View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17122_low_5 (Length: 317)

Name: NF17122_low_5
Description: NF17122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17122_low_5
NF17122_low_5
[»] chr5 (8 HSPs)
chr5 (1-252)||(22750998-22751249)
chr5 (49-232)||(38144532-38144714)
chr5 (57-232)||(28370058-28370232)
chr5 (57-232)||(19512263-19512438)
chr5 (44-167)||(23528573-23528695)
chr5 (57-118)||(18407947-18408008)
chr5 (57-118)||(23111203-23111264)
chr5 (57-109)||(22438751-22438803)
[»] chr7 (17 HSPs)
chr7 (1-252)||(18873217-18873468)
chr7 (57-252)||(15168032-15168227)
chr7 (58-252)||(10895795-10895989)
chr7 (50-252)||(14422841-14423043)
chr7 (49-249)||(12709839-12710038)
chr7 (49-249)||(13122910-13123109)
chr7 (49-252)||(13743566-13743768)
chr7 (57-232)||(16009454-16009628)
chr7 (49-245)||(12590639-12590832)
chr7 (49-167)||(13007374-13007491)
chr7 (57-222)||(16677180-16677347)
chr7 (57-222)||(17651416-17651583)
chr7 (57-109)||(11382874-11382926)
chr7 (57-109)||(11389351-11389403)
chr7 (57-109)||(20311055-20311107)
chr7 (57-109)||(21230963-21231015)
chr7 (57-117)||(13679485-13679545)
[»] chr3 (14 HSPs)
chr3 (57-252)||(14762761-14762956)
chr3 (57-252)||(38310803-38310998)
chr3 (57-252)||(20247792-20247987)
chr3 (57-247)||(24192817-24193008)
chr3 (57-232)||(9534205-9534379)
chr3 (57-232)||(23370509-23370684)
chr3 (57-167)||(24933832-24933941)
chr3 (49-135)||(41455093-41455178)
chr3 (49-193)||(16801463-16801606)
chr3 (57-232)||(55499105-55499281)
chr3 (57-115)||(18929239-18929297)
chr3 (57-118)||(17240516-17240577)
chr3 (57-108)||(13302244-13302295)
chr3 (57-108)||(13323791-13323842)
[»] chr6 (22 HSPs)
chr6 (57-252)||(23057795-23057990)
chr6 (49-252)||(29614142-29614345)
chr6 (49-250)||(18800296-18800497)
chr6 (57-232)||(23839075-23839250)
chr6 (57-252)||(4477714-4477909)
chr6 (57-232)||(10986184-10986359)
chr6 (49-186)||(930091-930227)
chr6 (49-167)||(12168305-12168422)
chr6 (49-167)||(19287214-19287331)
chr6 (49-167)||(19785865-19785982)
chr6 (49-167)||(19878398-19878515)
chr6 (49-167)||(19884174-19884291)
chr6 (57-136)||(34639990-34640069)
chr6 (57-252)||(21565215-21565410)
chr6 (57-136)||(34646664-34646743)
chr6 (57-167)||(25469708-25469816)
chr6 (57-110)||(25397172-25397225)
chr6 (61-109)||(24512851-24512899)
chr6 (57-106)||(9187498-9187547)
chr6 (57-110)||(19471338-19471391)
chr6 (57-110)||(25348486-25348539)
chr6 (57-110)||(25598643-25598696)
[»] scaffold0029 (1 HSPs)
scaffold0029 (49-252)||(111738-111942)
[»] scaffold0026 (2 HSPs)
scaffold0026 (49-252)||(11846-12049)
scaffold0026 (57-232)||(111563-111737)
[»] scaffold1773 (1 HSPs)
scaffold1773 (49-252)||(1036-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (49-252)||(50037-50238)
[»] chr4 (9 HSPs)
chr4 (49-252)||(8045828-8046030)
chr4 (49-252)||(11847964-11848173)
chr4 (57-167)||(53483646-53483756)
chr4 (57-109)||(15408139-15408191)
chr4 (57-110)||(8834895-8834948)
chr4 (57-110)||(13888641-13888694)
chr4 (57-108)||(14486661-14486712)
chr4 (59-110)||(22724691-22724742)
chr4 (57-110)||(15245215-15245268)
[»] scaffold0025 (1 HSPs)
scaffold0025 (57-252)||(14399-14595)
[»] scaffold0924 (1 HSPs)
scaffold0924 (49-252)||(746-949)
[»] chr2 (12 HSPs)
chr2 (57-252)||(19661457-19661651)
chr2 (57-232)||(6483595-6483769)
chr2 (57-232)||(6487062-6487236)
chr2 (49-222)||(26583715-26583886)
chr2 (57-232)||(23878885-23879059)
chr2 (57-252)||(23089058-23089253)
chr2 (57-232)||(23101466-23101641)
chr2 (57-167)||(5706027-5706137)
chr2 (57-118)||(23265133-23265194)
chr2 (57-118)||(23280201-23280262)
chr2 (57-115)||(21908353-21908411)
chr2 (57-110)||(24661576-24661629)
[»] scaffold0247 (1 HSPs)
scaffold0247 (49-231)||(11219-11401)
[»] chr8 (12 HSPs)
chr8 (57-232)||(44477500-44477674)
chr8 (57-232)||(44492658-44492832)
chr8 (49-233)||(23866490-23866674)
chr8 (57-232)||(8727736-8727911)
chr8 (57-167)||(17054533-17054642)
chr8 (1-110)||(18614271-18614380)
chr8 (145-232)||(27940946-27941032)
chr8 (57-118)||(23482056-23482117)
chr8 (57-110)||(39364919-39364972)
chr8 (57-108)||(29643389-29643440)
chr8 (57-109)||(14056567-14056619)
chr8 (57-109)||(25111976-25112028)
[»] scaffold0117 (2 HSPs)
scaffold0117 (49-252)||(1893-2095)
scaffold0117 (49-252)||(8570-8772)
[»] chr1 (8 HSPs)
chr1 (57-232)||(20437027-20437202)
chr1 (49-167)||(41111977-41112094)
chr1 (1-118)||(32651563-32651680)
chr1 (57-109)||(19663520-19663572)
chr1 (57-118)||(18712790-18712851)
chr1 (57-110)||(10811786-10811839)
chr1 (57-110)||(20805320-20805373)
chr1 (57-109)||(11158093-11158145)
[»] scaffold0058 (1 HSPs)
scaffold0058 (49-252)||(149-350)
[»] scaffold0553 (1 HSPs)
scaffold0553 (57-232)||(10199-10374)
[»] scaffold0544 (1 HSPs)
scaffold0544 (57-232)||(1529-1704)
[»] scaffold0090 (1 HSPs)
scaffold0090 (49-251)||(18026-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (1-136)||(904-1039)
scaffold0456 (1-136)||(8049-8184)
scaffold0456 (199-252)||(846-899)
scaffold0456 (199-252)||(7991-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (49-193)||(30772-30917)
[»] scaffold0796 (2 HSPs)
scaffold0796 (49-167)||(1728-1845)
scaffold0796 (49-167)||(5751-5868)
[»] scaffold0476 (1 HSPs)
scaffold0476 (57-250)||(3296-3490)
[»] scaffold0077 (1 HSPs)
scaffold0077 (57-232)||(3625-3800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (7-118)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (57-165)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (57-118)||(16811-16872)
[»] scaffold0124 (1 HSPs)
scaffold0124 (57-109)||(34279-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (57-118)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (57-118)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (57-118)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (57-109)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (57-109)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-109)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (57-107)||(22596-22646)
[»] scaffold0634 (1 HSPs)
scaffold0634 (213-252)||(3519-3558)
[»] scaffold0138 (1 HSPs)
scaffold0138 (57-110)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (57-117)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (57-109)||(15000-15052)
[»] scaffold0096 (1 HSPs)
scaffold0096 (57-110)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (57-105)||(1453-1501)


Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 22751249 - 22750998
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttc 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  101 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 200  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  201 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 22750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 49 - 232
Target Start/End: Original strand, 38144532 - 38144714
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 38144714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 28370058 - 28370232
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  28370058 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 28370157  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  28370158 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 28370232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 19512438 - 19512263
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  19512438 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 19512339  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  19512338 tgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatct 19512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 23528695 - 23528573
Alignment:
Q  44 cttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 143  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  144 gttagggtttaatgatgattctga 167  Q
    |||||||||| |||||||||||||    
T  23528596 gttagggtttgatgatgattctga 23528573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 23111203 - 23111264
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111203 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 18873468 - 18873217
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttc 100  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  101 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 200  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  201 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 18873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 15168227 - 15168032
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 15168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 10895795 - 10895989
Alignment:
Q  58 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 156  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 10895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 50 - 252
Target Start/End: Complemental strand, 14423043 - 14422841
Alignment:
Q  50 aaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttag 148  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  249 cata 252  Q
    ||||    
T  14422844 cata 14422841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 12709839 - 12710038
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 13122910 - 13123109
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 13743768 - 13743566
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  249 cata 252  Q
    ||||    
T  13743569 cata 13743566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 16009628 - 16009454
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 16009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 12590639 - 12590832
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 245  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| ||||||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  155 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 222  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  155 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 222  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaatt 117  Q
    ||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 14762761 - 14762956
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 14762956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 38310803 - 38310998
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 38310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 20247792 - 20247987
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 20247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 247
Target Start/End: Complemental strand, 24193008 - 24192817
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtga 24192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 9534379 - 9534205
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9534379 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 9534280  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  9534279 gatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 9534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 23370509 - 23370684
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 23370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  157 gatgattctga 167  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 135  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 193  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 55499105 - 55499281
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 154  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  155 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 55499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 115  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 5e-90; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 23057990 - 23057795
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 23057795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 29614142 - 29614345
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttgg-aaaataaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| ||||| ||  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  248 tcata 252  Q
    |||||    
T  29614341 tcata 29614345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 49 - 250
Target Start/End: Complemental strand, 18800497 - 18800296
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 147  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  248 tca 250  Q
    |||    
T  18800298 tca 18800296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 23839250 - 23839075
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |    
T  23839250 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttga 23839151  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||| ||||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  23839150 tgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 23839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 4477909 - 4477714
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 10986184 - 10986359
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 10986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatc 186  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 136  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 21565215 - 21565410
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  21565315 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 21565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 136  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  157 gatgattctga 167  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 25397225 - 25397172
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397225 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  61 agggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 106  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 111942 - 111738
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  248 tcata 252  Q
    |||||    
T  111742 tcata 111738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 11846 - 12049
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  249 cata 252  Q
    ||||    
T  12046 cata 12049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 111737 - 111563
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 111563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 1237 - 1036
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  249 cata 252  Q
    ||||    
T  1039 cata 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 50238 - 50037
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  249 cata 252  Q
    ||||    
T  50040 cata 50037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 8045828 - 8046030
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  249 cata 252  Q
    ||||    
T  8046027 cata 8046030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 11848173 - 11847964
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 142  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  143 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  243 tgtgatcata 252  Q
    ||||||||||    
T  11847973 tgtgatcata 11847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 155  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  156 tgatgattctga 167  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||||  || || |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  59 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 14399 - 14595
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||    
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcata 14595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 746 - 949
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  248 tcata 252  Q
    |||||    
T  945 tcata 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 19661457 - 19661651
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 19661651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 6483769 - 6483595
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6483769 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6483670  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6483669 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6483595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 6487236 - 6487062
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6487236 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6487137  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  6487136 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 6487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 222  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 23879059 - 23878885
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    ||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| ||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 23089058 - 23089253
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||| ||||| | |||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || |||||||||||||    
T  23089158 tgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcata 23089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 23101466 - 23101641
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||||||||| ||||||||   ||||||| | | |||| |||||||| ||||||||    
T  23101566 tgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatct 23101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  156 tgatgattctga 167  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 115  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 49 - 231
Target Start/End: Complemental strand, 11401 - 11219
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatc 231  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatc 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 44477674 - 44477500
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44477500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 44492832 - 44492658
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  157 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| ||||||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatct 44492658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 49 - 233
Target Start/End: Complemental strand, 23866674 - 23866490
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctt 233  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatctt 23866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 8727736 - 8727911
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
     ||||||||||| ||| | |||||| ||||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  8727836 cgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatct 8727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 156  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  157 gatgattctga 167  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18614380 - 18614271
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcgataatcataatctataattt 99  Q
    |||| ||||||||| |||||||||||| | || |||||||||| ||||||||  || |||||||||||||||||||||| |||||||| || ||||||||    
T  18614380 gagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataattt 18614282  T
Q  100 ctgaaaattga 110  Q
    |||||||||||    
T  18614281 ctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 27940946 - 27941032
Alignment:
Q  145 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| |||||||    
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatct 27941032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 23482056 - 23482117
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482056 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 1893 - 2095
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 147  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  248 tcata 252  Q
    |||||    
T  2091 tcata 2095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 49 - 252
Target Start/End: Original strand, 8570 - 8772
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 147  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 247  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  248 tcata 252  Q
    |||||    
T  8768 tcata 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 20437027 - 20437202
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  20437027 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 20437126  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||| ||||| ||||||||   ||||||| ||||||||||||||||||||||||||    
T  20437127 tgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatct 20437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32651680 - 32651563
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcgataatcataatctataattt 99  Q
    |||| ||||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||| ||||||||| | ||||||||    
T  32651680 gagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataattt 32651582  T
Q  100 ctgaaaattgacctaattg 118  Q
    ||||||||||| |||||||    
T  32651581 ctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 49 - 252
Target Start/End: Complemental strand, 350 - 149
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  149 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  249 cata 252  Q
    ||||    
T  152 cata 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 10199 - 10374
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 10374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 1529 - 1704
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 155  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatct 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 18229 - 18026
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 246  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  247 atcat 251  Q
    |||||    
T  18030 atcat 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 104; Significance: 8e-52; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttc 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  101 tgaaaattgacctaattgcttagttttggaaaataa 136  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  1 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttc 100  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  101 tgaaaattgacctaattgcttagttttggaaaataa 136  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 899 - 846
Alignment:
Q  199 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 8044 - 7991
Alignment:
Q  199 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcata 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 147  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  148 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 193  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  49 aaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 148  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  149 ggtttaatgatgattctga 167  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 250
Target Start/End: Original strand, 3296 - 3490
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  156 tgatgattctgaagggaattgggtaatg-atcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatca 250  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || |||||||||||    
T  3396 tgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatca 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 3625 - 3800
Alignment:
Q  57 ggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 155  Q
    ||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  156 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatct 232  Q
    |||||||||||| ||| | |||||||||||| ||||||||   ||||||| | |||||| |||||||| ||||||||    
T  3725 tgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatct 3800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  7 aacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcgataatcataatctataatttctgaaa 105  Q
    |||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  106 attgacctaattg 118  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 155  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  156 tgatgattct 165  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 11 - 72
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    |||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

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Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 107  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 3558 - 3519
Alignment:
Q  213 tcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcata 3519  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaatt 117  Q
    ||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0139 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0815 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  57 ggtaagggtgagactatctctcgataatcataatctataatttctgaaa 105  Q
    |||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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