View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17122_high_9 (Length: 235)
Name: NF17122_high_9
Description: NF17122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17122_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 3590474 - 3590324
Alignment:
| Q |
41 |
taatatgtattttttaaaaataatcaaatatgtccctattagggaataaattttcccttagtcaatgtattacttccgacataatactcatttaattttc |
140 |
Q |
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| T |
3590474 |
taatatgtattttttaaaaataatcaaatatgtccctattagagaataaattttcccttagtcaatgtattacttccgacataatactcatttaattttc |
3590375 |
T |
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| Q |
141 |
caatccatatgtaccactagtcaaagacatactcgcaactattataaagaa |
191 |
Q |
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| T |
3590374 |
caatccatatgtaccactagtcaaagacatactcgcaactattataaagaa |
3590324 |
T |
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