View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17123_high_3 (Length: 605)

Name: NF17123_high_3
Description: NF17123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17123_high_3
NF17123_high_3
[»] chr4 (6 HSPs)
chr4 (162-472)||(32602699-32603006)
chr4 (236-472)||(23562073-23562306)
chr4 (1-129)||(32603039-32603167)
chr4 (31-109)||(23562433-23562511)
chr4 (561-605)||(32602539-32602583)
chr4 (446-475)||(32602668-32602697)
[»] chr8 (8 HSPs)
chr8 (164-468)||(9680790-9681091)
chr8 (183-471)||(5188583-5188868)
chr8 (1-121)||(9680627-9680747)
chr8 (30-113)||(5188430-5188513)
chr8 (237-290)||(13658564-13658617)
chr8 (237-290)||(13717206-13717259)
chr8 (358-404)||(13658453-13658499)
chr8 (358-404)||(13717095-13717141)
[»] chr3 (1 HSPs)
chr3 (167-472)||(31072368-31072670)
[»] chr6 (1 HSPs)
chr6 (1-129)||(19792442-19792570)
[»] scaffold0867 (2 HSPs)
scaffold0867 (164-464)||(1094-1391)
scaffold0867 (30-110)||(960-1040)
[»] chr1 (2 HSPs)
chr1 (168-464)||(19992533-19992825)
chr1 (31-109)||(19992396-19992474)
[»] chr7 (2 HSPs)
chr7 (174-471)||(9213088-9213381)
chr7 (70-113)||(9213442-9213485)


Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 162 - 472
Target Start/End: Complemental strand, 32603006 - 32602699
Alignment:
Q  162 cctgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattg 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  32603006 cctgtggaaatgtctactcccaaatttgatgctttgaaagatgacttcaacaaaagattagaattaatgtcagggtttgcacgtgattatgcacgtattg 32602907  T
Q  262 agagtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaat 361  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  32602906 agagtgaaaaacttgagatagagagaaaaagggttgatg---ccgagttgcaaagagttgaagatgataggaaaaggtcgaagatcaatgatttacaaat 32602810  T
Q  362 actcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattat 461  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32602809 actcacaaaggatacatcaaatatgaatccaagacaactaaatgattatgattttttgtatgacgtgattagagaaaaatatggacttaattgatattat 32602710  T
Q  462 tatatatgttt 472  Q
    |||||||||||    
T  32602709 tatatatgttt 32602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 236 - 472
Target Start/End: Complemental strand, 23562306 - 23562073
Alignment:
Q  236 gtttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaa 335  Q
    ||||||| ||||||||||||||||||||||||||||  | ||||||||||| |||||||||| ||   | |||||  |||||   ||| |||||||||||    
T  23562306 gtttgcacgtgattatgcacgtattgagagtgaaaaggtcgagatagagaggaaaagggttgatg---cggagctacaaagaaccgaaaatgatagggaa 23562210  T
Q  336 aggtcgaagatcaataatttacaaatactcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagag 435  Q
    |||||||||||| || |||||||||| ||   ||||||||| |||||||||||| ||||||||||||| |||||||| | |||||||| | |||||||||    
T  23562209 aggtcgaagatcgatgatttacaaattcttttaaaggatacgtcaaatatgaatgcaagacaactaaaagattatgaatatttgtgtggcatgattagag 23562110  T
Q  436 aaaaatatggacttaattgatattattatatatgttt 472  Q
    | ||||||||||||||||||||||||||| |||||||    
T  23562109 ataaatatggacttaattgatattattatgtatgttt 23562073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32603167 - 32603039
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  32603167 ggcttgcaggttgtgtattggaaccgtccgcaaaaggaacaaacaatttagcttctggagcatattcggcatcttccaacccaccaacaccaacaagcga 32603068  T
Q  101 atacaatccaccacaaagtccaatcggtc 129  Q
    |||||||||||||||| ||||||||||||    
T  32603067 atacaatccaccacaacgtccaatcggtc 32603039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 23562511 - 23562433
Alignment:
Q  31 caaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcc 109  Q
    ||||| ||||||| |||||| ||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||    
T  23562511 caaaaagaacaaagaattcaacttctggagcatattcgccgtcttctaacccaccaacaccaacaagcgaatacaatcc 23562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 561 - 605
Target Start/End: Complemental strand, 32602583 - 32602539
Alignment:
Q  561 cgacatgcatttccttccaaaaatatgatatattggaaactagcc 605  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  32602583 cgacatgcatttccttccaaaaatataatatattggaaactagcc 32602539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 475
Target Start/End: Complemental strand, 32602697 - 32602668
Alignment:
Q  446 acttaattgatattattatatatgtttaac 475  Q
    ||||||||||||||||||||||||||||||    
T  32602697 acttaattgatattattatatatgtttaac 32602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-110; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 164 - 468
Target Start/End: Original strand, 9680790 - 9681091
Alignment:
Q  164 tgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgag 263  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||  ||||||||| ||||||||| | |||||||||||||| |||||    
T  9680790 tgtggaaatttctactcccaaatttgatactttgaaagatgacttcaacaaaaaatatgaattaatgtcagggtttgtacgtgattatgcacgttttgag 9680889  T
Q  264 agtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatac 363  Q
    ||||||||| |||||||||||||||||||||||| ||   ||||| || ||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  9680890 agtgaaaaaattgagatagagagaaaaagggttgatg---ccgagttgcaaagagttgagaatgatagggaaaggtcgaagatcaatgatttacaaatac 9680986  T
Q  364 tcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattatta 463  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9680987 tcacaaaggatacatcaaatatgaatccaagacaactacaagattatgaatttttgtgtggcgtgattagagataaatatggacttaattgatattatta 9681086  T
Q  464 tatat 468  Q
    |||||    
T  9681087 tatat 9681091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 183 - 471
Target Start/End: Original strand, 5188583 - 5188868
Alignment:
Q  183 aaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtgaaaaacttgagatag 282  Q
    ||||| |||||||||||| |||| || ||||||| ||| ||| ||||| |||||||| ||  ||||| |||| ||||||||||||||||| |||||||||    
T  5188583 aaatttgatgctttgaaaaatgatttgaacaaaaaatttgaaataatgtcagggtttacacatgattgtgcatgtattgagagtgaaaaagttgagatag 5188682  T
Q  283 agagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcacaaaggatacatcaaa 382  Q
    |||||||||||||||   ||||  ||||| |||  || ||| ||||||||||||||  |||||||||| ||||| ||||| || | ||||||| ||||||    
T  5188683 agagaaaaagggttg---atacaaagctgcaaaaggtcgaaaatgatagggaaaggatgaagatcaatgatttagaaatattctcgaaggatatatcaaa 5188779  T
Q  383 tatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatatatgtt 471  Q
    |||||||||||| |||||| | |||||||| |||||||||| |||||||||||| ||||||| ||| || |||||||||||| ||||||    
T  5188780 tatgaatccaaggcaactacaagattatgaatttttgtgtggcgtgattagagataaatatgtactaaagtgatattattatgtatgtt 5188868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9680627 - 9680747
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  9680627 ggcttgcgggttgtgcattggaaccgtccacaaaaagaacaaagaattcagcttctggagcatattcggcatcttctaacccaccaacaccaacaagcga 9680726  T
Q  101 atacaatccaccacaaagtcc 121  Q
    |||||||||||||||| ||||    
T  9680727 atacaatccaccacaacgtcc 9680747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 5188430 - 5188513
Alignment:
Q  30 gcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatccacca 113  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5188430 gcaaaaagaacaaataattcagcttctggagaatattcatcatcttctaacccaccaacaccaacaagcgaatacaatccacca 5188513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 13658617 - 13658564
Alignment:
Q  237 tttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaa 290  Q
    |||||| |||||||||||||||||||| ||||||||   |||||||||||||||    
T  13658617 tttgcacgtgattatgcacgtattgagggtgaaaaagccgagatagagagaaaa 13658564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 13717259 - 13717206
Alignment:
Q  237 tttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaa 290  Q
    |||||| |||||||||||||||||||| ||||||||   |||||||||||||||    
T  13717259 tttgcacgtgattatgcacgtattgagggtgaaaaagccgagatagagagaaaa 13717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 13658499 - 13658453
Alignment:
Q  358 aaatactcacaaaggatacatcaaatatgaatccaagacaactaaag 404  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  13658499 aaatactcaagaaggatacatcaattatgaattcaagacaactaaag 13658453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 13717141 - 13717095
Alignment:
Q  358 aaatactcacaaaggatacatcaaatatgaatccaagacaactaaag 404  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  13717141 aaatactcaagaaggatacatcaattatgaattcaagacaactaaag 13717095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 167 - 472
Target Start/End: Original strand, 31072368 - 31072670
Alignment:
Q  167 ggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagt 266  Q
    ||||||||||| | ||||||| ||| |||||||| |||||||||||||||  || ||| ||||| | ||||||||| |||||||||||||||||||||||    
T  31072368 ggaaatgtcta-taccaaatttgatactttgaaaaatgacttcaacaaaaagtttgaactaatgtccgggtttgcacgtgattatgcacgtattgagagt 31072466  T
Q  267 gaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactca 366  Q
    |||||| | || ||||||||||||| ||  || ||| | |||||| |||||   ||  |||||| ||||||||| ||||||||| ||||||||||  |||    
T  31072467 gaaaaagtcgatatagagagaaaaaagg--gtcgatgcggagctgcaaagaaccgagaatgatatggaaaggtcaaagatcaattatttacaaattatca 31072564  T
Q  367 caaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatat 466  Q
    | ||||||||||| ||||||||||||||||||||| | |||||||| | |||||||| | |||||||||| ||||||| ||||||||||||||||||| |    
T  31072565 cgaaggatacatcgaatatgaatccaagacaactacaagattatgaatatttgtgtggcatgattagagataaatatgaacttaattgatattattatgt 31072664  T
Q  467 atgttt 472  Q
    ||||||    
T  31072665 atgttt 31072670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19792570 - 19792442
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  19792570 ggcttgcaggttgtgtattggaaccgtccgcaaaaagaacaaagaattcagcttctggagcatatttggcatcttctaacccaccaacaccaacaagcga 19792471  T
Q  101 atacaatccaccacaaagtccaatcggtc 129  Q
    ||||||||||||||||  |||||||||||    
T  19792470 atacaatccaccacaacttccaatcggtc 19792442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 164 - 464
Target Start/End: Original strand, 1094 - 1391
Alignment:
Q  164 tgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgag 263  Q
    |||||| | ||||||||| | ||| |||||||||||| ||||| | |||||||||   ||| ||||| |||  |||||| |||||||||  || |||||     
T  1094 tgtggagaagtctactcctatatttgatgctttgaaaaatgacatgaacaaaagaactgaaataatgtcagtttttgcacgtgattatgtgcgcattgaa 1193  T
Q  264 agtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatac 363  Q
    ||||||||| ||||||||||||| |||||||||| ||   | ||| || | |  |  ||  ||||||||||||||  |||||||||| ||||| ||||||    
T  1194 agtgaaaaagttgagatagagaggaaaagggttgatg---cagagttgcagaaggccgagaatgatagggaaaggatgaagatcaatgatttagaaatac 1290  T
Q  364 tcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattatta 463  Q
    || | ||||||||||||||||||||||||||||||||| | |||||||| |||||||||  |||||||||||| |||||||||||||| |||| ||||||    
T  1291 tctcgaaggatacatcaaatatgaatccaagacaactacaagattatgaatttttgtgtagcgtgattagagataaatatggacttaagtgattttatta 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 960 - 1040
Alignment:
Q  30 gcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcca 110  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||| || |||||||||||| ||||||||    
T  960 gcaaaaagaacaaagaattcagcttctggagaatattcatcatcttctaacccaccgacgccaacaagcgaacacaatcca 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 168 - 464
Target Start/End: Original strand, 19992533 - 19992825
Alignment:
Q  168 gaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtg 267  Q
    |||| ||||||| ||||||| ||| |||||||| |||||||| ||||||  || ||| || |  | | |||||||  ||||||||||| |||||||||||    
T  19992533 gaaacgtctactaccaaatttgatactttgaaatatgacttcgacaaaaagtttgaactagtatccgtgtttgcacatgattatgcacatattgagagtg 19992632  T
Q  268 aaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcac 367  Q
    ||||  | ||||||||||| |||||||||| ||   | ||| || |||||   ||| ||||||||||||||||||||||| || |||||||| |  |       
T  19992633 aaaaggtcgagatagagaggaaaagggttgatg---cagagttgcaaagaaccgaaaatgatagggaaaggtcgaagatcgatgatttacaattttttt- 19992728  T
Q  368 aaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattat 464  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||| | |||||||||| |||||||||| ||||||||||||||||    
T  19992729 aaaggatacatcaaatatgaatgcaagacaactaaaagattatgaatatttgtgtggcatgattagagataaatatggacataattgatattattat 19992825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 19992396 - 19992474
Alignment:
Q  31 caaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcc 109  Q
    ||||| ||||||| |||||| ||||||||| |||||   | ||| ||||||||||||||||||||||||||||||||||    
T  19992396 caaaaagaacaaataattcaacttctggagcatatttgccgtctactaacccaccaacaccaacaagcgaatacaatcc 19992474  T

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Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 471
Target Start/End: Complemental strand, 9213381 - 9213088
Alignment:
Q  174 tctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtgaaaaac 273  Q
    |||| ||| ||||| |||||||||||| ||||||| ||||||| ||| ||||||||| || |||||||  |||||| |||||||| |||||||||||||     
T  9213381 tctattcctaaatttgatgctttgaaaaatgacttgaacaaaaaatttgaattaatgtcaaggtttgcgcgtgattttgcacgtactgagagtgaaaaag 9213282  T
Q  274 ttgagatagagagaaaaagggttgttgataccgagctgta-aagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcacaaagg 372  Q
    |||||| |||||  |||| ||||| || ||  |||||  | ||||  |||  |||||||||||| |  ||||||| || |||||  |||||||  |||||    
T  9213281 ttgagagagagatgaaaatggttgatg-ta--gagctacacaaga-ctgagaatgatagggaaatgatgaagatc-atgatttaacaatactctaaaagg 9213187  T
Q  373 atacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatatatgtt 471  Q
    ||  |||||||| |||| ||||  || || | |||||||| |||||||||| | |||||||| | ||||||| ||||||||||||||||||| ||||||    
T  9213186 atgtatcaaataggaatacaaggtaattacaagattatgaatttttgtgtggcatgattagacataaatatgaacttaattgatattattatttatgtt 9213088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 9213485 - 9213442
Alignment:
Q  70 catcttctaacccaccaacaccaacaagcgaatacaatccacca 113  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  9213485 catcttctaacccacagacaccaacaagcgaatacaatccacca 9213442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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