View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17120_low_5 (Length: 542)
Name: NF17120_low_5
Description: NF17120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17120_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 485; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 14 - 518
Target Start/End: Complemental strand, 7430744 - 7430240
Alignment:
| Q |
14 |
ataatactctgttatatcattcagtccagttcttcctcaaatctcaaccatcacattcatatttcatccaccaccacgcgctactcaattctcacgcgcc |
113 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
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| T |
7430744 |
ataatattctgttatatcattcagtccagttcttcctcaaatctcaaccatcacattcacatttcctccaccaccacgcgctactcaattctcacgcgcc |
7430645 |
T |
|
| Q |
114 |
tccgatcaaaaccaatgcgccaccactgatgcgcatggagataacaccaacaaccttcgcatcccacagttactccgaccttccctccgccgcatccatg |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7430644 |
tccgattaaaaccaatgcgccaccactgatgcgcatggagataacaccaacaaccttcgcatcccacagttactccgaccttccctccgccgcatccatg |
7430545 |
T |
|
| Q |
214 |
ccgactcgtcctatcagagttatccctatgcaacatccaaaccttacgtctccatcttcttcgaattcgttacctccgaatgtcgcgattacgcagttcg |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7430544 |
ccgactcgtcctatcagagttatccctatgcaacatccaaaccttacgtctccatcttcttcgaattcgttacctccgaatgtcgcgattacgcagttcg |
7430445 |
T |
|
| Q |
314 |
cgtcgaagcttcgaggaatgacgtggcttgaatggattgagttcttgattccttgttatcgttggattcggatatataaatggcgtgagtatcttcaggt |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7430444 |
cgtcgaagcttcgaggaatgacgtggcttgaatggattgagttcttgattccttgttatcgttggattcggatatataaatggcgtgagtatcttcaggt |
7430345 |
T |
|
| Q |
414 |
tgatcttatggctggaatcaccgttggtgttatgctcgttcctcaggtaacgtttcttctccgtttcgttgctgagaaaatgatagaaaaatgtttccat |
513 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7430344 |
tgatcttatggctggaatcaccgttggtgttatgctcgttcctcaggtaacgcttcttctccgtttcgttgctgagaaaatgatagaaaaatgtttccat |
7430245 |
T |
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| Q |
514 |
tttcg |
518 |
Q |
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||||| |
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| T |
7430244 |
tttcg |
7430240 |
T |
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