View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17117_low_74 (Length: 259)
Name: NF17117_low_74
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17117_low_74 |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 55 - 243
Target Start/End: Original strand, 31630709 - 31630897
Alignment:
| Q |
55 |
cattagtactacatgaaataaaactcatcatcaaataccaaacacaacaatctaccaaaagaaaagctaaaatacctgaaggacacaacccattaccaca |
154 |
Q |
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||||||| ||||||||||||| | |||||| |||| ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31630709 |
cattagttctacatgaaataagaatcatcaacaaacaccaaacacaatagttaaccaaaagaaaagctaaaatacctgaaggacacaacccattaccaca |
31630808 |
T |
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| Q |
155 |
aatacaaataggttcattatcatcagaatcaaacccacattgttggccaccagaactaatacactcaagacaatcattctcaaaagggt |
243 |
Q |
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|||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31630809 |
aatacaaatatgttcgttttcatcagaatcaaacccacattgttggccaccagaactaatacactcaagacaatcattctcaaaagggt |
31630897 |
T |
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