View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17126_high_21 (Length: 300)
Name: NF17126_high_21
Description: NF17126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17126_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 6385239 - 6384929
Alignment:
| Q |
1 |
tctcccactaaatgcaccaaaaaattataacaaaaaacaactaaacacattggcatgtgatgggaccggaaagtccactaactcacctacttggaaggta |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6385239 |
tctcccacaaaatgcaccaaaaaattataacaaaaaacaactaaacacattggcatgtgatgggaccggaaagtccactaactcacctacttggaaggta |
6385140 |
T |
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| Q |
101 |
aagatatactccataagagggcatatgatgtagaactgtgtcatatg----------------ttagttatgtatttaattaagcggggtagttatgtag |
184 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
6385139 |
aagatatactccataagagggcatatgatgtagaactgtgtcatatggtagtctgtgtcaatgttagttatgtatttaattaagcggggtagttatgtag |
6385040 |
T |
|
| Q |
185 |
ctcatgtgtatttaatttggcagtcgactcatgtaggacagttatgtatttaattatgtgggaaagttatgtagctcgtgtgtatttaattatgtaggag |
284 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6385039 |
ctcatgtgtatttaatttggcagtcaactcatgtaggacagttatgtatttaattatgtgggaaagttatgtagctcgtgtgtatttaattatgtaggag |
6384940 |
T |
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| Q |
285 |
aataatctacc |
295 |
Q |
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||| ||||||| |
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| T |
6384939 |
aattatctacc |
6384929 |
T |
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