View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17117_low_9 (Length: 572)
Name: NF17117_low_9
Description: NF17117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17117_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 503; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 62 - 572
Target Start/End: Original strand, 36998286 - 36998796
Alignment:
| Q |
62 |
agcgagtataatttatgtataattattaaactctcctaattttttatttattcaagcaaagtgaaattacaactccatgtgagcatgtcacagaatgtcc |
161 |
Q |
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| T |
36998286 |
agcgagtataatttatgtataattattaaactctcctaattttttatttattcaagcaaagtgaaattacaactccatgtgagcatgtcacagaatgtcc |
36998385 |
T |
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| Q |
162 |
cacgtacataaataaattggaacatccacaagctcagaccaaaaaagaaaaggaaatgaaacaaacataaattaaacctcttaagacagacaatgactta |
261 |
Q |
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| T |
36998386 |
cacgtacataaataaattggaacatccacaagctcagaccaaaaaagaaaaggaaatgaaacaaacataaattaaacctcttaagacagacaatgactta |
36998485 |
T |
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| Q |
262 |
agaggaaaacaaacatacgaccacataaactaaaccttattttgtgtgtaatgaagcagttagctatcattgtattcatttataagtaccaccagtggta |
361 |
Q |
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| T |
36998486 |
agaggaaaacaaacatacaaccacataaactaaaccttattttgtgtgtaatgaagcagttagctatcattgtattcatttataagtaccaccagtggtg |
36998585 |
T |
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| Q |
362 |
taccctgtggcatttggatttccaccaacacgggtattatgggccgtggcggtcccatctgtgcctctattagtcccaatagggtgtgagcccaccacac |
461 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36998586 |
taccctgtggcatttggatttccaccaacacgggtattatgggccgtggcggtcccatctgtgcctctattagtcccaatagggtgtgagcccaccacac |
36998685 |
T |
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| Q |
462 |
cgtcgacgacatggcccgtgggctgtccagttccatgaccaggcatggctgacatctgatgtgccccagtgggatgtccataattcccagtggtagagta |
561 |
Q |
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| T |
36998686 |
cgtcgacgacatggcccgtgggctgtccagttccatgaccaggcatggctgacatctgatgtgccccagtgggatgtccataattcccagtggtagagta |
36998785 |
T |
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| Q |
562 |
tgtggcggtcc |
572 |
Q |
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| T |
36998786 |
tgtggcggtcc |
36998796 |
T |
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