View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17119_high_5 (Length: 291)
Name: NF17119_high_5
Description: NF17119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17119_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 66 - 272
Target Start/End: Original strand, 7076404 - 7076611
Alignment:
| Q |
66 |
gctgttacaattagaaacagtcacatattaaggaaaagct-gaaacagacacaagaagaagcaaagacacctcctcacactgtttatgttctgttgtctt |
164 |
Q |
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| T |
7076404 |
gctgttacaattagaaacagtcacatattaaggaaaagcttgaaacagacacaagaagaagcaaagacacctcctcacactgtttatgttctgttgtctt |
7076503 |
T |
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| Q |
165 |
ttgtttctctttaatctggtatcttactcattaccttgctccttcttctcttctcctagctgagtttcaatctccagttatgttgaccaataatagtgct |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
7076504 |
ttgtttctctttaatctggtatcttactcattaccttgctccttcttctcttctcctagctgagtttcaatctctagttatgttgaccaataatattgct |
7076603 |
T |
|
| Q |
265 |
gcaattac |
272 |
Q |
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|||||||| |
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| T |
7076604 |
gcaattac |
7076611 |
T |
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