View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17130_high_35 (Length: 321)
Name: NF17130_high_35
Description: NF17130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17130_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 3 - 292
Target Start/End: Original strand, 49007886 - 49008175
Alignment:
| Q |
3 |
gcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagctgttgcgggtgttttcatat |
102 |
Q |
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| T |
49007886 |
gcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagttgttgcgggtgttttcatat |
49007985 |
T |
|
| Q |
103 |
caaatagttctgaggatataacatattacattcaaactaagtttccatctannnnnnngaatccaattaatggagaacttatcaaggatttcattaagtg |
202 |
Q |
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| T |
49007986 |
caaatagttctgaggatataacatattacattcaaactaagtttccatctatttttttgaatccaattaatggagaacttatcaaggatttcattaagtg |
49008085 |
T |
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| Q |
203 |
caatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
292 |
Q |
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| T |
49008086 |
caatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
49008175 |
T |
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