View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17131_low_23 (Length: 288)
Name: NF17131_low_23
Description: NF17131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17131_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 1713516 - 1713773
Alignment:
| Q |
1 |
atacaaagcccgtgtttaaaaatatgtttgaatgagaagctacaacttaattagaagagtactacgctaggaaacctacaacttaatttgaaatattcat |
100 |
Q |
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| T |
1713516 |
atacaaagcccgtgtttagaaatatgtttgaatgagaagctacaacttaattagaagagtactacgctaggaaacctacaacttaatttgaaatattcat |
1713615 |
T |
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| Q |
101 |
ttgtttttacttctaaattattatgatggaaggggcactgtattgttcccaaagcatgtcgatggagtcatatattaacatgggacacatgactattgag |
200 |
Q |
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| T |
1713616 |
ttgtttttacttctaaattattatgatggaaggggcactgtattgttcccaaagcatgtcgatggagtcatatattaacatgggacacatgactattgag |
1713715 |
T |
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| Q |
201 |
acgacgttgcatgaagatatccttgccatctcatgtgaggttggagttgtattattat |
258 |
Q |
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| T |
1713716 |
acgacgttgcatgaagatatccttgccatctcatgtgaggttggagttgtattattat |
1713773 |
T |
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