View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1712_low_26 (Length: 286)
Name: NF1712_low_26
Description: NF1712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1712_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 32268396 - 32268646
Alignment:
| Q |
26 |
tacattattcatgttctgctcttttaatgcactgattagtaacgtaaattttaaaatgaaaggtaaacattaacttggtaagttcataatcgtatttgaa |
125 |
Q |
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| T |
32268396 |
tacattattcatgttctgctcttttaatgcactaattagtaacgtaaattttaaaatgaaaggtaaacattaacttggtaagttcataatcgtatttgaa |
32268495 |
T |
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| Q |
126 |
tgttaaacttttcaactctggttaatggtaaggatttgattacaaatctcggaactatagttgtacaatatttgtttaacctattatagatacaaaatat |
225 |
Q |
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| T |
32268496 |
tgttaaacttttcaactctggttaatggtaaggatttgattacaaatctcggaactatagttgtacaatatttgtttaacctattatagatacaaaatat |
32268595 |
T |
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| Q |
226 |
tcaccgtcattaaagaaattaatctccacccataaacttgttgaagtataa |
276 |
Q |
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| T |
32268596 |
tcaccgtcattaaagaaattaatctccacccataaacttgttgaaatataa |
32268646 |
T |
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