View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17123_low_3 (Length: 605)

Name: NF17123_low_3
Description: NF17123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17123_low_3
NF17123_low_3
[»] chr4 (6 HSPs)
chr4 (162-472)||(32602699-32603006)
chr4 (236-472)||(23562073-23562306)
chr4 (1-129)||(32603039-32603167)
chr4 (31-109)||(23562433-23562511)
chr4 (561-605)||(32602539-32602583)
chr4 (446-475)||(32602668-32602697)
[»] chr8 (8 HSPs)
chr8 (164-468)||(9680790-9681091)
chr8 (183-471)||(5188583-5188868)
chr8 (1-121)||(9680627-9680747)
chr8 (30-113)||(5188430-5188513)
chr8 (237-290)||(13658564-13658617)
chr8 (237-290)||(13717206-13717259)
chr8 (358-404)||(13658453-13658499)
chr8 (358-404)||(13717095-13717141)
[»] chr3 (1 HSPs)
chr3 (167-472)||(31072368-31072670)
[»] chr6 (1 HSPs)
chr6 (1-129)||(19792442-19792570)
[»] scaffold0867 (2 HSPs)
scaffold0867 (164-464)||(1094-1391)
scaffold0867 (30-110)||(960-1040)
[»] chr1 (2 HSPs)
chr1 (168-464)||(19992533-19992825)
chr1 (31-109)||(19992396-19992474)
[»] chr7 (2 HSPs)
chr7 (174-471)||(9213088-9213381)
chr7 (70-113)||(9213442-9213485)


Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 162 - 472
Target Start/End: Complemental strand, 32603006 - 32602699
Alignment:
Q  162 cctgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattg 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  32603006 cctgtggaaatgtctactcccaaatttgatgctttgaaagatgacttcaacaaaagattagaattaatgtcagggtttgcacgtgattatgcacgtattg 32602907  T
Q  262 agagtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaat 361  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  32602906 agagtgaaaaacttgagatagagagaaaaagggttgatg---ccgagttgcaaagagttgaagatgataggaaaaggtcgaagatcaatgatttacaaat 32602810  T
Q  362 actcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattat 461  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32602809 actcacaaaggatacatcaaatatgaatccaagacaactaaatgattatgattttttgtatgacgtgattagagaaaaatatggacttaattgatattat 32602710  T
Q  462 tatatatgttt 472  Q
    |||||||||||    
T  32602709 tatatatgttt 32602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 236 - 472
Target Start/End: Complemental strand, 23562306 - 23562073
Alignment:
Q  236 gtttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaa 335  Q
    ||||||| ||||||||||||||||||||||||||||  | ||||||||||| |||||||||| ||   | |||||  |||||   ||| |||||||||||    
T  23562306 gtttgcacgtgattatgcacgtattgagagtgaaaaggtcgagatagagaggaaaagggttgatg---cggagctacaaagaaccgaaaatgatagggaa 23562210  T
Q  336 aggtcgaagatcaataatttacaaatactcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagag 435  Q
    |||||||||||| || |||||||||| ||   ||||||||| |||||||||||| ||||||||||||| |||||||| | |||||||| | |||||||||    
T  23562209 aggtcgaagatcgatgatttacaaattcttttaaaggatacgtcaaatatgaatgcaagacaactaaaagattatgaatatttgtgtggcatgattagag 23562110  T
Q  436 aaaaatatggacttaattgatattattatatatgttt 472  Q
    | ||||||||||||||||||||||||||| |||||||    
T  23562109 ataaatatggacttaattgatattattatgtatgttt 23562073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32603167 - 32603039
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  32603167 ggcttgcaggttgtgtattggaaccgtccgcaaaaggaacaaacaatttagcttctggagcatattcggcatcttccaacccaccaacaccaacaagcga 32603068  T
Q  101 atacaatccaccacaaagtccaatcggtc 129  Q
    |||||||||||||||| ||||||||||||    
T  32603067 atacaatccaccacaacgtccaatcggtc 32603039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 23562511 - 23562433
Alignment:
Q  31 caaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcc 109  Q
    ||||| ||||||| |||||| ||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||    
T  23562511 caaaaagaacaaagaattcaacttctggagcatattcgccgtcttctaacccaccaacaccaacaagcgaatacaatcc 23562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 561 - 605
Target Start/End: Complemental strand, 32602583 - 32602539
Alignment:
Q  561 cgacatgcatttccttccaaaaatatgatatattggaaactagcc 605  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  32602583 cgacatgcatttccttccaaaaatataatatattggaaactagcc 32602539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 475
Target Start/End: Complemental strand, 32602697 - 32602668
Alignment:
Q  446 acttaattgatattattatatatgtttaac 475  Q
    ||||||||||||||||||||||||||||||    
T  32602697 acttaattgatattattatatatgtttaac 32602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-110; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 164 - 468
Target Start/End: Original strand, 9680790 - 9681091
Alignment:
Q  164 tgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgag 263  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||  ||||||||| ||||||||| | |||||||||||||| |||||    
T  9680790 tgtggaaatttctactcccaaatttgatactttgaaagatgacttcaacaaaaaatatgaattaatgtcagggtttgtacgtgattatgcacgttttgag 9680889  T
Q  264 agtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatac 363  Q
    ||||||||| |||||||||||||||||||||||| ||   ||||| || ||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  9680890 agtgaaaaaattgagatagagagaaaaagggttgatg---ccgagttgcaaagagttgagaatgatagggaaaggtcgaagatcaatgatttacaaatac 9680986  T
Q  364 tcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattatta 463  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9680987 tcacaaaggatacatcaaatatgaatccaagacaactacaagattatgaatttttgtgtggcgtgattagagataaatatggacttaattgatattatta 9681086  T
Q  464 tatat 468  Q
    |||||    
T  9681087 tatat 9681091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 183 - 471
Target Start/End: Original strand, 5188583 - 5188868
Alignment:
Q  183 aaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtgaaaaacttgagatag 282  Q
    ||||| |||||||||||| |||| || ||||||| ||| ||| ||||| |||||||| ||  ||||| |||| ||||||||||||||||| |||||||||    
T  5188583 aaatttgatgctttgaaaaatgatttgaacaaaaaatttgaaataatgtcagggtttacacatgattgtgcatgtattgagagtgaaaaagttgagatag 5188682  T
Q  283 agagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcacaaaggatacatcaaa 382  Q
    |||||||||||||||   ||||  ||||| |||  || ||| ||||||||||||||  |||||||||| ||||| ||||| || | ||||||| ||||||    
T  5188683 agagaaaaagggttg---atacaaagctgcaaaaggtcgaaaatgatagggaaaggatgaagatcaatgatttagaaatattctcgaaggatatatcaaa 5188779  T
Q  383 tatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatatatgtt 471  Q
    |||||||||||| |||||| | |||||||| |||||||||| |||||||||||| ||||||| ||| || |||||||||||| ||||||    
T  5188780 tatgaatccaaggcaactacaagattatgaatttttgtgtggcgtgattagagataaatatgtactaaagtgatattattatgtatgtt 5188868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9680627 - 9680747
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  9680627 ggcttgcgggttgtgcattggaaccgtccacaaaaagaacaaagaattcagcttctggagcatattcggcatcttctaacccaccaacaccaacaagcga 9680726  T
Q  101 atacaatccaccacaaagtcc 121  Q
    |||||||||||||||| ||||    
T  9680727 atacaatccaccacaacgtcc 9680747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 5188430 - 5188513
Alignment:
Q  30 gcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatccacca 113  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5188430 gcaaaaagaacaaataattcagcttctggagaatattcatcatcttctaacccaccaacaccaacaagcgaatacaatccacca 5188513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 13658617 - 13658564
Alignment:
Q  237 tttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaa 290  Q
    |||||| |||||||||||||||||||| ||||||||   |||||||||||||||    
T  13658617 tttgcacgtgattatgcacgtattgagggtgaaaaagccgagatagagagaaaa 13658564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 13717259 - 13717206
Alignment:
Q  237 tttgcatgtgattatgcacgtattgagagtgaaaaacttgagatagagagaaaa 290  Q
    |||||| |||||||||||||||||||| ||||||||   |||||||||||||||    
T  13717259 tttgcacgtgattatgcacgtattgagggtgaaaaagccgagatagagagaaaa 13717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 13658499 - 13658453
Alignment:
Q  358 aaatactcacaaaggatacatcaaatatgaatccaagacaactaaag 404  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  13658499 aaatactcaagaaggatacatcaattatgaattcaagacaactaaag 13658453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 13717141 - 13717095
Alignment:
Q  358 aaatactcacaaaggatacatcaaatatgaatccaagacaactaaag 404  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  13717141 aaatactcaagaaggatacatcaattatgaattcaagacaactaaag 13717095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 3e-65; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 167 - 472
Target Start/End: Original strand, 31072368 - 31072670
Alignment:
Q  167 ggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagt 266  Q
    ||||||||||| | ||||||| ||| |||||||| |||||||||||||||  || ||| ||||| | ||||||||| |||||||||||||||||||||||    
T  31072368 ggaaatgtcta-taccaaatttgatactttgaaaaatgacttcaacaaaaagtttgaactaatgtccgggtttgcacgtgattatgcacgtattgagagt 31072466  T
Q  267 gaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactca 366  Q
    |||||| | || ||||||||||||| ||  || ||| | |||||| |||||   ||  |||||| ||||||||| ||||||||| ||||||||||  |||    
T  31072467 gaaaaagtcgatatagagagaaaaaagg--gtcgatgcggagctgcaaagaaccgagaatgatatggaaaggtcaaagatcaattatttacaaattatca 31072564  T
Q  367 caaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatat 466  Q
    | ||||||||||| ||||||||||||||||||||| | |||||||| | |||||||| | |||||||||| ||||||| ||||||||||||||||||| |    
T  31072565 cgaaggatacatcgaatatgaatccaagacaactacaagattatgaatatttgtgtggcatgattagagataaatatgaacttaattgatattattatgt 31072664  T
Q  467 atgttt 472  Q
    ||||||    
T  31072665 atgttt 31072670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19792570 - 19792442
Alignment:
Q  1 ggcttgcaggttgtgtattggaaccgtccgcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  19792570 ggcttgcaggttgtgtattggaaccgtccgcaaaaagaacaaagaattcagcttctggagcatatttggcatcttctaacccaccaacaccaacaagcga 19792471  T
Q  101 atacaatccaccacaaagtccaatcggtc 129  Q
    ||||||||||||||||  |||||||||||    
T  19792470 atacaatccaccacaacttccaatcggtc 19792442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 164 - 464
Target Start/End: Original strand, 1094 - 1391
Alignment:
Q  164 tgtggaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgag 263  Q
    |||||| | ||||||||| | ||| |||||||||||| ||||| | |||||||||   ||| ||||| |||  |||||| |||||||||  || |||||     
T  1094 tgtggagaagtctactcctatatttgatgctttgaaaaatgacatgaacaaaagaactgaaataatgtcagtttttgcacgtgattatgtgcgcattgaa 1193  T
Q  264 agtgaaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatac 363  Q
    ||||||||| ||||||||||||| |||||||||| ||   | ||| || | |  |  ||  ||||||||||||||  |||||||||| ||||| ||||||    
T  1194 agtgaaaaagttgagatagagaggaaaagggttgatg---cagagttgcagaaggccgagaatgatagggaaaggatgaagatcaatgatttagaaatac 1290  T
Q  364 tcacaaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattatta 463  Q
    || | ||||||||||||||||||||||||||||||||| | |||||||| |||||||||  |||||||||||| |||||||||||||| |||| ||||||    
T  1291 tctcgaaggatacatcaaatatgaatccaagacaactacaagattatgaatttttgtgtagcgtgattagagataaatatggacttaagtgattttatta 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 960 - 1040
Alignment:
Q  30 gcaaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcca 110  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||| || |||||||||||| ||||||||    
T  960 gcaaaaagaacaaagaattcagcttctggagaatattcatcatcttctaacccaccgacgccaacaagcgaacacaatcca 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 168 - 464
Target Start/End: Original strand, 19992533 - 19992825
Alignment:
Q  168 gaaatgtctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtg 267  Q
    |||| ||||||| ||||||| ||| |||||||| |||||||| ||||||  || ||| || |  | | |||||||  ||||||||||| |||||||||||    
T  19992533 gaaacgtctactaccaaatttgatactttgaaatatgacttcgacaaaaagtttgaactagtatccgtgtttgcacatgattatgcacatattgagagtg 19992632  T
Q  268 aaaaacttgagatagagagaaaaagggttgttgataccgagctgtaaagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcac 367  Q
    ||||  | ||||||||||| |||||||||| ||   | ||| || |||||   ||| ||||||||||||||||||||||| || |||||||| |  |       
T  19992633 aaaaggtcgagatagagaggaaaagggttgatg---cagagttgcaaagaaccgaaaatgatagggaaaggtcgaagatcgatgatttacaattttttt- 19992728  T
Q  368 aaaggatacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattat 464  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| | |||||||| | |||||||||| |||||||||| ||||||||||||||||    
T  19992729 aaaggatacatcaaatatgaatgcaagacaactaaaagattatgaatatttgtgtggcatgattagagataaatatggacataattgatattattat 19992825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 19992396 - 19992474
Alignment:
Q  31 caaaacgaacaaacaattcagcttctggagtatattcagcatcttctaacccaccaacaccaacaagcgaatacaatcc 109  Q
    ||||| ||||||| |||||| ||||||||| |||||   | ||| ||||||||||||||||||||||||||||||||||    
T  19992396 caaaaagaacaaataattcaacttctggagcatatttgccgtctactaacccaccaacaccaacaagcgaatacaatcc 19992474  T

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Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 471
Target Start/End: Complemental strand, 9213381 - 9213088
Alignment:
Q  174 tctactcccaaattggatgctttgaaagatgacttcaacaaaagattagaattaatggcagggtttgcatgtgattatgcacgtattgagagtgaaaaac 273  Q
    |||| ||| ||||| |||||||||||| ||||||| ||||||| ||| ||||||||| || |||||||  |||||| |||||||| |||||||||||||     
T  9213381 tctattcctaaatttgatgctttgaaaaatgacttgaacaaaaaatttgaattaatgtcaaggtttgcgcgtgattttgcacgtactgagagtgaaaaag 9213282  T
Q  274 ttgagatagagagaaaaagggttgttgataccgagctgta-aagagttgaagatgatagggaaaggtcgaagatcaataatttacaaatactcacaaagg 372  Q
    |||||| |||||  |||| ||||| || ||  |||||  | ||||  |||  |||||||||||| |  ||||||| || |||||  |||||||  |||||    
T  9213281 ttgagagagagatgaaaatggttgatg-ta--gagctacacaaga-ctgagaatgatagggaaatgatgaagatc-atgatttaacaatactctaaaagg 9213187  T
Q  373 atacatcaaatatgaatccaagacaactaaaggattatgattttttgtgtgacgtgattagagaaaaatatggacttaattgatattattatatatgtt 471  Q
    ||  |||||||| |||| ||||  || || | |||||||| |||||||||| | |||||||| | ||||||| ||||||||||||||||||| ||||||    
T  9213186 atgtatcaaataggaatacaaggtaattacaagattatgaatttttgtgtggcatgattagacataaatatgaacttaattgatattattatttatgtt 9213088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 9213485 - 9213442
Alignment:
Q  70 catcttctaacccaccaacaccaacaagcgaatacaatccacca 113  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  9213485 catcttctaacccacagacaccaacaagcgaatacaatccacca 9213442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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