View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17130_high_14 (Length: 361)
Name: NF17130_high_14
Description: NF17130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17130_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 25 - 340
Target Start/End: Complemental strand, 38080074 - 38079759
Alignment:
| Q |
25 |
catcatcaatcaagaggaatccttggctcgagaactttttccagattattgccccccgttatcctctggtggaggtactggttctatggtcatcaacgat |
124 |
Q |
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| T |
38080074 |
catcatcaatcaagaggaatccttggctcgagaactttttccagattattgccccccgttatcctctggtggaggtactggttctatggtcatcaacgat |
38079975 |
T |
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| Q |
125 |
tgcagtgagtatgatgttgatggggctgacggcgagtcaaactttgatgtggaggaccgaaaacccgagaatcttcatccatccaatcttgggatggata |
224 |
Q |
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| T |
38079974 |
tgcagtgagtatgatgttgatggggctgacggcgagtcaaactttgatgtggaggaccgaaaacccgagaatcttcatccatccaatcttgggatggata |
38079875 |
T |
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| Q |
225 |
gaatgaggggaagctttccagttcagcaaccttctcatcaaatcaagggagaggttgtcacaaacttggatttcattcggaagaggaagatctctaacga |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38079874 |
gaatgaggggaagctttccagttcagcaaccttctcatcaaatcaagggagaggttgtcacaaacttggatttcattcggaagaggaagatctctaacga |
38079775 |
T |
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| Q |
325 |
cttcaacatgatgatg |
340 |
Q |
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|||||||||||||||| |
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| T |
38079774 |
cttcaacatgatgatg |
38079759 |
T |
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