View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1712_low_34 (Length: 253)
Name: NF1712_low_34
Description: NF1712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1712_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 34384174 - 34383979
Alignment:
| Q |
17 |
atctcaccgataggggtttgagaaaatccaagaattttgaagacgaataatcaaacgagaacaccagaccatacccacatgaaagatagaacaaaatctg |
116 |
Q |
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| T |
34384174 |
atctcaccgataggggtatgagaaaatccaagaattttgaagacgaataatcgaacgagaacaccagaccatacccacatgaaagatagaacaaaatctg |
34384075 |
T |
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| Q |
117 |
acactaaaaccaaactactttgtctttccatcttcaacgacgataacaagaacaacaagttctatgaatttgaggatgtttttgtgtttggaatct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34384074 |
acactaaaaccaaactactttgtctttccatcttcaacgacgataacaagaacaacaagttctatgaatttgaggatgtttttgtgtttggaatct |
34383979 |
T |
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