View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17131_high_15 (Length: 371)
Name: NF17131_high_15
Description: NF17131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17131_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 7701888 - 7702141
Alignment:
| Q |
21 |
aataaacacaatttagatttacctccaaaggcaaacaatttctcctttctaagttatctttcgttggagctcggtcatgaatcaatttccataataagtt |
120 |
Q |
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| T |
7701888 |
aataaacacaatttagatttacctccaaaggcaaacaatttctcctttctaagttgtctttcgttggagcacggtcatgaatcaatttccataataagtt |
7701987 |
T |
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| Q |
121 |
ttgattgaaagcataaatagaaaaatgcatacgcgtctatatgagaattgtcccgaaaaatcaccaaaaccaagtactttttagcacaaattttcctcag |
220 |
Q |
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| T |
7701988 |
ttgattgaaagtataaatagaaaaatgcatacgcgtctatatgagaattgtcccgaaaaatccccaaaaccaagtactttttagcacaaattttcctcag |
7702087 |
T |
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| Q |
221 |
aaaaaattaagtatataacacaaccatgaatactcacatcaattagaggtatac |
274 |
Q |
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| T |
7702088 |
aaaaaattaagtatataacacaaccatgaatactcacatcaattagaggtatac |
7702141 |
T |
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