View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17128_high_3 (Length: 249)
Name: NF17128_high_3
Description: NF17128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17128_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 2 - 237
Target Start/End: Original strand, 22572512 - 22572746
Alignment:
| Q |
2 |
taactaaatttgtgtcatatatttttcaaaagcaataagttattattagatattgaacttaattcagccttacacaaataattggtggtcacactcttca |
101 |
Q |
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| T |
22572512 |
taactaaatttgtgtcatatatttttcaaaagcaataagttattattagatattgaacttaattcagccttacacaaataattggt-gtcacactcttca |
22572610 |
T |
|
| Q |
102 |
taattattcttttgggcattatctttttccattattgacttgnnnnnnnctcaatcatcatggtccaccattgtcaagagagatggcttgtttccattaa |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22572611 |
taattattcttttgggcattatctttttccattattgacttggttttttctcaatcatcatggtccaccattgtcaagagagatggcttgtttccattaa |
22572710 |
T |
|
| Q |
202 |
atctcaacaaacgtgtagctactcaccacacatatt |
237 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
22572711 |
atctcaacaaacgtgtagctactcaccacacatatt |
22572746 |
T |
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