View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1712_low_48 (Length: 233)

Name: NF1712_low_48
Description: NF1712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1712_low_48
NF1712_low_48
[»] chr1 (42 HSPs)
chr1 (1-176)||(12504878-12505049)
chr1 (190-233)||(25865971-25866014)
chr1 (190-233)||(25866728-25866771)
chr1 (190-233)||(27115508-27115551)
chr1 (190-233)||(47512140-47512183)
chr1 (190-233)||(51760056-51760099)
chr1 (190-233)||(52371000-52371043)
chr1 (195-233)||(27114865-27114903)
chr1 (190-232)||(28999857-28999899)
chr1 (195-233)||(32824190-32824228)
chr1 (195-233)||(47511549-47511587)
chr1 (195-233)||(51760221-51760259)
chr1 (195-233)||(51760728-51760766)
chr1 (196-233)||(20170583-20170620)
chr1 (196-233)||(52371756-52371793)
chr1 (190-233)||(4388010-4388053)
chr1 (190-233)||(25432513-25432556)
chr1 (190-233)||(28309779-28309822)
chr1 (190-233)||(32823475-32823518)
chr1 (190-233)||(52371165-52371208)
chr1 (195-233)||(20170742-20170780)
chr1 (195-233)||(20171218-20171256)
chr1 (195-233)||(32824030-32824068)
chr1 (195-233)||(37694675-37694713)
chr1 (195-233)||(51760568-51760606)
chr1 (196-233)||(25866136-25866173)
chr1 (196-233)||(39195062-39195099)
chr1 (190-226)||(52371847-52371883)
chr1 (190-233)||(39193598-39193641)
chr1 (190-233)||(47511384-47511427)
chr1 (190-232)||(3978061-3978103)
chr1 (190-232)||(3979370-3979412)
chr1 (195-233)||(20171058-20171096)
chr1 (190-232)||(25035375-25035417)
chr1 (190-232)||(25040588-25040630)
chr1 (195-233)||(32823597-32823635)
chr1 (195-233)||(46280827-46280865)
chr1 (195-233)||(47511980-47512018)
chr1 (190-232)||(50678383-50678425)
chr1 (196-233)||(25866569-25866606)
chr1 (195-232)||(27114705-27114742)
chr1 (190-222)||(31860525-31860557)
[»] chr8 (32 HSPs)
chr8 (190-233)||(3272081-3272124)
chr8 (190-233)||(15989161-15989204)
chr8 (190-233)||(21551939-21551982)
chr8 (190-233)||(21552985-21553028)
chr8 (190-233)||(39349495-39349538)
chr8 (190-232)||(3271177-3271219)
chr8 (195-233)||(30865181-30865219)
chr8 (196-233)||(40102854-40102891)
chr8 (190-233)||(15989021-15989064)
chr8 (190-233)||(15989326-15989369)
chr8 (190-233)||(29441633-29441676)
chr8 (190-233)||(40102238-40102281)
chr8 (190-233)||(40102401-40102444)
chr8 (190-233)||(40102994-40103037)
chr8 (195-233)||(3612486-3612524)
chr8 (190-232)||(4675769-4675811)
chr8 (195-233)||(4675934-4675972)
chr8 (195-233)||(21552105-21552143)
chr8 (195-233)||(21553151-21553189)
chr8 (196-233)||(3271342-3271379)
chr8 (195-232)||(21553765-21553802)
chr8 (190-233)||(3271915-3271958)
chr8 (190-233)||(8502330-8502373)
chr8 (190-233)||(30864511-30864554)
chr8 (190-233)||(41178726-41178769)
chr8 (190-232)||(3612640-3612682)
chr8 (190-232)||(7561816-7561858)
chr8 (190-232)||(24706269-24706311)
chr8 (190-227)||(4881162-4881199)
chr8 (196-233)||(14433645-14433682)
chr8 (196-233)||(21553605-21553642)
chr8 (196-233)||(30865022-30865059)
[»] chr7 (41 HSPs)
chr7 (190-233)||(10338369-10338412)
chr7 (190-233)||(29754742-29754785)
chr7 (190-233)||(43704625-43704668)
chr7 (195-233)||(3699803-3699841)
chr7 (195-233)||(8439948-8439986)
chr7 (195-233)||(29754582-29754620)
chr7 (195-233)||(32610866-32610904)
chr7 (195-233)||(37375150-37375188)
chr7 (195-233)||(47809642-47809680)
chr7 (196-233)||(6772911-6772948)
chr7 (195-232)||(37373716-37373753)
chr7 (190-230)||(37725896-37725936)
chr7 (190-233)||(4229113-4229156)
chr7 (190-233)||(32610701-32610744)
chr7 (190-233)||(33228864-33228907)
chr7 (190-233)||(37373551-37373594)
chr7 (190-233)||(40501511-40501554)
chr7 (190-233)||(43705598-43705641)
chr7 (190-233)||(47810195-47810238)
chr7 (195-233)||(33229029-33229067)
chr7 (195-233)||(35087858-35087896)
chr7 (195-233)||(40501420-40501458)
chr7 (196-233)||(33229589-33229626)
chr7 (196-233)||(47809513-47809550)
chr7 (190-230)||(43705483-43705523)
chr7 (190-225)||(1885305-1885340)
chr7 (190-233)||(6772745-6772788)
chr7 (190-225)||(8439783-8439818)
chr7 (190-233)||(10338204-10338247)
chr7 (190-233)||(36702794-36702837)
chr7 (190-225)||(40501250-40501285)
chr7 (190-232)||(18668780-18668822)
chr7 (190-232)||(18670560-18670602)
chr7 (190-232)||(18801232-18801274)
chr7 (190-232)||(19848891-19848933)
chr7 (190-232)||(21171312-21171354)
chr7 (195-233)||(33229429-33229467)
chr7 (195-233)||(35087453-35087491)
chr7 (195-233)||(37374658-37374696)
chr7 (195-233)||(47810035-47810073)
chr7 (196-224)||(43704723-43704751)
[»] chr6 (17 HSPs)
chr6 (190-233)||(5999639-5999682)
chr6 (190-233)||(12202214-12202257)
chr6 (190-233)||(17916525-17916568)
chr6 (190-233)||(21749858-21749901)
chr6 (195-233)||(11104433-11104471)
chr6 (195-233)||(12203167-12203205)
chr6 (195-233)||(17915731-17915769)
chr6 (195-233)||(17916365-17916403)
chr6 (196-233)||(21749699-21749736)
chr6 (190-233)||(8224394-8224437)
chr6 (190-233)||(12202348-12202391)
chr6 (190-233)||(12203327-12203370)
chr6 (190-233)||(33328392-33328435)
chr6 (195-233)||(17915891-17915929)
chr6 (190-232)||(27440232-27440274)
chr6 (190-225)||(19655042-19655077)
chr6 (190-233)||(21749270-21749313)
[»] chr5 (32 HSPs)
chr5 (190-233)||(2472347-2472390)
chr5 (190-233)||(2472486-2472529)
chr5 (190-233)||(6914868-6914911)
chr5 (190-233)||(12937938-12937981)
chr5 (190-233)||(12952089-12952132)
chr5 (190-233)||(16802218-16802261)
chr5 (190-233)||(32780138-32780181)
chr5 (190-232)||(37371074-37371116)
chr5 (195-232)||(5820579-5820616)
chr5 (196-233)||(12952677-12952714)
chr5 (190-231)||(16802347-16802388)
chr5 (180-233)||(21306773-21306826)
chr5 (180-233)||(21314611-21314664)
chr5 (195-232)||(38471311-38471348)
chr5 (190-233)||(1982729-1982772)
chr5 (190-233)||(12952790-12952833)
chr5 (195-233)||(37371239-37371277)
chr5 (196-233)||(12938528-12938565)
chr5 (195-232)||(37380356-37380393)
chr5 (190-230)||(6914732-6914772)
chr5 (190-233)||(1982894-1982937)
chr5 (190-233)||(3077040-3077083)
chr5 (190-233)||(8705872-8705915)
chr5 (190-233)||(12938687-12938730)
chr5 (190-233)||(19050995-19051038)
chr5 (190-233)||(38477189-38477232)
chr5 (190-232)||(10085902-10085944)
chr5 (195-233)||(15154123-15154161)
chr5 (190-232)||(18693715-18693757)
chr5 (190-232)||(21387654-21387696)
chr5 (190-232)||(32411981-32412023)
chr5 (196-233)||(5820739-5820776)
[»] chr4 (29 HSPs)
chr4 (190-233)||(15317719-15317762)
chr4 (190-233)||(23203018-23203061)
chr4 (190-233)||(26202442-26202485)
chr4 (195-233)||(23202421-23202459)
chr4 (195-233)||(28510354-28510392)
chr4 (195-233)||(36645317-36645355)
chr4 (196-233)||(23202263-23202300)
chr4 (195-232)||(28189354-28189391)
chr4 (196-233)||(32509021-32509058)
chr4 (190-232)||(8510872-8510914)
chr4 (190-232)||(8516909-8516951)
chr4 (195-233)||(23202858-23202896)
chr4 (195-233)||(26202282-26202320)
chr4 (195-233)||(28509769-28509807)
chr4 (195-233)||(28509929-28509967)
chr4 (195-233)||(41690099-41690137)
chr4 (190-233)||(26428673-26428716)
chr4 (196-231)||(34457626-34457661)
chr4 (190-233)||(56297735-56297778)
chr4 (190-232)||(3217666-3217708)
chr4 (195-233)||(15317884-15317921)
chr4 (190-232)||(28103543-28103585)
chr4 (199-233)||(34457474-34457508)
chr4 (195-233)||(36644921-36644959)
chr4 (195-233)||(41689942-41689980)
chr4 (196-233)||(28370485-28370522)
chr4 (196-233)||(32508449-32508485)
chr4 (195-232)||(32508608-32508645)
chr4 (196-232)||(30683084-30683120)
[»] chr3 (36 HSPs)
chr3 (190-233)||(7575534-7575577)
chr3 (190-233)||(19283751-19283794)
chr3 (190-233)||(23886133-23886176)
chr3 (190-233)||(46987342-46987385)
chr3 (190-233)||(46988525-46988568)
chr3 (190-233)||(51214222-51214265)
chr3 (195-233)||(7583892-7583930)
chr3 (190-232)||(12105376-12105418)
chr3 (195-233)||(13997280-13997318)
chr3 (190-232)||(23886883-23886925)
chr3 (196-233)||(23886299-23886336)
chr3 (196-233)||(51214063-51214100)
chr3 (196-232)||(54109679-54109715)
chr3 (190-233)||(7583727-7583770)
chr3 (190-233)||(12106563-12106606)
chr3 (190-233)||(13041964-13042007)
chr3 (190-233)||(13050041-13050084)
chr3 (190-233)||(30431392-30431435)
chr3 (190-233)||(30838526-30838569)
chr3 (190-233)||(44384352-44384395)
chr3 (190-233)||(51213468-51213511)
chr3 (190-233)||(51213633-51213676)
chr3 (195-233)||(5810066-5810104)
chr3 (195-233)||(19283917-19283955)
chr3 (195-233)||(30431554-30431592)
chr3 (195-233)||(30431977-30432015)
chr3 (190-232)||(54109513-54109555)
chr3 (196-233)||(12106404-12106441)
chr3 (196-233)||(46987506-46987543)
chr3 (190-233)||(12105541-12105584)
chr3 (190-233)||(42570029-42570072)
chr3 (190-232)||(11220715-11220757)
chr3 (195-233)||(13997440-13997478)
chr3 (195-233)||(30432668-30432706)
chr3 (195-233)||(30838364-30838402)
chr3 (190-232)||(54654023-54654065)
[»] chr2 (27 HSPs)
chr2 (190-233)||(43015556-43015599)
chr2 (195-233)||(27262735-27262773)
chr2 (190-232)||(27264630-27264672)
chr2 (190-231)||(43019304-43019345)
chr2 (190-233)||(5435176-5435219)
chr2 (190-233)||(15808097-15808140)
chr2 (190-233)||(15816722-15816765)
chr2 (190-233)||(17858640-17858683)
chr2 (190-233)||(17859322-17859365)
chr2 (190-233)||(42772455-42772498)
chr2 (190-232)||(14482148-14482190)
chr2 (190-232)||(20948419-20948461)
chr2 (190-232)||(21545126-21545168)
chr2 (196-233)||(17858481-17858518)
chr2 (190-225)||(5564076-5564111)
chr2 (190-225)||(5565209-5565244)
chr2 (190-233)||(17179307-17179350)
chr2 (190-233)||(27990391-27990434)
chr2 (190-233)||(28076924-28076967)
chr2 (190-232)||(7038389-7038431)
chr2 (198-232)||(21541086-21541120)
chr2 (195-233)||(27262895-27262933)
chr2 (190-232)||(30202710-30202752)
chr2 (196-233)||(11391895-11391932)
chr2 (196-233)||(11408556-11408593)
chr2 (197-233)||(14481953-14481989)
chr2 (196-232)||(27657804-27657840)
[»] scaffold0630 (2 HSPs)
scaffold0630 (195-233)||(3108-3146)
scaffold0630 (195-232)||(2032-2069)
[»] scaffold0081 (2 HSPs)
scaffold0081 (195-233)||(1876-1914)
scaffold0081 (195-233)||(2036-2074)
[»] scaffold0007 (3 HSPs)
scaffold0007 (195-233)||(28775-28813)
scaffold0007 (195-232)||(28154-28191)
scaffold0007 (195-232)||(28315-28352)
[»] scaffold0003 (1 HSPs)
scaffold0003 (190-232)||(47087-47129)
[»] scaffold0839 (1 HSPs)
scaffold0839 (190-233)||(42-85)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 12505049 - 12504878
Alignment:
Q  1 gctggtgattgttgatggtggtggaagattgtggtgaagatgctgccatgtgagatatgaaactcgatattttgatagctaggttaaatggtttggttat 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    ||||||||||||||||||    
T  12505049 gctggtgattgctgatggtggtggaagattgtggtgaagatgctgccatgggagatatgaaactcgatattttgatag----gttaaatggtttggttat 12504954  T
Q  101 gactaatgggtatagctgttttctttataaagagtggtagtagtagaactcatgatatgtgttttattaaaattta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12504953 gactaatgggtatagctgttttctttataaagagtggtagtagtagaactcatgatatgtgttttattaaaattta 12504878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 25865971 - 25866014
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  25865971 cttaacttatttttgaatttcattttggtcccttaactttaaac 25866014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 25866771 - 25866728
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  25866771 cttaacttatttttgaatttcattttggtcccttaactttaaac 25866728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 27115551 - 27115508
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  27115551 cttaacttatttttgaatttcattttggtcccttaactttaaac 27115508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 47512183 - 47512140
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  47512183 cttaacttatttttgaatttcattttggtcccttaactttaaac 47512140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 51760056 - 51760099
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  51760056 cttaacttatttttgaatttcattttggtcccttaactttaaac 51760099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 52371000 - 52371043
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  52371000 cttaacttatttttgaatttcattttggtcccttaactttaaac 52371043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 27114903 - 27114865
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27114903 cttatttttgaatttcattttggtcccttaactttaaac 27114865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 28999857 - 28999899
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  28999857 cttaacttatttttgaatttcattttggtcccttaactttaaa 28999899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 32824228 - 32824190
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32824228 cttatttttgaatttcattttggtcccttaactttaaac 32824190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 47511587 - 47511549
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47511587 cttatttttgaatttcattttggtcccttaactttaaac 47511549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 51760259 - 51760221
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51760259 cttatttttgaatttcattttggtcccttaactttaaac 51760221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 51760766 - 51760728
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51760766 cttatttttgaatttcattttggtcccttaactttaaac 51760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 20170583 - 20170620
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20170583 ttatttttgaatttcattttggtcccttaactttaaac 20170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 52371756 - 52371793
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52371756 ttatttttgaatttcattttggtcccttaactttaaac 52371793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 4388010 - 4388053
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  4388010 cttaacttatttttgaatttcattttgatcccttaactttaaac 4388053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 25432513 - 25432556
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  25432513 cttaacttatttttgaatttcattttgatcccttaactttaaac 25432556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 28309779 - 28309822
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  28309779 cttaacttattttttaatttcattttggtcccttaactttaaac 28309822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 32823475 - 32823518
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  32823475 cttaacttatttttgaattttattttggtcccttaactttaaac 32823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 52371208 - 52371165
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  52371208 cttaacttatttttgaatttcattttgatcccttaactttaaac 52371165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 20170780 - 20170742
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  20170780 cttatttttgaatttcattttgatcccttaactttaaac 20170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 20171256 - 20171218
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20171256 cttatttttgaattttattttggtcccttaactttaaac 20171218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 32824030 - 32824068
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  32824030 cttatttttgaatttcattttgatcccttaactttaaac 32824068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 37694675 - 37694713
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  37694675 cttatttttaaatttcattttggtcccttaactttaaac 37694713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 51760568 - 51760606
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  51760568 cttatttttgaatttcattttgatcccttaactttaaac 51760606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 25866173 - 25866136
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25866173 ttatttttgaatttcattttgatcccttaactttaaac 25866136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 39195099 - 39195062
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39195099 ttattttttaatttcattttggtcccttaactttaaac 39195062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 52371883 - 52371847
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaac 226  Q
    |||| ||||||||||||||||||||||||||||||||    
T  52371883 cttaacttatttttgaatttcattttggtcccttaac 52371847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 39193598 - 39193641
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||    
T  39193598 cttaacttattttttaattttattttggtcccttaactttaaac 39193641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 47511384 - 47511427
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  47511384 cttaacttatttttgaatttcattttgatcccttaattttaaac 47511427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 3978061 - 3978103
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||||||| |||||| ||||    
T  3978061 cttaacttatttttgaatttcattttggtcctttaactataaa 3978103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 3979412 - 3979370
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  3979412 cttaacttatttttggatttcattttggtcccttaactataaa 3979370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 20171058 - 20171096
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  20171058 cttattttttaatttcattttgatcccttaactttaaac 20171096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 25035375 - 25035417
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||    
T  25035375 cttaacttatttttgaatttcaatttggtcccctaactttaaa 25035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 25040588 - 25040630
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||    
T  25040588 cttaacttatttttgaatttcaatttggtcccctaactttaaa 25040630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 32823635 - 32823597
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  32823635 cttatttttgaattttattttggtcccctaactttaaac 32823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 46280865 - 46280827
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  46280865 cttatttttgaattttattttggtcccttaattttaaac 46280827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 47511980 - 47512018
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  47511980 cttatttttgaattttattttgatcccttaactttaaac 47512018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 50678383 - 50678425
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||| |||||||||| ||||    
T  50678383 cttaacttatttttgaatttcattttgatcccttaactataaa 50678425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 25866569 - 25866606
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  25866569 ttattttcgaattttattttggtcccttaactttaaac 25866606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 27114705 - 27114742
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  27114705 cttatttttgaattttattttggtcccttaattttaaa 27114742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 31860557 - 31860525
Alignment:
Q  190 cttatcttatttttgaatttcattttggtccct 222  Q
    |||| ||||||||||||||||||||||||||||    
T  31860557 cttaacttatttttgaatttcattttggtccct 31860525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 3272124 - 3272081
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  3272124 cttaacttatttttgaatttcattttggtcccttaactttaaac 3272081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 15989161 - 15989204
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  15989161 cttaacttatttttgaatttcattttggtcccttaactttaaac 15989204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 21551939 - 21551982
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  21551939 cttaacttatttttgaatttcattttggtcccttaactttaaac 21551982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 21552985 - 21553028
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  21552985 cttaacttatttttgaatttcattttggtcccttaactttaaac 21553028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 39349538 - 39349495
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  39349538 cttaacttatttttgaatttcattttggtcccttaactttaaac 39349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 3271177 - 3271219
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  3271177 cttaacttatttttgaatttcattttggtcccttaactttaaa 3271219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 30865219 - 30865181
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30865219 cttatttttgaatttcattttggtcccttaactttaaac 30865181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 40102854 - 40102891
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40102854 ttatttttgaatttcattttggtcccttaactttaaac 40102891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 15989021 - 15989064
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  15989021 cttaacttatttttaaatttcattttggtcccttaactttaaac 15989064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 15989369 - 15989326
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  15989369 cttaacttatttttgaatttcgttttggtcccttaactttaaac 15989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 29441633 - 29441676
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  29441633 cttaacttatttttgaattttattttggtcccttaactttaaac 29441676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 40102238 - 40102281
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  40102238 cttaacttatttttgaatttcattttggtcctttaactttaaac 40102281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 40102444 - 40102401
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  40102444 cttagcttatttttgaatttcattttgatcccttaactttaaac 40102401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 40103037 - 40102994
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  40103037 cttaacttatttttgaatttcattttagtcccttaactttaaac 40102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 3612486 - 3612524
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3612486 cttatttttaaatttcattttggtcccttaactttaaac 3612524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 4675769 - 4675811
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  4675769 cttaacttatttttgaattttattttggtcccttaactttaaa 4675811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 4675972 - 4675934
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4675972 cttatttttgaattttattttggtcccttaactttaaac 4675934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 21552143 - 21552105
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21552143 cttatttttgaattttattttggtcccttaactttaaac 21552105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 21553189 - 21553151
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21553189 cttatttttgaattttattttggtcccttaactttaaac 21553151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 3271379 - 3271342
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3271379 ttatttttgaatttcattttggtctcttaactttaaac 3271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 21553802 - 21553765
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21553802 cttatttttgaatttcattttggtcccataactttaaa 21553765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 3271915 - 3271958
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  3271915 cttaacttatttttgaatttcattttgatcccttaattttaaac 3271958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 8502373 - 8502330
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  8502373 cttaacttatttttgaatttcaatttggtcccctaactttaaac 8502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 30864554 - 30864511
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  30864554 cttaacttatttttgaatttcattttgatcccttaattttaaac 30864511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 41178769 - 41178726
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  41178769 cttaacttatttttgaatttcaatttggtcccctaactttaaac 41178726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 3612682 - 3612640
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||    
T  3612682 cttaacttatttttgaattttattttggtctcttaactttaaa 3612640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 7561816 - 7561858
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||| ||||||||||||||||||||    
T  7561816 cttaacttatttttggatttcaatttggtcccttaactttaaa 7561858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 24706311 - 24706269
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||| ||||||||||||    
T  24706311 cttaacttatttttggatttcattttggtctcttaactttaaa 24706269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 4881162 - 4881199
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaact 227  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  4881162 cttaacttatttttgagtttcattttggtcccttaact 4881199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 14433645 - 14433682
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  14433645 ttatttttgaatttcaatttggtcccctaactttaaac 14433682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 21553605 - 21553642
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||| || |||||||||||||    
T  21553605 ttatttttgaatttcattttgatcgcttaactttaaac 21553642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 30865022 - 30865059
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  30865022 ttatttttgaatttcattctggtcccataactttaaac 30865059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 10338412 - 10338369
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  10338412 cttaacttatttttgaatttcattttggtcccttaactttaaac 10338369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 29754785 - 29754742
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  29754785 cttaacttatttttgaatttcattttggtcccttaactttaaac 29754742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 43704625 - 43704668
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  43704625 cttaacttatttttgaatttcattttggtcccttaactttaaac 43704668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 3699841 - 3699803
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3699841 cttatttttgaatttcattttggtcccttaactttaaac 3699803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 8439986 - 8439948
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8439986 cttatttttgaatttcattttggtcccttaactttaaac 8439948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 29754582 - 29754620
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29754582 cttatttttgaatttcattttggtcccttaactttaaac 29754620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 32610904 - 32610866
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32610904 cttatttttgaatttcattttggtcccttaactttaaac 32610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 37375188 - 37375150
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37375188 cttatttttgaatttcattttggtcccttaactttaaac 37375150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 47809680 - 47809642
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47809680 cttatttttgaatttcattttggtcccttaactttaaac 47809642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 6772948 - 6772911
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6772948 ttatttttgaatttcattttggtcccttaactttaaac 6772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 37373753 - 37373716
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37373753 cttatttttgaatttcattttggtcccttaactttaaa 37373716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 37725896 - 37725936
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaacttta 230  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  37725896 cttaacttatttttgaatttcattttggtcccttaacttta 37725936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 4229113 - 4229156
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  4229113 cttaacttattttttaatttcattttggtcccttaactttaaac 4229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 32610701 - 32610744
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  32610701 cttaacttatttttgaatttcattttgatcccttaactttaaac 32610744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 33228864 - 33228907
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
T  33228864 cttaacttatttttgaatttcattttggtcccttaattttaaac 33228907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 37373551 - 37373594
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||| ||||||||||||||    
T  37373551 cttaacttatttttgaatttcattttggtaccttaactttaaac 37373594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 40501554 - 40501511
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
T  40501554 cttaacttatttttgaatttcattttggtcccttaattttaaac 40501511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 43705641 - 43705598
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  43705641 cttaacttatttttgaatttcattttgatcccttaactttaaac 43705598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 47810238 - 47810195
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  47810238 cttaacttatttttgaattacattttggtcccttaactttaaac 47810195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 33229067 - 33229029
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  33229067 cttatttttgaatttcattttggtcctttaactttaaac 33229029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 35087858 - 35087896
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35087858 cttatttttgaatctcattttggtcccttaactttaaac 35087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 40501458 - 40501420
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40501458 cttatttttgaatttcattttggtcccttaattttaaac 40501420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 33229626 - 33229589
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||| |||||||    
T  33229626 ttatttttgaatttcattttggtcccttaattttaaac 33229589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 47809513 - 47809550
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  47809513 ttatttttgaatttcattttggttccttaactttaaac 47809550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 43705483 - 43705523
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaacttta 230  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  43705483 cttaacttatttttgaatttcattttgatcccttaacttta 43705523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 1885340 - 1885305
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  1885340 cttaacttatttttgaatttcattttggtcccttaa 1885305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 6772745 - 6772788
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||    
T  6772745 cttaacttatttttgaattccattttggtcctttaactttaaac 6772788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 8439783 - 8439818
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  8439783 cttaacttatttttgaatttcattttggtcccttaa 8439818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 10338204 - 10338247
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||    
T  10338204 cttaacttatttttgaatttcattttgatccctcaactttaaac 10338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 36702794 - 36702837
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||  ||||||||||||||||||||||||||||    
T  36702794 cttaacttatttttagatttcattttggtcccttaactttaaac 36702837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 40501250 - 40501285
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  40501250 cttaacttatttttgaatttcattttggtcccttaa 40501285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 18668780 - 18668822
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||||||||  |||||||||    
T  18668780 cttaacttatttttgaatttcattttggtccccaaactttaaa 18668822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 18670602 - 18670560
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||| ||||||||||||||||||||||    
T  18670602 cttaacttatttttggattttattttggtcccttaactttaaa 18670560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 18801232 - 18801274
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||    
T  18801232 cttaacttatttttgaatttcattttggtcccctaactataaa 18801274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 19848933 - 19848891
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  19848933 cttaacttatttttggatttcattttggtcccttaactataaa 19848891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 21171312 - 21171354
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||    
T  21171312 cttaacttatttttgaatttcaatttggtcccctaactttaaa 21171354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 33229429 - 33229467
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  33229429 cttatttttgaattttattttgatcccttaactttaaac 33229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 35087491 - 35087453
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  35087491 cttatttttgaatttcattttgatcctttaactttaaac 35087453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 37374658 - 37374696
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37374658 cttatttttgaattttattttgatcccttaactttaaac 37374696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 47810035 - 47810073
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  47810035 cttatttttgaattttattttgatcccttaactttaaac 47810073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 43704751 - 43704723
Alignment:
Q  196 ttatttttgaatttcattttggtccctta 224  Q
    |||||||||||||||||||||||||||||    
T  43704751 ttatttttgaatttcattttggtccctta 43704723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 5999682 - 5999639
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  5999682 cttaacttatttttgaatttcattttggtcccttaactttaaac 5999639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 12202214 - 12202257
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12202214 cttaacttatttttgaatttcattttggtcccttaactttaaac 12202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 17916568 - 17916525
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  17916568 cttaacttatttttgaatttcattttggtcccttaactttaaac 17916525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 21749901 - 21749858
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  21749901 cttaacttatttttgaatttcattttggtcccttaactttaaac 21749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 11104471 - 11104433
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11104471 cttatttttgaatttcattttggtcccttaactttaaac 11104433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 12203167 - 12203205
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12203167 cttatttttgaatttcattttggtcccttaactttaaac 12203205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 17915731 - 17915769
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17915731 cttatttttgaatttcattttggtcccttaactttaaac 17915769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 17916365 - 17916403
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17916365 cttatttttgaatttcattttggtcccttaactttaaac 17916403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 21749699 - 21749736
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21749699 ttatttttgaatttcattttggtcccttaactttaaac 21749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 8224437 - 8224394
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  8224437 cttaacttaattttgaatttcattttggtcccttaactttaaac 8224394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12202391 - 12202348
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  12202391 cttaacttattttttaatttcattttggtcccttaactttaaac 12202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12203370 - 12203327
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  12203370 cttaacttatttttgaatttcattttggtcctttaactttaaac 12203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 33328392 - 33328435
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  33328392 cttaacttatttttgaatttcattttgatcccttaactttaaac 33328435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 17915929 - 17915891
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  17915929 cttatttttgaatttcattttgatcccttaactttaaac 17915891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 27440274 - 27440232
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||| |||||||||||||||    
T  27440274 cttaacttatttttgaatttcattttgatcccttaactttaaa 27440232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 19655077 - 19655042
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  19655077 cttaacttatttttgaatttcattttggtcccttaa 19655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 21749313 - 21749270
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||    
T  21749313 cttaacttatttttgaatttcattttgatcctttaactttaaac 21749270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 2472347 - 2472390
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  2472347 cttaacttatttttgaatttcattttggtcccttaactttaaac 2472390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 2472529 - 2472486
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  2472529 cttaacttatttttgaatttcattttggtcccttaactttaaac 2472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 6914911 - 6914868
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  6914911 cttaacttatttttgaatttcattttggtcccttaactttaaac 6914868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12937981 - 12937938
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12937981 cttaacttatttttgaatttcattttggtcccttaactttaaac 12937938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12952132 - 12952089
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12952132 cttaacttatttttgaatttcattttggtcccttaactttaaac 12952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 16802218 - 16802261
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  16802218 cttaacttatttttgaatttcattttggtcccttaactttaaac 16802261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 32780181 - 32780138
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  32780181 cttaacttatttttgaatttcattttggtcccttaactttaaac 32780138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 37371074 - 37371116
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  37371074 cttaacttatttttgaatttcattttggtcccttaactttaaa 37371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 5820579 - 5820616
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5820579 cttatttttgaatttcattttggtcccttaactttaaa 5820616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 12952677 - 12952714
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12952677 ttatttttgaatttcattttggtcccttaactttaaac 12952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 16802388 - 16802347
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaa 231  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  16802388 cttaacttatttttgaatttcattttggtcccttaactttaa 16802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 21306826 - 21306773
Alignment:
Q  180 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  21306826 tgctttggtccttaacttatttttgaatttcattttcgtcccttaactttaaac 21306773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 21314664 - 21314611
Alignment:
Q  180 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  21314664 tgctttggtccttaacttatttttgaatttcattttcgtcccttaactttaaac 21314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 38471311 - 38471348
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38471311 cttatttttgaatttcattttggtcccttaactttaaa 38471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 1982729 - 1982772
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  1982729 cttaacttatttttgaattttattttggtcccttaactttaaac 1982772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12952833 - 12952790
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  12952833 cttaacttatttttaaatttcattttggtcccttaactttaaac 12952790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 37371277 - 37371239
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  37371277 cttatttttgaatttcattttggtcccttaactataaac 37371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 12938528 - 12938565
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  12938528 ttatttttgaatttcattttggtcctttaactttaaac 12938565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 37380393 - 37380356
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  37380393 cttatttttgaatttcattttggtcccgtaactttaaa 37380356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 6914732 - 6914772
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaacttta 230  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  6914732 cttaacttatttttgaatttcattttggtcccataacttta 6914772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 1982937 - 1982894
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||    
T  1982937 cttaacttattttttaatttcattttcgtcccttaactttaaac 1982894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 3077083 - 3077040
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||    
T  3077083 cttaacttatttttgaatttcaatttgatcccttaactttaaac 3077040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 8705872 - 8705915
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||    
T  8705872 cttaacttatttttgaatttcaatttcgtcccttaactttaaac 8705915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12938730 - 12938687
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||    
T  12938730 cttaacttatttttaaatttcattttggtctcttaactttaaac 12938687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 19051038 - 19050995
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  19051038 cttaacttatttttgaatttcaatttggtcccctaactttaaac 19050995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 38477232 - 38477189
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||    
T  38477232 cttaacttatgtttgaatttcattttgatcccttaactttaaac 38477189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 10085944 - 10085902
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||    
T  10085944 cttaacttatttttgaatttcactttggtctcttaactttaaa 10085902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 15154161 - 15154123
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  15154161 cttatttttgaatttcaatttggtcccctaactttaaac 15154123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 18693715 - 18693757
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||    
T  18693715 cttaacttatttttgaattttattttggtcccttaactataaa 18693757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 21387654 - 21387696
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||    
T  21387654 cttaacttatttttgaatttcattttggtcccctaactataaa 21387696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 32411981 - 32412023
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||| ||||||||||||||||||||    
T  32411981 cttaacttatttttggatttcaatttggtcccttaactttaaa 32412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 5820776 - 5820739
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5820776 ttatttttaaatttcattttagtcccttaactttaaac 5820739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 15317719 - 15317762
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  15317719 cttaacttatttttgaatttcattttggtcccttaactttaaac 15317762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 23203061 - 23203018
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  23203061 cttaacttatttttgaatttcattttggtcccttaactttaaac 23203018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 26202485 - 26202442
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  26202485 cttaacttatttttgaatttcattttggtcccttaactttaaac 26202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 23202459 - 23202421
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23202459 cttatttttgaatttcattttggtcccttaactttaaac 23202421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 28510354 - 28510392
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28510354 cttatttttgaatttcattttggtcccttaactttaaac 28510392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 36645317 - 36645355
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36645317 cttatttttgaatttcattttggtcccttaactttaaac 36645355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 23202263 - 23202300
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23202263 ttatttttgaatttcattttggtcccttaactttaaac 23202300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 28189391 - 28189354
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28189391 cttatttttgaatttcattttggtcccttaactttaaa 28189354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 32509058 - 32509021
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32509058 ttatttttgaatttcattttggtcccttaactttaaac 32509021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 8510872 - 8510914
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  8510872 cttaacttatttttgaatttcaatttggtcccttaactttaaa 8510914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 8516951 - 8516909
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  8516951 cttaacttatttttgaatttcaatttggtcccttaactttaaa 8516909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 23202858 - 23202896
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  23202858 cttatttttgaatttcattttgatcccttaactttaaac 23202896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 26202282 - 26202320
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26202282 cttatttttgaattttattttggtcccttaactttaaac 26202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 28509769 - 28509807
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  28509769 cttatttttaaatttcattttggtcccttaactttaaac 28509807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 28509967 - 28509929
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  28509967 cttatttttgaatttcattttgatcccttaactttaaac 28509929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 41690137 - 41690099
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41690137 cttatttttgaattttattttggtcccttaactttaaac 41690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 26428673 - 26428716
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  26428673 cttaacttatttttgaatttcagtttggtcccctaactttaaac 26428716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 34457661 - 34457626
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaa 231  Q
    |||||||||||||| |||||||||||||||||||||    
T  34457661 ttatttttgaattttattttggtcccttaactttaa 34457626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 56297778 - 56297735
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  56297778 cttaacttatttttgaatttcattttgatcccttaattttaaac 56297735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 3217708 - 3217666
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| |||||||| |||||||||||    
T  3217708 cttaacttatttttgaatttcactttggtcctttaactttaaa 3217666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 15317921 - 15317884
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  15317921 cttatttttgaatt-cattttggtcccttaactttaaac 15317884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 28103585 - 28103543
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  28103585 cttaacttatttttggatttcattttggtcccttaactataaa 28103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 34457474 - 34457508
Alignment:
Q  199 tttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  34457474 tttttgaatttcattttggtcctttaactttaaac 34457508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 36644959 - 36644921
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| || |||||||||||||    
T  36644959 cttatttttgaatttcattttgatctcttaactttaaac 36644921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 41689942 - 41689980
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  41689942 cttattttttaattttattttggtcccttaactttaaac 41689980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 28370485 - 28370522
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  28370485 ttatttttgaatttcaatttggtcccttaattttaaac 28370522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 32508449 - 32508485
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||| |||||||||||||||||||||||    
T  32508449 ttatttttgaattt-attttggtcccttaactttaaac 32508485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 32508645 - 32508608
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||||||||||||||||||||| | |||||||||||||    
T  32508645 cttatttttgaatttcattttgattccttaactttaaa 32508608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 30683120 - 30683084
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  30683120 ttatttttgattttcattttggtcccttaactataaa 30683084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 7575577 - 7575534
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  7575577 cttaacttatttttgaatttcattttggtcccttaactttaaac 7575534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 19283751 - 19283794
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  19283751 cttaacttatttttgaatttcattttggtcccttaactttaaac 19283794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 23886133 - 23886176
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  23886133 cttaacttatttttgaatttcattttggtcccttaactttaaac 23886176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 46987342 - 46987385
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  46987342 cttaacttatttttgaatttcattttggtcccttaactttaaac 46987385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 46988568 - 46988525
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  46988568 cttaacttatttttgaatttcattttggtcccttaactttaaac 46988525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 51214265 - 51214222
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  51214265 cttaacttatttttgaatttcattttggtcccttaactttaaac 51214222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 7583930 - 7583892
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7583930 cttatttttgaatttcattttggtcccttaactttaaac 7583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 12105376 - 12105418
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  12105376 cttaacttatttttgaatttcattttggtcccttaactttaaa 12105418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 13997280 - 13997318
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13997280 cttatttttgaatttcattttggtcccttaactttaaac 13997318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 23886925 - 23886883
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  23886925 cttaacttatttttgaatttcattttggtcccttaactttaaa 23886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 23886336 - 23886299
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23886336 ttatttttgaatttcattttggtcccttaactttaaac 23886299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 51214063 - 51214100
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51214063 ttatttttgaatttcattttggtcccttaactttaaac 51214100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 54109715 - 54109679
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  54109715 ttatttttgaatttcattttggtcccttaactttaaa 54109679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 7583727 - 7583770
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  7583727 cttaacttatttttgaatttcattttggtcacttaactttaaac 7583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12106606 - 12106563
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  12106606 cttaacttatttttgaatttcattttggtctcttaactttaaac 12106563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 13041964 - 13042007
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  13041964 cttaacttatttttgaatttcattttgatcccttaactttaaac 13042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 13050041 - 13050084
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  13050041 cttaacttatttttgaatttcattttgatcccttaactttaaac 13050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 30431392 - 30431435
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||||||||||||| |||||||    
T  30431392 cttaacttatttttgaatttcattttggtcccttaattttaaac 30431435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 30838569 - 30838526
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  30838569 cttaacttatttttgaattttattttggtcccttaactttaaac 30838526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 44384395 - 44384352
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  44384395 cttaacttatttttgaatttcattttagtcccttaactttaaac 44384352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 51213468 - 51213511
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  51213468 cttaacttatttttgaatttcattttcgtcccttaactttaaac 51213511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 51213676 - 51213633
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  51213676 cttaacttatttttgaatttcattttgatcccttaactttaaac 51213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 5810104 - 5810066
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  5810104 cttatttttgaatttcattttgatcccttaactttaaac 5810066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 19283955 - 19283917
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19283955 cttatttttgaattttattttggtcccttaactttaaac 19283917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 30431592 - 30431554
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  30431592 cttattttcgaatttcattttggtcccttaactttaaac 30431554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 30431977 - 30432015
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30431977 cttatttttgaatttcattttgatcccttaactttaaac 30432015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 54109513 - 54109555
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  54109513 cttaacttatttttgaatttcattttagtcccttaactttaaa 54109555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 12106404 - 12106441
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12106404 ttatttttgaatttaattttggtcccttaactttaaac 12106441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 46987543 - 46987506
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||| |||||||||||||||||||||||    
T  46987543 ttatttttgaattttattttggtcccttaactttaaac 46987506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 12105584 - 12105541
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||    
T  12105584 cttaacttatttttgaatttcattttgatccctcaactttaaac 12105541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 42570029 - 42570072
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  42570029 cttaacttatttttgaatttcaatttggtcccctaactttaaac 42570072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 11220757 - 11220715
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||    
T  11220757 cttaacttatttttgaatttcattttggtcccctaactataaa 11220715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 13997478 - 13997440
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  13997478 cttatttttgaattttattttgatcccttaactttaaac 13997440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 30432706 - 30432668
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  30432706 cttatttttaaatttcattttgatcccttaactttaaac 30432668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 30838364 - 30838402
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  30838364 cttatttttgaattttattttggtcacttaactttaaac 30838402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 54654065 - 54654023
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  54654065 cttaacttatttttggatttcattttggtcccttaactataaa 54654023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 43015556 - 43015599
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  43015556 cttaacttatttttgaatttcattttggtcccttaactttaaac 43015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 27262735 - 27262773
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27262735 cttatttttgaatttcattttggtcccttaactttaaac 27262773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 27264672 - 27264630
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  27264672 cttaacttatttttgaatttcattttggtcccttaactttaaa 27264630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 43019345 - 43019304
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaa 231  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  43019345 cttaacttatttttgaatttcattttggtcccttaactttaa 43019304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 5435176 - 5435219
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  5435176 cttaacttatatttgaatttcattttggtcccttaactttaaac 5435219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 15808097 - 15808140
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  15808097 cttaacttatttttgaatttcattttagtcccttaactttaaac 15808140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 15816765 - 15816722
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  15816765 cttaacttatttttgaatttcattttcgtcccttaactttaaac 15816722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 17858683 - 17858640
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  17858683 cttaacttatttttgaatttcattttgatcccttaactttaaac 17858640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 17859365 - 17859322
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||||||||||||| ||||||    
T  17859365 cttaacttatttttgaatttcattttggtcccttaacgttaaac 17859322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 42772455 - 42772498
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  42772455 cttaacttatttttgaatttcattttgatcccttaactttaaac 42772498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 14482190 - 14482148
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  14482190 cttaacttatttttgaatttcattttggttccttaactttaaa 14482148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 20948419 - 20948461
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  20948419 cttaacttatttttgaatttcaatttggtcccttaactttaaa 20948461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 21545168 - 21545126
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  21545168 cttaacttatttttggatttcattttggtcccttaactttaaa 21545126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 17858481 - 17858518
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17858481 ttatttttgaatttcgttttggtcccttaactttaaac 17858518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 5564076 - 5564111
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  5564076 cttaacttatttttgaatttcattttggtcccttaa 5564111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 5565244 - 5565209
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaa 225  Q
    |||| |||||||||||||||||||||||||||||||    
T  5565244 cttaacttatttttgaatttcattttggtcccttaa 5565209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 17179350 - 17179307
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  17179350 cttaacttatttttgaatttcaatttggtcccctaactttaaac 17179307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 27990391 - 27990434
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||    
T  27990391 cttaacttatttttgaattttattttggtcccttaaatttaaac 27990434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 28076924 - 28076967
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||    
T  28076924 cttaacttatttttgaattttattttggtcccttaaatttaaac 28076967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 7038431 - 7038389
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||| |||||||||||||||||||||| ||||    
T  7038431 cttaacttatttttggatttcattttggtcccttaactataaa 7038389  T

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Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 232
Target Start/End: Original strand, 21541086 - 21541120
Alignment:
Q  198 atttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||| |||||||||||||||||||||||||||    
T  21541086 atttttggatttcattttggtcccttaactttaaa 21541120  T

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Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 27262933 - 27262895
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  27262933 cttatttttgaatttcattttcatcccttaactttaaac 27262895  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 30202710 - 30202752
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||    
T  30202710 cttaacttatttttgaatttcaatttggtcccctaactttaaa 30202752  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 11391895 - 11391932
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  11391895 ttatttttgaatttcatttttatcccttaactttaaac 11391932  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 11408556 - 11408593
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaac 233  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  11408556 ttatttttgaatttcatttttatcccttaactttaaac 11408593  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 14481953 - 14481989
Alignment:
Q  197 tatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||  ||||||||||||||||    
T  14481953 tatttttgaatttcatttttatcccttaactttaaac 14481989  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 27657840 - 27657804
Alignment:
Q  196 ttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  27657840 ttatttttggattttattttggtcccttaactttaaa 27657804  T

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Target: scaffold0630 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 3146 - 3108
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3146 cttatttttgaatttcattttggtcccttaactttaaac 3108  T

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Target: scaffold0630; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 2032 - 2069
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||||||||  |||||||||||||||||||||||||||    
T  2032 cttatttttagatttcattttggtcccttaactttaaa 2069  T

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Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 1876 - 1914
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1876 cttatttttgaatttcattttggtcccttaactttaaac 1914  T

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Target: scaffold0081; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 2074 - 2036
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  2074 cttaattttgaatttcattttgatcccttaactttaaac 2036  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 28775 - 28813
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28775 cttatttttgaatttcattttggtcccttaactttaaac 28813  T

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Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 28154 - 28191
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28154 cttatttttgaatttcattttggtcccttaactttaaa 28191  T

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Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 28352 - 28315
Alignment:
Q  195 cttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28352 cttatttttgaatttcattttgatcccttaactttaaa 28315  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 47087 - 47129
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaa 232  Q
    |||| |||||||||||||||||||||| |||||||||||||||    
T  47087 cttaacttatttttgaatttcattttgatcccttaactttaaa 47129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 42 - 85
Alignment:
Q  190 cttatcttatttttgaatttcattttggtcccttaactttaaac 233  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  42 cttaacttatttttgaatttcattttgatcccttaattttaaac 85  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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