View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1712-Insertion-3 (Length: 252)
Name: NF1712-Insertion-3
Description: NF1712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1712-Insertion-3 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 28535304 - 28535060
Alignment:
| Q |
8 |
caaccaaaccacaacattgatcttctacaaactcatgaccaataatatgtggctgattattattatatctaccattgaaattctgaaaccctccaccata |
107 |
Q |
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| T |
28535304 |
caaccaaaccacaacattgatcttctacaaactcatgaccaataatatgtggctgattattattatatctaccattgaaattctgaaaccctccaccata |
28535205 |
T |
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| Q |
108 |
aaatcccattttacaatctgataataaagccggaacagcgaaatcttgttgatcaaccaaatttggaatccaagaagctgaagcatcacaatcaagtgac |
207 |
Q |
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| T |
28535204 |
aaatcccattttacaatctgataataaagccggaacagcgaaatcttgttgatcaaccaaatttggaatccaagaagctgaagcatcacaatcaagtgac |
28535105 |
T |
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| Q |
208 |
acaatttgatcaaatgctccataattttcataaacaggcattata |
252 |
Q |
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| T |
28535104 |
acaatttgatcaaatgctccataattttcataaacaggcattata |
28535060 |
T |
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