View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17123_high_37 (Length: 245)
Name: NF17123_high_37
Description: NF17123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17123_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 55028582 - 55028822
Alignment:
| Q |
1 |
tcccggtagtggtggtggtcatcattggacgagtcttgctgtgcttagtatttgtggctgtggcttgtcggtgagctttattttctcgttattcaatgct |
100 |
Q |
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| T |
55028582 |
tcccggtagtggtggtggtcatcattggacgagtcttgctgtgcttagtatttgtggctgtggcttgtcggtgagctttattttctcgttattcaatgct |
55028681 |
T |
|
| Q |
101 |
agttcaagttcaagttttgatgtgcattttattgttgctttggttggtgtagtttcttatgatatgattttatgcaatctgtgtgattttaattttatta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
55028682 |
agttcaagttcaagttttgatgtgcattttattgttgctttggttggtgcagtttcttatgatatgattttatgcaatctgtgtgtttttaattttatta |
55028781 |
T |
|
| Q |
201 |
gcatgtagtttacgaacgaccacaatagattttacctttgc |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
55028782 |
gcatgtagtttacgaacgaccacaatagattttacctttgc |
55028822 |
T |
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