 agtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || ||||||||||||||||||||||||||||||||||| |||||    
T  3431314 agattgagtatgttaattgaatgataaatgaattgttggtgatg 3431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 22886753 - 22886505
Alignment:
Q  15 ggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| |||| |||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||| ||||| |||||||||||    
T  22886753 gggggaaacttgaagattgaagaaattaggagctaaagtgaagcttaagtttggattaatcattacctaaggtaagggggttagtcttaatcataatcat 22886654  T
Q  114 aattgtttgttt-gcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttg 211  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| | | |||||| |||||| ||||    
T  22886653 aattgttttttttgcaatttt-cttggtttgtatgaaaaagtgcttaattgagtaagaatttatatgaatccaatctttgaatttcgtgctcttgttttg 22886555  T
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22886554 gtaataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 22886505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 21494290 - 21494537
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| |||||| ||||||||||     
T  21494290 ggggtaaacttgaagattgaagaattaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatg 21494389  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||||| || ||| ||||||||||||||| | | |||||| |||||| |||||    
T  21494390 attgttttgtttgcaa-ttttcttggtttgtatgaaatagtgcttaattgagtaagtatttatatgaacccaatctttgaatttcgtgctcttgttttgg 21494488  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21494489 tgataattttgagtatgttaattgaatgataaatgaattgttggtgatg 21494537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 16038713 - 16038839
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16038713 tagcaaagggggaaa-cttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 16038811  T
Q  107 taatcataattg-tttgtttgcaatttt 133  Q
    ||||||| |||| |||||||||||||||    
T  16038812 taatcatgattgttttgtttgcaatttt 16038839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 2545371 - 2545229
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  2545371 tagcaaagggggaaaacttgaagattgaagaattaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtcttcatca 2545272  T
Q  107 taatcataattg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||| |||| ||||||||||||||| ||||  ||||||||||    
T  2545271 taatcatgattgttttgtttgcaattttccttg--ttgtatgaaa 2545229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 22147849 - 22147720
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg- 118  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||||     
T  22147849 aaacttgaagattgaagaattaggagctaaggtgaagctcaagtttgaattgatcataacctaaggtaaggggtttagtgttcttcataatcatgattgt 22147750  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||| ||||||| ||||  ||||||||||    
T  22147749 tttgttttcaattttccttg--ttgtatgaaa 22147720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 18612815 - 18612688
Alignment:
Q  22 acttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg-tt 120  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || ||| ||| |||||| |||| ||    
T  18612815 acttgaagattgaagaattaggagctaaagtgaagcccaaatttgaattgatcataacctaaggtaagggggttagtgttcttcacaatcatgattgttt 18612716  T
Q  121 tgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||||||||| ||||  ||||||||||    
T  18612715 tgtttgcaattttccttg--ttgtatgaaa 18612688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 16038892 - 16038958
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16038892 ttcgtgctcttgttttggtgagaagtttgagtatgttaattgaatgataaatgaattgttgatgatg 16038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 18612651 - 18612585
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18612651 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 18612585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 18619556 - 18619490
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18619556 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 18619490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 22147683 - 22147617
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22147683 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 22147617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 2545178 - 2545125
Alignment:
Q  208 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2545178 tttggtaataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 2545125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 24385610 - 24385684
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  24385610 ttaggagctaaagtgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 43373350 - 43373424
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  43373350 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 43373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 16404900 - 16404942
Alignment:
Q  81 taaggtaagggggtttgtcttcatcataatcataattgtttgt 123  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||    
T  16404900 taaggtaagggggttagtcttcatcataatcatcattatttgt 16404942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 22907127 - 22907196
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||||||||||| ||||| |||||||||||  ||  || ||||||||||||| || |||||||||||    
T  22907127 ctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttgtatgaaa 22907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 21259519 - 21259568
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| |||||| |||||||||    
T  21259519 gtgatatgtttgagtatgttaatttgatgataattgaatttttgatgatg 21259568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 371511 - 371268
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    ||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  371511 aaacttgaatattgaagcaattaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataattg 371412  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgata 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  371411 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttggtgata 371312  T
Q  218 agtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || ||||||||||||||||||||||||||||||||||| |||||    
T  371311 agattgagtatgttaattgaatgataaatgaattgttggtgatg 371268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 18253685 - 18253792
Alignment:
Q  7 tagcaaagggggaaaa-cttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatc 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||     
T  18253685 tagcaaagggggaaaaacttgaagattggagaattaggagctaaagtgaagctcaaatttgaattgatcataacctaaggtaagggggttagttatcatt 18253784  T
Q  106 ataatcat 113  Q
    ||||||||    
T  18253785 ataatcat 18253792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 15862332 - 15862226
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| ||  | ||||    
T  15862332 tagcaaagggggaaaacttgaagattggagaattaggagttaagttgaagctcaagtttgaattgatcataacctaaggtaagggggttagttattatca 15862233  T
Q  107 taatcat 113  Q
    |||||||    
T  15862232 taatcat 15862226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 47480878 - 47480977
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||||||||||| |||||||||||  ||||||| ||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  47480878 gggggaaacttgaagattgaagaattaggaggtaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcata 47480977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 10000225 - 10000318
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | |||||||||||||||||||||||||||||||||    
T  10000225 aaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 10000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 13321408 - 13321334
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  | ||||| ||| ||||| | |||||||||||||||| |||||||||||||||||    
T  13321408 ttaggagctaaagtgaagcctaggtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 13321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 25124524 - 25124450
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||||  ||| ||||| | |||||||||||||||| |||||||||||||||||    
T  25124524 ttaggagctaaagtgaagcctaagtttagattaatcattatctaaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 48622521 - 48622614
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  48622521 aaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 48622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 16418903 - 16418805
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| |||||||||||||| |  ||||||||||||||||||||||  ||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  16418903 gggggaaacttgaagattgaaacaattaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 16418805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 2029318 - 2029244
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| ||||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  2029318 ttaggagctaaattgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 36053045 - 36052971
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  36053045 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 36052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 42056146 - 42056220
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  42056146 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 39291537 - 39291586
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||    
T  39291537 gtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatg 39291586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 7293366 - 7293297
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||||||||||| ||||| |||||||||||  ||  || ||||||||||||| || |||||||||||    
T  7293366 ctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttgtatgaaa 7293297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 11580619 - 11580693
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| ||| ||||||||||||| || ||||| |||||||||||    
T  11580619 ttaggagctaaattgaagcctaagttgggattaatcttaatctaaggtaaggggattagtctttatcataatcat 11580693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 13036896 - 13036970
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||||| |||||||||    
T  13036896 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcaccataatcat 13036970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 15709543 - 15709469
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  |||||    || ||||||| |||||||||| || || |||||||||||||||||    
T  15709543 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagaggattagtcttcatcataatcat 15709469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 16212145 - 16212071
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  16212145 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 16212071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 30262042 - 30262111
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||||||||||| ||||| |||||||||||  ||  || ||||||||||||| || |||||||||||    
T  30262042 ctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttgtatgaaa 30262111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 6043 - 6292
Alignment:
Q  15 ggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  6043 ggggaaaacttgaagattgaagaaattaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttaaacataatcat 6142  T
Q  114 aattgtttgtttgcaatttttcttggtttgtatgaaaaagtgctta-attgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6143 aattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttagtttaagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttg 6242  T
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  6243 gtgataagattgagtatgttaattgaatgataaatgaattgttggtgatg 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 39 - 261
Target Start/End: Complemental strand, 33128446 - 33128223
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttg 138  Q
    |||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33128446 ttaggagctaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 33128347  T
Q  139 gtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgataagtttgagtatgttaattga 237  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33128346 gtttgtatgaaaaagtgcttaattgagtgagaatttttatgaacccaatctttaattttcgtgctcttgttttggtgataagtttgagtatgttaattga 33128247  T
Q  238 atgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||| |||||    
T  33128246 atgataaatgaattgttggtgatg 33128223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 17204753 - 17204510
Alignment:
Q  20 aaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    |||||||||||||| |||| ||||||| ||||||||||   ||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  17204753 aaacttgaagattgaagaaattaggagttaaagtgaagtctaagtttggattaatcataacctaaagtaagggggttagtcttcatcataatcataattg 17204654  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttggtgata 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  17204653 tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtgctcttgttttggtgata 17204554  T
Q  218 agtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    || |||||||||||||||| || ||||||||||||||| |||||    
T  17204553 agattgagtatgttaattgcatcataaatgaattgttggtgatg 17204510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 82 - 261
Target Start/End: Original strand, 24826615 - 24826795
Alignment:
Q  82 aaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaa 181  Q
    ||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24826615 aaggtaaaggggttagtcatcatcataatcataattgtttgcttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaa 24826714  T
Q  182 cccaatctctaattttcgtactcttg-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24826715 cccaatctctaattttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 24826795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 28031068 - 28031315
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||     
T  28031068 gggggaaacttgaagattgaagaattaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcatcataatcatg 28031167  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||  || ||| ||||||||||||||| | | |||||| |||||| |||||    
T  28031168 attgttttgtttgcaa-ttttcttggtttgtatgagaaagtgcttaattgagcaagtatttatatgaacccaatctttgaatttcgtgctcttgttttgg 28031266  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  28031267 tgataagttttagtatgttaattgattgataaatgaattgttggtgatg 28031315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 7507683 - 7507789
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7507683 tagcaaagggggaaagcttgaagattggagaattaggagttaaagtgaaactcaagtttgaattgatcataacctaaggtaagggggttagtcttcatca 7507782  T
Q  107 taatcat 113  Q
    |||||||    
T  7507783 taatcat 7507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 23777888 - 23777994
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||  ||||||    
T  23777888 tagcaaagggggaaaactagaagattggagaattaggagctaaagtgaagctcaaatttgaattgatcataacctaaggtaaaggggttagttatcatca 23777987  T
Q  107 taatcat 113  Q
    |||||||    
T  23777988 taatcat 23777994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 15633459 - 15633392
Alignment:
Q  195 tttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15633459 tttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 15633392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 5888480 - 5888578
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| ||||||||||||||  | |||||||||||||||||||||| |||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  5888480 gggggaaacttgaagattgacgcaattaggagctaaagtgaagcttaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 5888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 21142301 - 21142203
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  21142301 gggggaaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 21142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 25265261 - 25265335
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  | ||||| ||| ||||| | |||| ||||||||||| |||||||||||||||||    
T  25265261 ttaggagctaaagtgaagcctaggtttggattaatcattatctaatgtaagggggttagtcttcatcataatcat 25265335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 24341267 - 24341341
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  |||||    || ||||||| |||||||||||||||| |||||||||||||||||    
T  24341267 ttaggagctaaaatgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 24341341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 22284180 - 22284133
Alignment:
Q  214 gataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||| |||||| |||||||||| |||| ||||||||||||||||||||    
T  22284180 gatatgtttgaatatgttaatttaatgttaaatgaattgttgatgatg 22284133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 463117 - 463043
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  463117 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 463043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 19689315 - 19689383
Alignment:
Q  81 taaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||||||||||| ||||| |||||||||||  ||  || ||||||||||||| || |||||||||||    
T  19689315 taaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttgtatgaaa 19689383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 32466249 - 32466177
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||| ||||||  |||||||  |||||| | | ||||||||| |||||| ||||||||||||||||    
T  32466249 ttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaa-ggggttagtcttcatcataatca 32466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 19794629 - 19794661
Alignment:
Q  81 taaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||| |||||||||||||||||    
T  19794629 taaggtaagggggttagtcttcatcataatcat 19794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 5647 - 5400
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||||||||||||| |||||| |||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||     
T  5647 gggggaaacttgaagattgaagaattaggagctaaaatgaagcccaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcatg 5548  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| | | |||||| |||||| |||||    
T  5547 attgttttgtttgcaa-ttttcttggtttgtatgaaaaagtgcttaattgagtaagaatttatatgaacccaatctttgaatttcgtgctcttgttttgg 5449  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  5448 tgataagtttgagtatgttaattgattgataaatgaattgttggtgatg 5400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 80 - 261
Target Start/End: Original strand, 17208 - 17390
Alignment:
Q  80 ctaaggtaagggggtttgtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatg 179  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  17208 ctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaatttgtatg 17307  T
Q  180 aacccaatctctaattttcgtactcttg-tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  17308 aacccaatctttaattttcgtactcttgttttggtgataagtatgagtatgttaattgaatgataaatgaattgttggtgatg 17390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 18124 - 17877
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||| ||||||||| ||||||||||| |||||||||||  ||||||| ||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  18124 gggggaaacatgaagattgaagaattaggagttaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcata 18025  T
Q  115 att-gtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||  ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||| ||||||||||||||| | | |||||| |||||| |||||    
T  18024 attattttgtttgcaa-ttttctttgtttgtatgaaaaagtgcttaattgagtaagtatttatatgaacccaatctttgaatttcgtgctcttgttttgg 17926  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17925 tgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 17877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 5411 - 5657
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| ||| |||||||||||||||||||  ||| ||| ||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  5411 gggggaaacttgaagattgaaga-ttaggagctaaagtgaagcctaagattggattaatcattacctaaggtaagggggttagtcttcatcataatcata 5509  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||| |||||| ||||||| | ||||| | | |||||| |||||| |||||    
T  5510 attgttttgtttgcaa-ttttcttagtttgtaagaaaaagtgcttaattgagtaagaatttatatgaatctaatctttgaatttcgtgctcttgttttgg 5608  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5609 tgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 21649967 - 21650116
Alignment:
Q  113 taattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  21649967 taattgtttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaactcaatctctaattttcgtgctcttgttttg 21650066  T
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  21650067 gtgataagattgagtatgttaattgaatgataaatgaattgttggtgatg 21650116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 20254736 - 20254595
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    ||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||    
T  20254736 tagcaaagggggaaa-cttgaagattgaggaattatgagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtgttcttca 20254638  T
Q  107 taatcataattg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||| |||| ||||||||||||||| ||||  ||||||||||    
T  20254637 taatcatgattgttttgtttgcaattttccttg--ttgtatgaaa 20254595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 20254545 - 20254492
Alignment:
Q  208 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20254545 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 20254492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 20893509 - 20893583
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | |||||||||||||||||| |||||||||||||||||    
T  20893509 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcat 20893583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 20913409 - 20913335
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| ||| |||||||    
T  20913409 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcgtaatcat 20913335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 34242 - 34489
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||| ||||||| |||||||||||||||| ||||||  ||||||| ||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  34242 gggggaaacttaaagattgaagaattaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcata 34341  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaaaagtgcttaattgagtgagaattcatatgaacccaatctctaattttcgtactcttg-tttgg 212  Q
    |||| ||||||||||| ||||||| |||||||||||| ||||||||||||||| || ||| ||| ||||| ||||  | | |||||| |||||| |||      
T  34342 attgttttgtttgcaa-ttttcttagtttgtatgaaatagtgcttaattgagtaagtatttatacgaacctaatccttgaatttcgtgctcttgttttaa 34440  T
Q  213 tgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34441 tgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 34489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 13201 - 13299
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  13201 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatcataatcat 13299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 108033 - 108107
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||| || ||||||  ||||| ||||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  108033 ttaggagctgaattgaagcctaagttggaattaatcttcatctaaggtaagggggttagtctttatcataatcat 108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 9345 - 9480
Alignment:
Q  15 ggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  9345 gggggaaacttgaagattgaagaaattaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 9444  T
Q  114 aattg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
     |||| ||||||||||||||| ||||  ||||||||||    
T  9445 gattgttttgtttgcaattttccttg--ttgtatgaaa 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 9518 - 9584
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  9518 ttcgtgctcttgttttggtgataagtttgagtatgttaattgattgctaaatgaattgttgatgatg 9584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 77; Significance: 8e-36; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 164810 - 164939
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg- 118  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| || ||| |||||||||| ||||     
T  164810 aaacttgaagattgaagaattaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgt 164909  T
Q  119 tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    ||||||||||||||| ||||  ||||||||||    
T  164910 tttgtttgcaattttccttg--ttgtatgaaa 164939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 164976 - 165042
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  164976 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 172284 - 172210
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  172284 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 177987 - 177913
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  177987 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 108159 - 108053
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatca 106  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||  |||| |    
T  108159 tagcaaagggggaaattttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgattatagcctaaggtaagggggttagttatcatta 108060  T
Q  107 taatcat 113  Q
    |||||||    
T  108059 taatcat 108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 49686 - 49820
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcata 114  Q
    |||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| |||||| ||||||||||     
T  49686 gggggaaacttgaagattgaagaattaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatg 49785  T
Q  115 attg-tttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||| ||||||||||||||| ||||  ||||||||||    
T  49786 attgttttgtttgcaattttccttg--ttgtatgaaa 49820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 49871 - 49924
Alignment:
Q  208 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49871 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 49924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 48610 - 48468
Alignment:
Q  7 tagcaaagggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatc 105  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| |||||| ||    
T  48610 tagcaaagggggaaa-cttgaagattgaagaaattaggagctaaagtgaagcccaaatttgaattaatcataacctaatgtaagggggttagtcttcttc 48512  T
Q  106 ataatcat-aattgtttgtttgcaatttttcttggtttgtatgaaa 150  Q
    |||||||| |||  ||||||||||||||| ||||  ||||||||||    
T  48511 ataatcatgaatgttttgtttgcaattttccttg--ttgtatgaaa 48468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 42063 - 41965
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||    
T  42063 gggggaaacttgaagattgaagaattaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcat 41965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 7034 - 7127
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| || ||| ||||||||||    
T  7034 aaacttgaagattgaagaattaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 7127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 34312 - 34405
Alignment:
Q  20 aaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||  | |||||||||||    
T  34312 aaacttgaagattggagaattaggagctaaagtgaagctcaagcttgaattgatcattacctaaggtaagagggttagttattatcataatcat 34405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 95392 - 95262
Alignment:
Q  20 aaacttgaagattggagaatt-aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcataattg 118  Q
    |||||||||||||| || ||| |||||||||||||||||  | ||||| ||| ||||| |||||||||||||||||| |||||| |||||||||| ||||    
T  95392 aaacttgaagattgaaggatttaggagctaaagtgaagcctaggtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatgattg 95293  T
Q  119 -tttgtttgcaatttttcttggtttgtatgaaa 150  Q
     ||||||||||||||| ||||  ||||||||||    
T  95292 ttttgtttgcaattttccttg--ttgtatgaaa 95262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 95223 - 95157
Alignment:
Q  196 ttcgtactcttgttt-ggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  95223 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 95157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 11976 - 11923
Alignment:
Q  208 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11976 tttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatg 11923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 12137 - 12063
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||||| ||| ||||| | ||||| |||||||||| |||||||||||||||||    
T  12137 ttaggagctaaattgaagccaaagtttggattaatcattatctaagataagggggttagtcttcatcataatcat 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 8051 - 8125
Alignment:
Q  40 taggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaa-gggggtttgtcttcatcataatcat 113  Q
    ||||||||||| ||||||  ||||||| ||| ||||| | ||||||||| ||||||| |||||||||||||||||    
T  8051 taggagctaaaatgaagcctaagtttggattaatcattatctaaggtaaggggggttagtcttcatcataatcat 8125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 4279 - 4378
Alignment:
Q  15 ggggaaaacttgaagattggagaatt-aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| || ||| |||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| | ||| |||||||||||    
T  4279 ggggtaaacttgaagattgaaggatttaggagctaaagtgaagcaaaagtttggattaatcattacctaaggtaagggggttagactttatcataatcat 4378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 3601 - 3505
Alignment:
Q  15 ggggaaaacttgaagattggagaattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| ||| |||||||||||||||||||  ||||||||||| ||||| | ||||||||| ||||||  ||||| ||||||||||    
T  3601 gggggaaacttgaagattgaaga-ttaggagctaaagtgaagcctaagtttgaattaatcatcatctaaggtaa-ggggttattcttcctcataatcat 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 45437 - 45338
Alignment:
Q  15 ggggaaaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| |||||||||||||| |||  ||||||||| || ||||||  ||||||| ||| | ||| | |||||||||||||||| |||||||||||||||||    
T  45437 gggggaaacttgaagattgaagagcttaggagcttaattgaagcctaagtttggattaaccattatctaaggtaagggggttagtcttcatcataatcat 45338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 54818 - 54724
Alignment:
Q  20 aaacttgaagattggagaa-ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||| |||  ||||||||| || ||||||| ||||||| ||| | ||| | ||||||||||| |||| |||||||||||||||||    
T  54818 aaacttgaagattgaagagcttaggagcttaattgaagcttaagtttggattaaccattatctaaggtaaggtggttagtcttcatcataatcat 54724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 13890 - 13824
Alignment:
Q  47 taaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||  ||||||| ||| ||||| | |||||||||||||||| |||||||||||||||||    
T  13890 taaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 13824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 7615 - 7517
Alignment:
Q  15 ggggaaaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||| |||||||||||||| |  ||||||||||||||||||||||  ||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  7615 gggggaaacttgaagattgaaacaattaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 7517  T

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Target: scaffold0160 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 412 - 339
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||| ||||||  ||||||| ||| ||| | | |||||||||||||||| ||||||||||||||||    
T  412 ttaggagctaaattgaagcctaagtttggattaatccttatctaaggtaagggggttagtcttcatcataatca 339  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 54275 - 54182
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||||| || |||||||||||| ||||||||  |||||   ||| | ||| | ||||||||||||||||||| |||||||||||||    
T  54275 aaacttgaagattgaagcaattaggagctatagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 54182  T

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Target: scaffold0498 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 9257 - 9183
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  9257 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 9183  T

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Target: scaffold0467 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 10218 - 10288
Alignment:
Q  43 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||  ||||| |  || ||||| | ||||||||||||||||||||||| ||||||||||    
T  10218 gagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcataatcat 10288  T

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Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 13243 - 13317
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  13243 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 13317  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 123045 - 123119
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | |||||||||||||||||| ||||||| |||||||||    
T  123045 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcaccataatcat 123119  T

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Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 333 - 284
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||    
T  333 gtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatg 284  T

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Target: scaffold0516 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 11982 - 12075
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||||| || |||||||||||||||||||||  |||||  |||| | ||| | |||||||||||||||| ||  | ||||||||||    
T  11982 aaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaaaattaaacatcatctaaggtaagggggttagttattatcataatca 12075  T

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Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 1529 - 1578
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||    
T  1529 gtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatg 1578  T

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Target: scaffold0158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 25605 - 25532
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatca 112  Q
    |||||||||||| ||||||  |||||||  || ||| | | |||||||||||||||| ||||||||||||||||    
T  25605 ttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagtcttcatcataatca 25532  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 272402 - 272330
Alignment:
Q  41 aggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  272402 aggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 272330  T

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Target: scaffold0597 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 836 - 910
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  836 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 910  T

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Target: scaffold0465 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 9840 - 9914
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  9840 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 9914  T

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Target: scaffold0302 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 12492 - 12418
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| |||   | |||||||||||||||| ||||| |||||||||||    
T  12492 ttaggagctaaagtgaagcctaagttaggattaatctctatctaaggtaagggggttagtctttatcataatcat 12418  T

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Target: scaffold0266 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 1504 - 1430
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  |||||   ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  1504 ttaggagctaaagtgaagcctaagttgtgattaatctttatctaaggtaagggggttagtctttatcataatcat 1430  T

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Target: scaffold0266; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 3466 - 3540
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| |||||  ||||||||||    
T  3466 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttgtcataatcat 3540  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 57350 - 57424
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||| ||||||||||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  57350 ttagtagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 57424  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 9234 - 9160
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  |||||    || ||||||| |||||||||| | ||| |||||||||||||||||    
T  9234 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagtgtgttagtcttcatcataatcat 9160  T

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Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 146980 - 146906
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  146980 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 146906  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 34033 - 34107
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||   ||||||  || ||| | | |||||||||||||||| |||||||||||||||||    
T  34033 ttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtcttcatcataatcat 34107  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 247324 - 247398
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  247324 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 247398  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 193355 - 193429
Alignment:
Q  39 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 113  Q
    |||||||||||||||||||  ||||| | ||| ||| | |  ||||||||||||||| ||||| |||||||||||    
T  193355 ttaggagctaaagtgaagcctaagttgggattaatcttcatttaaggtaagggggttagtctttatcataatcat 193429  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 44142 - 44191
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| |||||||||||||||||  ||| ||| ||||||||||||||||    
T  44142 gtgatatgtttgagtatgttaatttgatggtaattgaattgttgatgatg 44191  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 6110 - 6061
Alignment:
Q  212 gtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatg 261  Q
    |||||| ||||||||||||||| |  ||||||| ||||||||||||||||    
T  6110 gtgatatgtttgagtatgttaaattgatgataattgaattgttgatgatg 6061  T

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Target: scaffold0215 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 9203 - 9279
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtt 95  Q
    |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | ||||||||||||||||    
T  9203 aaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtt 9279  T

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Target: scaffold0215; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 16101 - 16177
Alignment:
Q  20 aaacttgaagattggag-aattaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtt 95  Q
    |||||||||||||| || |||||||||||||||||||||  |||||   ||| | ||| | ||||||||||||||||    
T  16101 aaacttgaagattgaagcaattaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtt 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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