View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17132_high_8 (Length: 357)
Name: NF17132_high_8
Description: NF17132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17132_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 275
Target Start/End: Original strand, 35446090 - 35446355
Alignment:
| Q |
11 |
aattagattaaatcagtaattttggatttatttttaaaaaacttgccttaattaagataatagaatctgatttatttaattttcaaaattcttgccttaa |
110 |
Q |
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| T |
35446090 |
aattagattaaatcagtaattttggatttatttttaaaaaacttgccttaattaagataatagaatctgatttatttaattttcaaaatacttgccttaa |
35446189 |
T |
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| Q |
111 |
ttaatataatagaatcggattttaataattgttttggt---nnnnnnnnntagaatcagattttatttatttttnnnnnnnncttgccttacaaataatt |
207 |
Q |
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| T |
35446190 |
ttaatataatagaatcggattttaataattgttttggtaaaaaaaaaaaatagaatcagattttatttattttt-aaaaaaacttgccttacaaataatt |
35446288 |
T |
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| Q |
208 |
aaatattaaatatactccttnnnnnnnngttaaatatacaaaaatcgttcctaaataactcaaaatca |
275 |
Q |
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| T |
35446289 |
aaatattaaatatactccttaaaaaaat-ttaaatatacaaaaatcgttcctaattaactcaaaatca |
35446355 |
T |
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