View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17127_high_4 (Length: 351)
Name: NF17127_high_4
Description: NF17127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17127_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 5 - 322
Target Start/End: Complemental strand, 10194428 - 10194107
Alignment:
| Q |
5 |
attttgaataagtaacgcatttaaagataaatatgatgaaagacaagcgaagtgcaaaagatccgatcactacttatacggtttagggttttct------ |
98 |
Q |
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| T |
10194428 |
attttgaataagtaacgcatttaaagataaatatgatgaaagacaagcgaagtgcaaaagatccgatcactacttatacggtttagggttttctggtttt |
10194329 |
T |
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| Q |
99 |
---tgtcaattataatttgcgatttatgatcaaacactgttaggcggcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatgcct |
195 |
Q |
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| T |
10194328 |
tcttgtcaattataatttgcgatttatgatcaaacactgttaggctgcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatgcct |
10194229 |
T |
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| Q |
196 |
ggaatggtgttagggacagaaaattttgataagttccatgttgcagtgaatgcaattgatgcgatgcagtttatgacaaattgcaataccagattatgta |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
10194228 |
ggaatggtgttagggacagaaaattttgataagttccatgttgcagtgaatgcaattgattc-----agtttatgacaaattgcaataccagattatgta |
10194134 |
T |
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| Q |
296 |
ctactggtataaggttatagaacacat |
322 |
Q |
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||||||||||||||||||||||||||| |
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| T |
10194133 |
ctactggtataaggttatagaacacat |
10194107 |
T |
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