View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17133_high_3 (Length: 503)

Name: NF17133_high_3
Description: NF17133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17133_high_3
NF17133_high_3
[»] chr1 (68 HSPs)
chr1 (69-503)||(52160086-52160519)
chr1 (74-326)||(38868885-38869144)
chr1 (73-228)||(43423721-43423876)
chr1 (73-347)||(2544601-2544876)
chr1 (74-346)||(5338727-5338995)
chr1 (85-346)||(16822020-16822290)
chr1 (87-232)||(46388392-46388537)
chr1 (74-325)||(40416374-40416632)
chr1 (73-346)||(3818856-3819136)
chr1 (161-346)||(6025695-6025887)
chr1 (73-233)||(48431526-48431686)
chr1 (73-287)||(13827639-13827850)
chr1 (212-313)||(40920562-40920663)
chr1 (111-346)||(8796249-8796491)
chr1 (73-233)||(32404646-32404806)
chr1 (74-200)||(14225982-14226108)
chr1 (92-200)||(10569220-10569328)
chr1 (87-193)||(4590687-4590794)
chr1 (107-347)||(38877342-38877589)
chr1 (260-347)||(25715325-25715412)
chr1 (190-309)||(109030-109145)
chr1 (118-232)||(46394867-46394981)
chr1 (74-347)||(35828561-35828829)
chr1 (86-168)||(51812540-51812622)
chr1 (18-56)||(52160544-52160582)
chr1 (86-191)||(12135740-12135845)
chr1 (261-346)||(28090694-28090779)
chr1 (149-233)||(44008657-44008741)
chr1 (271-346)||(4029329-4029404)
chr1 (250-329)||(4590549-4590628)
chr1 (76-139)||(13827931-13827994)
chr1 (142-233)||(33560978-33561069)
chr1 (271-346)||(44751691-44751766)
chr1 (73-139)||(52073676-52073743)
chr1 (147-233)||(50771676-50771762)
chr1 (173-347)||(50806771-50806950)
chr1 (256-329)||(7124333-7124406)
chr1 (261-346)||(10200306-10200391)
chr1 (261-346)||(25979231-25979316)
chr1 (271-347)||(28533674-28533750)
chr1 (171-330)||(42501208-42501374)
chr1 (271-347)||(49347392-49347468)
chr1 (171-227)||(49377424-49377480)
chr1 (271-346)||(1210952-1211027)
chr1 (255-346)||(5113934-5114025)
chr1 (86-137)||(7921850-7921901)
chr1 (271-346)||(29577459-29577534)
chr1 (271-346)||(30202130-30202205)
chr1 (74-233)||(36339923-36340082)
chr1 (271-346)||(41560436-41560511)
chr1 (263-341)||(2545104-2545182)
chr1 (73-139)||(15085936-15086002)
chr1 (233-279)||(17267797-17267843)
chr1 (233-279)||(17275354-17275400)
chr1 (86-132)||(27704025-27704071)
chr1 (244-346)||(30396729-30396831)
chr1 (115-233)||(30834097-30834215)
chr1 (271-329)||(43240396-43240454)
chr1 (261-347)||(52921277-52921363)
chr1 (86-139)||(8343072-8343125)
chr1 (111-168)||(9002392-9002449)
chr1 (86-167)||(17275211-17275292)
chr1 (276-345)||(52561590-52561659)
chr1 (293-329)||(15784982-15785018)
chr1 (261-329)||(22175342-22175410)
chr1 (170-198)||(25460261-25460289)
chr1 (238-346)||(34444530-34444638)
chr1 (250-346)||(35672871-35672967)
[»] chr5 (45 HSPs)
chr5 (73-233)||(15489612-15489772)
chr5 (152-345)||(12576861-12577061)
chr5 (74-299)||(14749310-14749542)
chr5 (92-233)||(6859402-6859543)
chr5 (73-233)||(7359380-7359539)
chr5 (86-233)||(42199301-42199448)
chr5 (74-346)||(43475243-43475521)
chr5 (73-197)||(31636076-31636200)
chr5 (89-233)||(6889011-6889155)
chr5 (87-347)||(43557832-43558093)
chr5 (73-233)||(2712946-2713106)
chr5 (91-198)||(21093772-21093879)
chr5 (73-346)||(14667765-14668053)
chr5 (86-233)||(1525659-1525806)
chr5 (271-346)||(12492384-12492459)
chr5 (108-179)||(26884862-26884933)
chr5 (86-346)||(7678501-7678759)
chr5 (99-233)||(9917570-9917704)
chr5 (73-198)||(18351062-18351188)
chr5 (171-229)||(18698894-18698952)
chr5 (73-139)||(33667218-33667284)
chr5 (161-346)||(38684570-38684762)
chr5 (180-233)||(3775187-3775240)
chr5 (212-328)||(27998582-27998705)
chr5 (73-233)||(79515-79675)
chr5 (90-158)||(4026530-4026598)
chr5 (151-322)||(6788147-6788325)
chr5 (261-329)||(20456970-20457038)
chr5 (275-346)||(408494-408565)
chr5 (73-140)||(11002636-11002703)
chr5 (271-346)||(28976859-28976934)
chr5 (271-346)||(29816589-29816664)
chr5 (87-230)||(30588465-30588606)
chr5 (191-233)||(11753124-11753166)
chr5 (73-139)||(16347592-16347658)
chr5 (73-231)||(28676597-28676755)
chr5 (264-346)||(36123182-36123264)
chr5 (151-233)||(38341545-38341627)
chr5 (73-139)||(38684969-38685035)
chr5 (237-346)||(18350902-18351011)
chr5 (293-346)||(18855836-18855889)
chr5 (293-349)||(3000968-3001024)
chr5 (73-129)||(15168794-15168850)
chr5 (261-329)||(38685164-38685232)
chr5 (96-200)||(41109893-41109997)
[»] chr4 (89 HSPs)
chr4 (73-327)||(54470209-54470470)
chr4 (73-346)||(40018189-40018463)
chr4 (89-346)||(22420717-22420978)
chr4 (77-288)||(42639078-42639296)
chr4 (73-262)||(11389726-11389915)
chr4 (73-233)||(38903838-38904000)
chr4 (87-198)||(21879308-21879419)
chr4 (147-328)||(47372727-47372915)
chr4 (75-220)||(29398822-29398967)
chr4 (151-232)||(55028896-55028977)
chr4 (78-209)||(1380374-1380505)
chr4 (163-233)||(7682030-7682100)
chr4 (233-346)||(25574993-25575106)
chr4 (271-346)||(28236389-28236464)
chr4 (109-329)||(31339574-31339789)
chr4 (114-233)||(31961386-31961505)
chr4 (114-233)||(34233144-34233263)
chr4 (239-346)||(40932924-40933031)
chr4 (87-158)||(44860862-44860933)
chr4 (93-199)||(12725023-12725129)
chr4 (86-232)||(26356634-26356780)
chr4 (73-179)||(28497492-28497597)
chr4 (244-346)||(44719361-44719463)
chr4 (108-233)||(13805385-13805510)
chr4 (73-233)||(31897548-31897706)
chr4 (233-345)||(26024851-26024963)
chr4 (173-233)||(30853445-30853505)
chr4 (73-197)||(33709926-33710050)
chr4 (263-347)||(49686892-49686976)
chr4 (239-347)||(49738549-49738657)
chr4 (244-346)||(2557671-2557774)
chr4 (76-139)||(46715586-46715649)
chr4 (271-346)||(56375497-56375572)
chr4 (111-233)||(17666163-17666285)
chr4 (233-347)||(31403033-31403147)
chr4 (233-343)||(37042667-37042777)
chr4 (74-132)||(42293470-42293528)
chr4 (73-139)||(51252675-51252741)
chr4 (273-346)||(21528497-21528570)
chr4 (239-288)||(32339734-32339783)
chr4 (97-233)||(8459155-8459291)
chr4 (73-145)||(28236185-28236257)
chr4 (73-233)||(35555767-35555927)
chr4 (73-141)||(37797854-37797922)
chr4 (86-166)||(45185214-45185294)
chr4 (181-233)||(49987518-49987570)
chr4 (86-198)||(50471541-50471653)
chr4 (177-233)||(53517636-53517692)
chr4 (244-344)||(55388213-55388313)
chr4 (109-233)||(55579070-55579194)
chr4 (233-288)||(6843784-6843839)
chr4 (108-233)||(21107025-21107154)
chr4 (244-347)||(29209174-29209277)
chr4 (271-346)||(31959814-31959889)
chr4 (271-346)||(35690478-35690553)
chr4 (76-139)||(38570961-38571024)
chr4 (73-156)||(41192838-41192921)
chr4 (73-132)||(44047569-44047628)
chr4 (271-346)||(45209205-45209280)
chr4 (271-346)||(52569515-52569590)
chr4 (86-196)||(4136886-4136995)
chr4 (151-233)||(21945758-21945840)
chr4 (73-151)||(30621406-30621484)
chr4 (73-139)||(31459032-31459098)
chr4 (171-233)||(44860933-44860995)
chr4 (108-158)||(45176043-45176093)
chr4 (264-346)||(50967028-50967110)
chr4 (73-218)||(55768635-55768781)
chr4 (73-218)||(55832891-55833037)
chr4 (89-198)||(2589008-2589117)
chr4 (109-158)||(21214775-21214824)
chr4 (241-346)||(29398981-29399086)
chr4 (87-132)||(45094381-45094426)
chr4 (261-346)||(47265195-47265280)
chr4 (86-139)||(47611742-47611795)
chr4 (250-347)||(48622542-48622639)
chr4 (73-122)||(49738835-49738884)
chr4 (233-346)||(55007915-55008028)
chr4 (271-347)||(23906296-23906372)
chr4 (305-349)||(28764371-28764415)
chr4 (87-139)||(30853373-30853425)
chr4 (294-346)||(31961266-31961318)
chr4 (86-198)||(42285856-42285967)
chr4 (73-233)||(46372026-46372186)
chr4 (161-233)||(48033175-48033247)
chr4 (86-130)||(49987443-49987487)
chr4 (86-145)||(50662402-50662462)
chr4 (141-233)||(51009231-51009323)
chr4 (235-299)||(55028992-55029056)
[»] chr8 (59 HSPs)
chr8 (116-347)||(29520695-29520932)
chr8 (121-288)||(37826341-37826511)
chr8 (73-233)||(45512615-45512775)
chr8 (73-200)||(9695633-9695760)
chr8 (86-280)||(16917199-16917399)
chr8 (73-234)||(29700278-29700439)
chr8 (109-314)||(43904697-43904909)
chr8 (212-347)||(12611642-12611780)
chr8 (86-280)||(10079973-10080173)
chr8 (109-326)||(32930999-32931222)
chr8 (147-346)||(30198266-30198472)
chr8 (142-233)||(38178380-38178471)
chr8 (86-221)||(41971910-41972045)
chr8 (244-346)||(23492214-23492316)
chr8 (108-233)||(30559730-30559855)
chr8 (129-233)||(5908704-5908808)
chr8 (73-209)||(7046336-7046471)
chr8 (171-290)||(10108911-10109039)
chr8 (86-233)||(30748472-30748619)
chr8 (73-132)||(41444547-41444606)
chr8 (73-139)||(2776443-2776509)
chr8 (273-342)||(39702163-39702232)
chr8 (250-347)||(45419421-45419518)
chr8 (73-233)||(32043592-32043752)
chr8 (108-158)||(9905076-9905126)
chr8 (147-233)||(24739968-24740054)
chr8 (86-346)||(30783042-30783301)
chr8 (171-233)||(35914721-35914783)
chr8 (86-211)||(6483272-6483397)
chr8 (74-122)||(12611538-12611586)
chr8 (170-233)||(4011182-4011245)
chr8 (271-346)||(11523723-11523798)
chr8 (233-288)||(27037804-27037859)
chr8 (271-346)||(32569710-32569785)
chr8 (86-145)||(38689553-38689612)
chr8 (89-200)||(39051160-39051271)
chr8 (175-233)||(79131-79189)
chr8 (73-155)||(2518590-2518672)
chr8 (129-199)||(9969276-9969346)
chr8 (244-346)||(30748643-30748745)
chr8 (261-347)||(35914600-35914686)
chr8 (73-139)||(39946859-39946925)
chr8 (74-208)||(44373779-44373913)
chr8 (261-346)||(490532-490617)
chr8 (273-346)||(14742082-14742155)
chr8 (150-231)||(16971876-16971957)
chr8 (74-139)||(18474174-18474239)
chr8 (86-139)||(35643815-35643868)
chr8 (293-346)||(41031420-41031473)
chr8 (293-346)||(41031526-41031579)
chr8 (108-225)||(42584408-42584525)
chr8 (274-346)||(1928587-1928659)
chr8 (72-124)||(9999281-9999333)
chr8 (250-346)||(25473403-25473499)
chr8 (242-286)||(31104578-31104622)
chr8 (174-230)||(35643729-35643785)
chr8 (294-346)||(39953264-39953316)
chr8 (86-194)||(43732571-43732678)
chr8 (271-347)||(44529432-44529508)
[»] chr7 (59 HSPs)
chr7 (74-329)||(28627950-28628212)
chr7 (73-233)||(47848676-47848836)
chr7 (89-326)||(38135233-38135476)
chr7 (73-197)||(1740803-1740927)
chr7 (73-200)||(19262587-19262713)
chr7 (73-180)||(28020966-28021073)
chr7 (88-222)||(25579208-25579342)
chr7 (233-346)||(41483656-41483769)
chr7 (89-197)||(30144793-30144901)
chr7 (96-233)||(6420610-6420747)
chr7 (74-233)||(12966025-12966178)
chr7 (76-198)||(39811962-39812084)
chr7 (88-346)||(40008431-40008682)
chr7 (233-347)||(40138947-40139061)
chr7 (73-222)||(26742027-26742176)
chr7 (73-198)||(36514362-36514487)
chr7 (95-228)||(48202827-48202960)
chr7 (89-197)||(35713713-35713821)
chr7 (271-346)||(21078124-21078199)
chr7 (73-233)||(43282410-43282571)
chr7 (73-198)||(5335922-5336047)
chr7 (108-195)||(9797862-9797949)
chr7 (271-346)||(37618152-37618227)
chr7 (73-132)||(38920796-38920855)
chr7 (73-139)||(27021906-27021972)
chr7 (73-197)||(27893707-27893828)
chr7 (171-233)||(36245524-36245586)
chr7 (233-343)||(45601645-45601755)
chr7 (261-346)||(2885722-2885807)
chr7 (261-346)||(24598188-24598272)
chr7 (261-346)||(28208328-28208413)
chr7 (173-233)||(30814791-30814851)
chr7 (87-139)||(41948532-41948584)
chr7 (271-346)||(11594167-11594242)
chr7 (271-346)||(12841275-12841350)
chr7 (73-279)||(30200031-30200243)
chr7 (271-346)||(31682602-31682677)
chr7 (271-346)||(39906372-39906447)
chr7 (73-132)||(40169651-40169710)
chr7 (73-168)||(42187472-42187567)
chr7 (77-139)||(7220750-7220812)
chr7 (111-157)||(23087300-23087346)
chr7 (77-313)||(28858050-28858294)
chr7 (73-177)||(30632970-30633071)
chr7 (261-347)||(40979927-40980013)
chr7 (73-139)||(43281676-43281742)
chr7 (73-139)||(45836694-45836760)
chr7 (269-346)||(22349825-22349902)
chr7 (172-229)||(32368461-32368518)
chr7 (73-218)||(36101900-36102045)
chr7 (261-346)||(43491505-43491590)
chr7 (261-346)||(45836482-45836567)
chr7 (274-346)||(1011256-1011328)
chr7 (271-343)||(6375075-6375147)
chr7 (91-139)||(24549907-24549955)
chr7 (250-346)||(29650570-29650666)
chr7 (271-347)||(34869627-34869703)
chr7 (73-233)||(36136766-36136926)
chr7 (86-158)||(40139114-40139186)
[»] chr2 (67 HSPs)
chr2 (99-329)||(26784357-26784594)
chr2 (90-345)||(37481618-37481880)
chr2 (73-220)||(1456232-1456379)
chr2 (94-270)||(12026081-12026264)
chr2 (73-233)||(43752067-43752227)
chr2 (244-346)||(8197541-8197643)
chr2 (244-346)||(8202301-8202403)
chr2 (73-230)||(23714384-23714541)
chr2 (73-230)||(24102056-24102213)
chr2 (73-233)||(12141546-12141706)
chr2 (161-342)||(33504313-33504502)
chr2 (73-346)||(38434953-38435234)
chr2 (87-233)||(42092533-42092679)
chr2 (73-233)||(18958909-18959073)
chr2 (112-234)||(36869900-36870021)
chr2 (86-346)||(9556369-9556635)
chr2 (91-186)||(3481161-3481256)
chr2 (151-233)||(19235104-19235186)
chr2 (73-158)||(4598757-4598842)
chr2 (73-190)||(11017316-11017433)
chr2 (87-168)||(13240930-13241011)
chr2 (86-223)||(14197288-14197430)
chr2 (134-290)||(37470189-37470352)
chr2 (86-139)||(41858746-41858799)
chr2 (108-196)||(43260441-43260529)
chr2 (73-346)||(11412723-11412992)
chr2 (256-347)||(19855654-19855745)
chr2 (110-168)||(9578888-9578946)
chr2 (107-229)||(26850271-26850393)
chr2 (88-168)||(3305965-3306046)
chr2 (73-158)||(6218969-6219054)
chr2 (86-187)||(9647775-9647876)
chr2 (87-156)||(18188796-18188865)
chr2 (261-346)||(36183648-36183733)
chr2 (271-347)||(12474926-12475002)
chr2 (161-233)||(38860268-38860340)
chr2 (113-193)||(45077797-45077877)
chr2 (271-346)||(227396-227471)
chr2 (239-346)||(7431889-7431996)
chr2 (111-154)||(9578698-9578741)
chr2 (264-347)||(10516748-10516831)
chr2 (271-346)||(28508885-28508960)
chr2 (271-346)||(30306239-30306314)
chr2 (110-233)||(42543274-42543397)
chr2 (86-233)||(44437841-44437988)
chr2 (111-233)||(13592418-13592540)
chr2 (73-195)||(14255592-14255713)
chr2 (73-139)||(25834683-25834749)
chr2 (233-299)||(32402669-32402735)
chr2 (293-347)||(35704215-35704269)
chr2 (280-346)||(36819392-36819457)
chr2 (241-346)||(3481331-3481436)
chr2 (273-346)||(3635323-3635396)
chr2 (261-346)||(9531600-9531685)
chr2 (261-346)||(12734897-12734982)
chr2 (180-233)||(18188861-18188914)
chr2 (261-346)||(25834875-25834960)
chr2 (86-139)||(41779522-41779575)
chr2 (261-346)||(43573130-43573215)
chr2 (261-346)||(45367625-45367710)
chr2 (274-346)||(4807805-4807877)
chr2 (261-329)||(13443925-13443993)
chr2 (262-346)||(19863432-19863516)
chr2 (262-346)||(19867764-19867848)
chr2 (262-346)||(19872665-19872749)
chr2 (294-346)||(32395599-32395651)
chr2 (271-347)||(38452685-38452761)
[»] chr3 (61 HSPs)
chr3 (88-233)||(31261062-31261206)
chr3 (78-232)||(44443325-44443479)
chr3 (75-231)||(42510138-42510292)
chr3 (87-231)||(659541-659685)
chr3 (87-233)||(11581460-11581606)
chr3 (73-233)||(21200552-21200710)
chr3 (86-347)||(42026535-42026803)
chr3 (73-344)||(37598171-37598449)
chr3 (86-184)||(45289260-45289358)
chr3 (73-194)||(41842670-41842791)
chr3 (86-329)||(46431696-46431940)
chr3 (271-329)||(17022689-17022747)
chr3 (73-233)||(38430850-38431010)
chr3 (74-233)||(37227931-37228090)
chr3 (73-139)||(26490317-26490383)
chr3 (87-233)||(39235154-39235300)
chr3 (86-144)||(44134039-44134097)
chr3 (73-233)||(39600801-39600961)
chr3 (263-346)||(39535401-39535483)
chr3 (273-347)||(31566160-31566234)
chr3 (73-139)||(49503768-49503834)
chr3 (73-139)||(50960847-50960913)
chr3 (175-299)||(55244381-55244513)
chr3 (256-329)||(21862758-21862831)
chr3 (73-154)||(27917572-27917653)
chr3 (246-287)||(30723871-30723912)
chr3 (116-233)||(33755462-33755579)
chr3 (86-139)||(39535654-39535707)
chr3 (73-233)||(43308564-43308724)
chr3 (73-233)||(54128380-54128541)
chr3 (92-232)||(7278481-7278620)
chr3 (263-347)||(7278663-7278747)
chr3 (88-196)||(29374951-29375059)
chr3 (173-288)||(37228184-37228306)
chr3 (86-218)||(46140447-46140579)
chr3 (181-233)||(46146206-46146258)
chr3 (269-329)||(53951960-53952020)
chr3 (271-346)||(12096705-12096780)
chr3 (76-179)||(19737002-19737105)
chr3 (76-179)||(19757905-19758008)
chr3 (73-168)||(34719257-34719352)
chr3 (256-343)||(45493695-45493782)
chr3 (271-346)||(51447717-51447792)
chr3 (174-233)||(53998758-53998817)
chr3 (261-347)||(15296104-15296190)
chr3 (273-347)||(24778608-24778682)
chr3 (293-347)||(35033375-35033429)
chr3 (73-139)||(36820175-36820241)
chr3 (273-347)||(47233595-47233669)
chr3 (73-139)||(47233810-47233876)
chr3 (273-346)||(22281-22354)
chr3 (273-346)||(311309-311382)
chr3 (107-196)||(2968247-2968336)
chr3 (273-346)||(5169041-5169114)
chr3 (273-346)||(31454225-31454298)
chr3 (180-233)||(40982005-40982058)
chr3 (261-346)||(48508432-48508517)
chr3 (215-286)||(11284136-11284210)
chr3 (181-233)||(40116588-40116640)
chr3 (239-287)||(40176428-40176476)
chr3 (262-346)||(45486849-45486933)
[»] chr6 (35 HSPs)
chr6 (73-329)||(21870083-21870353)
chr6 (94-299)||(33997591-33997801)
chr6 (86-346)||(9593710-9593973)
chr6 (97-198)||(32913417-32913518)
chr6 (73-197)||(14389324-14389447)
chr6 (188-346)||(34505-34670)
chr6 (271-347)||(1615222-1615298)
chr6 (73-193)||(2079342-2079462)
chr6 (86-233)||(24665825-24665973)
chr6 (80-222)||(9749355-9749497)
chr6 (87-168)||(43237-43318)
chr6 (254-346)||(586040-586132)
chr6 (108-208)||(6906972-6907072)
chr6 (271-346)||(28085583-28085658)
chr6 (170-232)||(1747762-1747824)
chr6 (161-326)||(8364646-8364818)
chr6 (244-322)||(32945428-32945506)
chr6 (115-158)||(32515525-32515568)
chr6 (85-123)||(4948541-4948579)
chr6 (85-123)||(4955512-4955550)
chr6 (73-139)||(5258362-5258428)
chr6 (239-329)||(6293409-6293499)
chr6 (173-231)||(10617356-10617414)
chr6 (261-343)||(30031453-30031535)
chr6 (73-139)||(33084060-33084126)
chr6 (261-346)||(12890772-12890857)
chr6 (261-346)||(14030992-14031077)
chr6 (258-311)||(22993608-22993661)
chr6 (258-311)||(23794737-23794790)
chr6 (250-346)||(34939285-34939382)
chr6 (273-345)||(608370-608442)
chr6 (274-346)||(4334972-4335044)
chr6 (118-198)||(5897524-5897604)
chr6 (90-198)||(6293541-6293649)
chr6 (271-347)||(34934829-34934905)
[»] scaffold0325 (1 HSPs)
scaffold0325 (75-233)||(11802-11959)
[»] scaffold0018 (1 HSPs)
scaffold0018 (73-198)||(44023-44148)
[»] scaffold0187 (1 HSPs)
scaffold0187 (243-289)||(2942-2988)
[»] scaffold0570 (1 HSPs)
scaffold0570 (271-346)||(948-1023)
[»] scaffold0373 (1 HSPs)
scaffold0373 (233-288)||(2359-2414)
[»] scaffold0168 (1 HSPs)
scaffold0168 (271-346)||(28889-28964)
[»] scaffold0024 (1 HSPs)
scaffold0024 (261-349)||(82915-83003)
[»] scaffold0006 (1 HSPs)
scaffold0006 (294-346)||(163194-163246)


Alignment Details
Target: chr1 (Bit Score: 366; Significance: 0; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 69 - 503
Target Start/End: Complemental strand, 52160519 - 52160086
Alignment:
Q  69 tagtggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52160519 tagtggtagcacctagcatagaaaa-atggtggaaacccggcttaggtggtttggacatgtagatagaaaatttgtaaattttgtagtaacaagagtaga 52160421  T
Q  169 ctagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52160420 ctagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatctagaaattaacgagtttgatagaaatatga 52160321  T
Q  269 tatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgtactcgtgatgctttgatgacat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52160320 tatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgtactcgtgatgctttgatgacat 52160221  T
Q  369 tatttcataaataatcaaaatggggtttagatactactacatattgctggtcaatgttccaattttactcttcaaaataagcaacnnnnnnnnnnngggt 468  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||           ||||    
T  52160220 tatttcataaataatcgaaatggggtttagatactactacatatttctggtcaatgttccaattttactcttcaaaataagtaactttttttttttgggt 52160121  T
Q  469 gcaatcttcatatataaagtttgcattttctccat 503  Q
    ||||||||||||||||||||||||||||| |||||    
T  52160120 gcaatcttcatatataaagtttgcattttgtccat 52160086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 326
Target Start/End: Original strand, 38868885 - 38869144
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    |||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||| |||| | | ||| ||| | |||  |  |||||||| ||||    
T  38868885 gtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaacactagtagattctctagcgaggagagtagattaga 38868984  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    |||||||||||||||||| |||||||| | ||||||  ||||||||||||||||||| |       ||||| |||  ||||| | ||| |||||| ||||    
T  38868985 tggagggtagtcaaatcattagaggcagaagaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagatatat 38869084  T
Q  267 gatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtggga 326  Q
    | |||||||||||| ||||||| | | |||||| ||| ||||||||| || |||||||||    
T  38869085 ggtatatgatagaacattatggcgtcgtttgatccatgtagccgaccccacttagtggga 38869144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 43423721 - 43423876
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  ||||||||||||||||||||  |||||||||||||||| |||||||| |||||| ||||| ||| ||||||||  ||||||||||||    
T  43423721 ggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagtaagtagagtagactag 43423820  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagaga 228  Q
    |||||  ||||||||||||||||||| | | ||||||  ||||||| || ||||||    
T  43423821 atggatagtagtcaaatcactagaggtagaggaagacctagaaaaattacaagaga 43423876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 347
Target Start/End: Original strand, 2544601 - 2544876
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||||||||||| | | ||||||||||||||||||||||| ||||||  | || ||| | ||||||  ||||||||  ||    
T  2544601 ggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctatagtaaggagagtagatcag 2544700  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaac--taagatatagaaattaacgagtttgatagaaatatgata 270  Q
    ||||||| |||||||| ||||||||| | | ||||||  ||||||||||| ||||||||  |||||| | ||||| || ||||| ||  |||||||| |     
T  2544701 atggaggatagtcaaa-cactagaggtagaggaagacctagaaaaactatcagagaaactataagatttggaaatcaatgagttggagcgaaatatggtt 2544799  T
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||| |||||| |||||||    ||||||| ||| ||||||||| || ||||||| | ||  | ||||||||||||||    
T  2544800 tataatagaacattatggcataatttgatccatgtagccgaccccacttagtggtaaaaggcttggttgttgttgta 2544876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 74 - 346
Target Start/End: Original strand, 5338727 - 5338995
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  ||||||||||||||||||||   ||||||||||||||| |||| ||| ||||||  |||| ||  | ||||||  ||||||||  |||    
T  5338727 gtagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcaga 5338826  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatat 273  Q
    |||||| || ||| ||||||||||||| | | ||||  |||||||||||||||||    ||||| |||| ||||| ||||| ||| ||||| |||| |||    
T  5338827 tggaggatattcagatcactagaggcagaagtagacctagaaaaactataagaga----aagatctagagattaatgagttggatcgaaatgtgatttat 5338922  T
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
     |||||| ||||||| |  ||||||| ||| ||||| |||||| |||||| |||||  |  ||||||||||||    
T  5338923 tatagaacattatggcgtaatttgatccatgtagccaacctcacttagtgagataaggctcggttgttgttgt 5338995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 85 - 346
Target Start/End: Complemental strand, 16822290 - 16822020
Alignment:
Q  85 cgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagt 184  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||  |||| | ||||||||||  ||||  |||||||||||| |||||    
T  16822290 cgtagacaagatggtagaaactcggcttaggtggtttggacatgtagagagaagacctgtataatttgtagtaaggagagatgactagatggagagtagt 16822191  T
Q  185 caaatcactagaggcatatgaagac--agagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatga 275  Q
    ||||| |||||||||| | ||| ||  | | |||||||| ||||||||||       ||||| |||| ||||| ||| | |||||  |||||||||||||    
T  16822190 caaattactagaggcaaaggaaaacgtaaaaaaaaactacaagagaaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatga 16822091  T
Q  276 tagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgt-ggttgttgttgt 346  Q
    | ||| ||||||| | | |||| | ||| ||| ||||| || ||||||||||||||| | ||||||||||||    
T  16822090 ttgaacattatggcggc-tttggtccatgtagtcgaccccacttagtgggataaaacttgggttgttgttgt 16822020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 46388392 - 46388537
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||| |||||| ||||| ||| ||||||||  |||||||   || ||||||||||| |    
T  46388392 tagaaaagatggtggaaactcggcttaggtagtttgcacatgtagagagaagacttgtagattctgtagtaaggagagtagctcagttggagggtagtta 46388491  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    ||||| || || ||||||||| |  |||||||||||||||||||||    
T  46388492 aatcattatagacatatgaaggcctagaaaaactataagagaaact 46388537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 325
Target Start/End: Original strand, 40416374 - 40416632
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  ||||||||||||||||||||  |||||||||||||| | |||||||| ||||||  |||| ||||||||||||  ||||||||  |||    
T  40416374 gtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatcaga 40416473  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    || ||| |||||| ||||| | || || | ||||||  ||||||||||||||| |||||       ||||| || | ||||| ||||| ||| |||||||    
T  40416474 tgcaggatagtcagatcaccaaagacagaagaagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttggatcgaaatat 40416573  T
Q  267 gatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtggg 325  Q
    | | |||||||||| |||||||||  || |||| | | ||||||||| || ||||||||    
T  40416574 ggtttatgatagaacattatggtgtaatgtgatccctttagccgaccccacttagtggg 40416632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 346
Target Start/End: Complemental strand, 3819136 - 3818856
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||||| |||  | |||| ||||||||| |||||||| |||||| ||||  ||| | ||||||  ||||||||  ||    
T  3819136 ggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatcag 3819037  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaata 265  Q
    |||||||||| ||||| ||||||||  | | ||||||   ||||||||||||||||||||       ||||| |||| ||||| |||||  |||||||||    
T  3819036 atggagggtaatcaaaccactagagaaagaggaagaccttgaaaaactataagagaaactattaagaaagatttagagattaatgagttgaatagaaata 3818937  T
Q  266 tgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    || | |||||| ||| ||||||  | |||||||| ||| ||||||||  || ||||||||||||  | |||| ||||||||    
T  3818936 tggtttatgatggaacattatgtcgccatttgatccatgtagccgactgcacttagtgggataaggcttggtcgttgttgt 3818856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 161 - 346
Target Start/End: Original strand, 6025695 - 6025887
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagt 253  Q
    ||||||||  ||||| |||||||||||||||||||||||| | ||||||  ||||||||||||||||| |||       ||||| |||| ||||| ||||    
T  6025695 agagtagatcagatgtagggtagtcaaatcactagaggcagaggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagt 6025794  T
Q  254 ttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    | |||||||||||| ||| |||||||| || |||| | |||||||| ||| |||||||   || |||||||||||| || |||||||| ||||    
T  6025795 tggatagaaatatggtatctgatagaacatgatggcgtcatttgatccatgtagccgattccacttagtgggataatacttggttgtttttgt 6025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 48431686 - 48431526
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||| ||||  |||||||||||||||||||   |||||||||||||||| |||||||| |||||| ||||| ||||||||||||  ||||| ||  ||    
T  48431686 ggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcag 48431587  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||  || || ||||| | | ||||||  | ||||||||||||||||||||    
T  48431586 atggaggatagtcggattacaagaggtagaggaagacccaaaaaaactataagagaaacta 48431526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 73 - 287
Target Start/End: Complemental strand, 13827850 - 13827639
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||| |||||  |||||||||| |||||||||  || | |||||||||||||||||||| ||||||  |||| ||| ||||||||  ||||||||  |     
T  13827850 ggtagtacctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcat 13827751  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatata 272  Q
    |||||   |||||| ||||||||||||| | ||||||  ||||||||||| | |||||  ||  | |||| ||||| ||||| |||||||||||| ||||    
T  13827750 atggaacatagtcagatcactagaggcagaggaagacctagaaaaactatta-agaaa--aaagtctagagattaatgagttggatagaaatatggtata 13827654  T
Q  273 tgatagaatattatg 287  Q
    |||||||| ||||||    
T  13827653 tgatagaacattatg 13827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 40920663 - 40920562
Alignment:
Q  212 agaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccga 311  Q
    |||||||||||||| |||| |||||| |||| ||||| ||||| |||||||||||| |||||||||||||||||||||| | |||||| ||| ||| |||    
T  40920663 agaaaaactataagtgaaaataagatctagagattaatgagttggatagaaatatggtatatgatagaatattatggtgtcttttgattcatgtagtcga 40920564  T
Q  312 cc 313  Q
    ||    
T  40920563 cc 40920562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 346
Target Start/End: Original strand, 8796249 - 8796491
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagaca 210  Q
    |||||||||||||||||||||| | ||||  ||||  ||| |||||||  |||||| |   |||||||| |||||| ||||||||||||| | ||||||     
T  8796249 ttaggtggtttggacatgtagagataagacatgtaggtttcgtagtaaggagagtaaatcggatggaggatagtcagatcactagaggcagaggaagacc 8796348  T
Q  211 gagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcat 303  Q
     | ||||||| |||||||||||       ||||| |||| ||||| || || ||| |||||||| | |||||||||| ||||||| |  |||| || |||    
T  8796349 aataaaaactttaagagaaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccat 8796448  T
Q  304 atagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
     ||||||||| || ||||||||||||  | |||||||||||||    
T  8796449 gtagccgaccccacttagtgggataaggcttggttgttgttgt 8796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 32404806 - 32404646
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  ||| |||||||||||||||   ||||||||||||||||| ||||||| ||||||  |||| ||| | ||||||  ||||||||  ||    
T  32404806 ggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagtagagaag 32404707  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||| ||||| ||||| | | ||||||  | ||||||||||||||||||||    
T  32404706 atggaggatagtcatatcacaagaggtagaggaagacctacaaaaactataagagaaacta 32404646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 14226108 - 14225982
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    |||||||||| | ||||||||||||||||||   |||||||||||||||| |||||||| || |    |||| ||||||||||||  ||||||||  | |    
T  14226108 gtagcacctatcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcaca 14226009  T
Q  174 tggagggtagtcaaatcactagaggca 200  Q
    ||||| |||||||||||||||||||||    
T  14226008 tggagcgtagtcaaatcactagaggca 14225982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 10569328 - 10569220
Alignment:
Q  92 aagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatca 191  Q
    ||||||||| ||||  |||||||||||||||| |||||||| ||||||  |||| ||| |||||||   || ||||| ||||||||||||| ||||||||    
T  10569328 aagatggtgaaaacttggcttaggtggtttgggcatgtagagagaagacctgtagattctgtagtacggagggtagattagatggagggtaatcaaatca 10569229  T
Q  192 ctagaggca 200  Q
    |||||||||    
T  10569228 ctagaggca 10569220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 4590794 - 4590687
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtgg-tttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||||||| |  |||||| || ||||| |||| ||| ||||||| |||| ||||||||||||  |||||||| |||||||||||||||     
T  4590794 tagaaaagatggtggaaactcatcttaggggggtttgggcatgcagagagaagatctgtagattttgtagtaaagagagtagattagatggagggtagtt 4590695  T
Q  186 aaatcact 193  Q
    ||||||||    
T  4590694 aaatcact 4590687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 347
Target Start/End: Complemental strand, 38877589 - 38877342
Alignment:
Q  107 cggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaa 206  Q
    |||||||||||||||   |||||||| ||| ||  |||| |||||| || ||  || ||||||||||||||| ||||||||||||||| ||||| | |||    
T  38877589 cggcttaggtggtttaagcatgtagagagatgacctgtagattttgcagcaaggagggtagactagatggagtgtagtcaaatcactataggcagaggaa 38877490  T
Q  207 gacagagaaaaactataagaga-------aactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgat 299  Q
    |||  || ||||||| ||| ||       || |||||| || | ||||||||||| |||||  ||||  |||| ||||||| ||||||| | ||||||||    
T  38877489 gacctaggaaaactacaagggaaagtatcaagtaagatctaaagattaacgagttggatagggatatagtatacgatagaacattatggcgtcatttgat 38877390  T
Q  300 gcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
     ||| ||||||| | || ||||||||||||  | ||||||| ||||||    
T  38877389 ccatgtagccgaacccacttagtgggataaggcttggttgtggttgta 38877342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 25715412 - 25715325
Alignment:
Q  260 gaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||| | |||||||||||||||||| |  ||||||| ||| |||||||||||| ||||||||||||  | ||||||||||||||    
T  25715412 gaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgta 25715325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 309
Target Start/End: Complemental strand, 109145 - 109030
Alignment:
Q  190 cactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggt 289  Q
    |||||||| |||||| ||||  |||||||||||||||||    |||||||||| ||||| ||||| |||| | ||||||| |||||||||| |||||||     
T  109145 cactagagacatatgtagacctagaaaaactataagaga----aagatatagacattaatgagttggataaatatatgatgtatgatagaacattatggc 109050  T
Q  290 gacatttgatgcatatagcc 309  Q
    | |||||||| ||| |||||    
T  109049 gtcatttgatccatgtagcc 109030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 46394867 - 46394981
Alignment:
Q  118 gtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaa 217  Q
    ||||| ||||||||| |||||| ||||| ||| ||||||||  |||||||   || ||||||||||| |||||| || || ||||||||| |  ||||||    
T  46394867 gtttgcacatgtagagagaagacttgtagattctgtagtaaggagagtagctcagttggagggtagttaaatcattatagacatatgaaggcctagaaaa 46394966  T
Q  218 actataagagaaact 232  Q
    |||||||||||||||    
T  46394967 actataagagaaact 46394981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 347
Target Start/End: Complemental strand, 35828829 - 35828561
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  |||||||||||||||||||   || ||||||||||||||| |||||| ||||||  | || ||| ||||||||  |||| |||  | |    
T  35828829 gtagcacctatggtagaaaagatggtggaaaatagggttaggtggtttggacgtgtagagagaagacctatagattatgtagtaaggagagaagatcata 35828730  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatat 273  Q
    |||||| |||||| ||| ||||||||| | |||||    |||||||||| || ||    ||||| |   |||||| ||||| ||| |||||||| | ||     
T  35828729 tggaggatagtcagatccctagaggcagaggaagatctggaaaaactattag-ga----aagatttgataattaatgagttggatggaaatatggtttac 35828635  T
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| |||||||  | ||||||| ||| || |||||| |  ||||||||| || || ||||||||||||||    
T  35828634 gatagaacattatggcaatatttgatccatgtaaccgaccccgcttagtgggaaaagacttggttgttgttgta 35828561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 51812540 - 51812622
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||||||||||||||||  |||||| ||| ||||| |||||||| |||| | ||||| |||||||||||| || ||||||    
T  51812540 gtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaaaaattgtagattttgtagtaagaaaagtaga 51812622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 52160582 - 52160544
Alignment:
Q  18 aactagactatatgtgataaggttaacaaggagaacatt 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52160582 aactagactatatgtgataaggttaacaaggagaacatt 52160544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 12135740 - 12135845
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||| ||||  |||||||||  |||||||||||||||| | ||   || |||| ||||||||  |||||||| ||||| ||| ||||||    
T  12135740 gtagaaaagatggtgtaaacgaggcttaggtattttggacatgtagataaatgaaaagtgaattctgtagtaagtagagtagattagatagagagtagtc 12135839  T
Q  186 aaatca 191  Q
    ||||||    
T  12135840 aaatca 12135845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 28090779 - 28090694
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| ||||||| |  ||||||| ||| ||||||||| || |||||||||||| || |||||||||||||    
T  28090779 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 28090694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 44008657 - 44008741
Alignment:
Q  149 tttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||  ||||||||| || || | ||||||||||||||||||||||| | ||||||  ||||||| | ||||||||||||    
T  44008657 tttgtagtatgaagagtagattaaatagcgggtagtcaaatcactagaggcagaggaagacctagaaaaaatctaagagaaacta 44008741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 4029329 - 4029404
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| || | ||||| |||||||||| ||| ||||||||| || |||||||||||| || |||||||||||||    
T  4029329 tatgatataacactatggcgacatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 4029404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 329
Target Start/End: Complemental strand, 4590628 - 4590549
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||| |||||| ||||||||| |||||||| | |||||||  ||||||| ||| ||||||||| || ||||||||||||    
T  4590628 gagttggatagatatatgatatgtgatagaacaatatggtgtaatttgatccatgtagccgaccccacttagtgggataa 4590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 13827994 - 13827931
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||  ||||||||||||||||||||  || |||||||||||| ||||||||| ||||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagagaaga 13827931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 33561069 - 33560978
Alignment:
Q  142 tgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||| ||| ||||||||  ||||||||   ||||||||||||||||||||||||||||| | |||| |  ||||||||| |||| |||||||    
T  33561069 tgtagattctgtagtaaggagagtagatatgatggagggtagtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaacta 33560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 44751691 - 44751766
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| |||||||||||| ||||||||||||  | |||||||||||||    
T  44751691 tatgatagaacactatggcgtcatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgt 44751766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 52073743 - 52073676
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacc-cggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||    
T  52073743 ggtagcacctattgtagaaaagatggtaaaaaactcggcttaggtggtttggacatgtagagagaaga 52073676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 50771762 - 50771676
Alignment:
Q  147 attttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||||||  ||||||||  |||||||||| |||||||| |||||||| |   ||||||  |||||||||||||| |||||||    
T  50771762 attttgtagtaaggagagtagatcagatggaggggagtcaaatgactagaggtaggggaagacctagaaaaactataagcgaaacta 50771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 347
Target Start/End: Original strand, 50806771 - 50806950
Alignment:
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact---aaga--tatagaaattaacgagtttgatagaaatatg 267  Q
    |||||||| ||||||||||||||| | | ||||||||  |||||||| ||||||||||||   ||||   ||||| ||||| | ||| |||| |||||||    
T  50806771 atggaggggagtcaaatcactagaagtagatgaagacctagaaaaacaataagagaaactatcaagaaggatagagattaatgcgttggataaaaatatg 50806870  T
Q  268 atatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
     | ||||||| || | ||||| |   |||||| ||| || |||||| |||||||||| ||||  | ||||||||||||||    
T  50806871 gtttatgataaaacactatggcgttgtttgattcatgtaaccgaccccatttagtggaataaggcttggttgttgttgta 50806950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 7124333 - 7124406
Alignment:
Q  256 gatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    |||||||||||| |||| ||||||  ||||||||| | |||||| ||| |||| ||||||| ||||||||||||    
T  7124333 gatagaaatatggtataggatagagcattatggtgtcgtttgatccatgtagctgacctcacttagtgggataa 7124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 10200391 - 10200306
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| || ||||||  ||||||| ||| |||||||||||| ||| ||||||||  | |||||||||||||    
T  10200391 aaatatggtttatgatagaacatcatggtgtaatttgatccatgtagccgacctcacttaatgggataatgcttggttgttgttgt 10200306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 25979316 - 25979231
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  25979316 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 28533674 - 28533750
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||  | |||||||| ||| ||||||||| || |||||||||||| || ||||||||||||||    
T  28533674 tatgatagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgta 28533750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 330
Target Start/End: Original strand, 42501208 - 42501374
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaa 263  Q
    ||||||||||||||||||||| |||||| | | ||| ||  ||||||||||||||||||| |       ||||| || | ||||| ||||| ||||||||    
T  42501208 agatggagggtagtcaaatcattagaggtagaggaaaacctagaaaaactataagagaaattattaagaaagatctatagattaatgagttggatagaaa 42501307  T
Q  264 tatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaa 330  Q
    ||||  ||||||||||| ||||  | | | ||| || ||| |||||||||  | |||||||||||||    
T  42501308 tatggaatatgatagaacattacagcgtcgtttaatccatgtagccgaccctacttagtgggataaa 42501374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 49347468 - 49347392
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  49347468 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 49377424 - 49377480
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagag 227  Q
    |||||||| ||||||||||||||||||||| | ||||||  ||||||||||| ||||    
T  49377424 agatggagagtagtcaaatcactagaggcagaggaagacctagaaaaactattagag 49377480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 1210952 - 1211027
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  1210952 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 5113934 - 5114025
Alignment:
Q  255 tgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| || | |||||||||| | ||||  | |||||||| ||| |||||||||||| ||||||||||||    |||||||||||||    
T  5113934 tgatagaaatttggtgtatgatagaacactatgacgtcatttgattcatgtagccgacctcaattagtgggataacgtttggttgttgttgt 5114025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 7921850 - 7921901
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaa 137  Q
    ||||||||||||||||||||  || ||| |||||||||||||||||| ||||    
T  7921850 gtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagagaa 7921901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 29577459 - 29577534
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  29577459 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 30202205 - 30202130
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  30202205 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 36340082 - 36339923
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||   ||||||||||||||||||   || ||||||||||| |||||| ||| ||||||  | || ||||||||||||   | || ||  |||    
T  36340082 gtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacctatagattttgtagtaaggcgggttgatcaga 36339983  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| ||   | ||||||||||| | | ||||||  ||||||||||| ||||||||||    
T  36339982 tggaggatacctagatcactagaggtagaggaagacctagaaaaactatcagagaaacta 36339923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 41560436 - 41560511
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| ||||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  41560436 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 2545182 - 2545104
Alignment:
Q  263 atatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgtt 341  Q
    |||||||||||||||||| ||||||||| | ||||||  || ||||||||  || ||||||||||| | | ||||||||    
T  2545182 atatgatatatgatagaacattatggtgtcgtttgatcaatttagccgacgccaattagtgggatagaccttggttgtt 2545104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 15085936 - 15086002
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  15085936 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 15086002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 17267843 - 17267797
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgataga 279  Q
    ||||| |||||||||| ||||| |||||||||||| |||||||||||    
T  17267843 aagatctagaaattaatgagttagatagaaatatggtatatgataga 17267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 17275354 - 17275400
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgataga 279  Q
    ||||| |||||||||| ||||| |||||||||||| |||||||||||    
T  17275354 aagatctagaaattaatgagttagatagaaatatggtatatgataga 17275400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 27704025 - 27704071
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    ||||||||||||||||||| |  ||||| ||||||||||||||||||    
T  27704025 gtagaaaagatggtggaaaacatgcttatgtggtttggacatgtaga 27704071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 30396831 - 30396729
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| |||||  ||| |||||||||||||| ||||||||| | |||||| | | ||||| ||| || ||||||||||||  | |||||||| |    
T  30396831 attaatgagttggatagggatacgatatatgatagaacattatggtggcgtttgatccgtgtagccaaccccacttagtgggataaggcttggttgtttt 30396732  T
Q  344 tgt 346  Q
    |||    
T  30396731 tgt 30396729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 30834215 - 30834097
Alignment:
Q  115 gtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagaga 214  Q
    ||||||||| | |||||| |||||| ||| | ||| | || |||  ||||||||  ||||||| ||||||||||||  |||||| | | ||||||  |||    
T  30834215 gtggtttggtcgtgtagagagaagacttgcagattctataataaggagagtagatcagatggaaggtagtcaaatcgatagagggagaggaagacctaga 30834116  T
Q  215 aaaactataagagaaacta 233  Q
    ||| |||||||||||||||    
T  30834115 aaagctataagagaaacta 30834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 43240454 - 43240396
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    |||||||||| | ||||| | |||||||| ||| |||||||||||| ||||||||||||    
T  43240454 tatgatagaacactatggcgtcatttgattcatgtagccgacctcacttagtgggataa 43240396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 52921277 - 52921363
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| | |||||||||| | ||| | | |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  52921277 aaatatggtttatgatagaacactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 8343125 - 8343072
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||||||||||||||  |||||||||||  ||| |||||||| ||||||    
T  8343125 gtagaaaagatggtggaaactaggcttaggtggactgggcatgtagagagaaga 8343072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 9002392 - 9002449
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    |||||| ||||||||||||||| | || | ||||| |||||||||||| |||||||||    
T  9002392 ttaggtagtttggacatgtagagaaaaaacttgtagattttgtagtaagaagagtaga 9002449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 17275211 - 17275292
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtag 167  Q
    ||||||||||| ||||||||  |||||||||||||||  |||||||| ||||    |||| ||||||||||||  |||||||    
T  17275211 gtagaaaagattgtggaaacttggcttaggtggtttgtgcatgtagagagaatccctgtagattttgtagtaaggagagtag 17275292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 52561659 - 52561590
Alignment:
Q  276 tagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttg 345  Q
    ||||| ||||||| || ||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||    
T  52561659 tagaacattatggcgaaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 15785018 - 15784982
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  15785018 atttgatccatgtagccgacctcatttagtgggataa 15784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 22175342 - 22175410
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||| | |||||||||| ||||||||   ||||||| ||| ||||||||| || ||||||||||||    
T  22175342 aaatatggtttatgatagaacattatggtagaatttgatccatgtagccgaccccacttagtgggataa 22175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 25460289 - 25460261
Alignment:
Q  170 tagatggagggtagtcaaatcactagagg 198  Q
    |||||||||||||||||||||||||||||    
T  25460289 tagatggagggtagtcaaatcactagagg 25460261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 34444530 - 34444638
Alignment:
Q  238 atagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggt 337  Q
    ||||| ||||| ||||| |||  ||||||| | ||| ||| || |||||||||  |||||||  || ||||||||| || ||||||||||||  | ||||    
T  34444530 atagagattaatgagttggatccaaatatggtttataataaaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggt 34444629  T
Q  338 tgttgttgt 346  Q
    |||||||||    
T  34444630 tgttgttgt 34444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 35672871 - 35672967
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| ||||||  | ||||||||||| ||||||||  |||||||  || |||| || |||  |||||||||||| || |||||| ||||||    
T  35672871 gagtttgatacaaatatagtttatgatagaatgttatggtgtaatttgatcgatgtagctgatctcgcttagtgggataagacttggttgatgttgt 35672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 15489772 - 15489612
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||| |||||  |||||||||||||| ||||| | |||||| |||||||| |||||||| |||||||||||| |||||||| |||  |||||||| |||    
T  15489772 ggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggagagtagattag 15489673  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| ||||  |||||||||||||| | ||||||  |||||||| |||||||||||||    
T  15489672 atggaggatagttgaatcactagaggcagaggaagacctagaaaaacaataagagaaacta 15489612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 152 - 345
Target Start/End: Complemental strand, 12577061 - 12576861
Alignment:
Q  152 gtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatatagaaa 244  Q
    |||||||  ||||||||  |||||||||||||||  ||||||||||||| | ||||||  |||||||||| |||| ||||||       |||| |||| |    
T  12577061 gtagtaaggagagtagatcagatggagggtagtcctatcactagaggcagaggaagacctagaaaaactacaagataaactattaagaaagatctagaga 12576962  T
Q  245 ttaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgtt 344  Q
    |||| |||||  ||||||||||| |||||||||||  ||||||||| ||||| || ||| ||||||||| || ||||||||||||| | |||||||||||    
T  12576961 ttaatgagttgaatagaaatatggtatatgatagaccattatggtgtcattttatacatgtagccgaccccaattagtgggataaagcttggttgttgtt 12576862  T
Q  345 g 345  Q
    |    
T  12576861 g 12576861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 299
Target Start/End: Original strand, 14749310 - 14749542
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  ||||||||  |||| |||||  | ||||| ||||||||||||||||| ||||||  |||  ||| ||| ||||  ||||| ||  |||    
T  14749310 gtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagagaagacctgtggattctgttgtaaggagagtcgatcaga 14749409  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    ||||||| ||||||||||||| ||||| | ||||||  |||||||||||||||||||||       | ||| |||| ||||||||||| |||||||||||    
T  14749410 tggaggggagtcaaatcactaaaggcagaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagttggatagaaatat 14749509  T
Q  267 gatatatgatagaatattatggtgacatttgat 299  Q
    | | | |||||||| | ||||| | ||||||||    
T  14749510 ggtttttgatagaacactatggcgtcatttgat 14749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 92 - 233
Target Start/End: Original strand, 6859402 - 6859543
Alignment:
Q  92 aagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatca 191  Q
    ||||||||||||| | ||| ||||||||||||||| ||||| |||||| ||||  ||| ||||||||   || || | |||||||||| |||||||| ||    
T  6859402 aagatggtggaaaacaggcataggtggtttggacacgtagagagaagacttgtggattctgtagtaaggggaataaattagatggaggatagtcaaacca 6859501  T
Q  192 ctagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| | | ||||||  ||||||||||||||||||||||    
T  6859502 ctagaggaagaggaagacctagaaaaactataagagaaacta 6859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 7359539 - 7359380
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  |||||||| ||||||||||   || ||||||||||||| |||||||| ||||||| |||| ||| ||||||||  ||||||||  ||    
T  7359539 ggtaacacctatagtagaaaatatggtggaaaataggtttaggtggtttgg-catgtagagagaagatatgtagattctgtagtaaggagagtagatcag 7359441  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||| ||||||||||||| | |||  |  |||||||| |||||||||||||    
T  7359440 atggaggatagtcatatcactagaggcagaggaaagcctagaaaaaccataagagaaacta 7359380  T

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Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 42199301 - 42199448
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||||||||  | |||||||||||||| |||||||| ||||||  |||| ||| ||||||||  ||||||||  | |||||| ||||||    
T  42199301 gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggagagtagtc 42199400  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||| || | |  |||||  ||||||||||| ||| ||||||    
T  42199401 aaatcactagggggagagaaagacctagaaaaactattagacaaacta 42199448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 346
Target Start/End: Original strand, 43475243 - 43475521
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  ||||||||||||||||||||  ||||||||||||||||  ||  ||| ||||||  |||| || |||||||||  ||||||||  |||    
T  43475243 gtagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcaga 43475342  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    |||||| |||||| ||||||| ||| | | | | ||| ||||||||| |||||||||||       |||||  ||| ||||| ||||| ||| |||||||    
T  43475343 tggaggatagtcagatcactataggaaaaagtaaacatagaaaaact-taagagaaactattaagaaagatccagagattaatgagttggatcgaaatat 43475441  T
Q  267 gatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||| |||| |||||  ||||||||  ||||||| ||  ||||| ||  || ||| ||||||||  | |||||||||||||    
T  43475442 gatttatggtagaacgttatggtgtaatttgatccacgtagccaactccacttaatgggataaggcttggttgttgttgt 43475521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 31636200 - 31636076
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| |||||  | |||||||||||||| |||||||| ||||||   ||  || |||||||||  |||||||| |||    
T  31636200 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattag 31636101  T
Q  173 atggagggtagtcaaatcactagag 197  Q
    |||| ||| ||||||||||||||||    
T  31636100 atggtggggagtcaaatcactagag 31636076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 6889011 - 6889155
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||||||||   |||||| |||||||||||||||||| |||||| ||||  ||| ||| ||||  | | || | |||||||||| ||||||||    
T  6889011 gaaaagatggtggaaaataggcttaagtggtttggacatgtagagagaagacttgtggattatgtggtaaggacaataaattagatggaggatagtcaaa 6889110  T
Q  189 tcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
     |||| |||| | | |||| |  ||||||||||||||||||||||    
T  6889111 ccacttgaggaagaggaaggcctagaaaaactataagagaaacta 6889155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 347
Target Start/End: Complemental strand, 43558093 - 43557832
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    |||||||||||||||||||   ||||||||||||||| ||| |||| |||||| ||||| ||  || ||||| ||||||||| |||||  | | | ||||    
T  43558093 tagaaaagatggtggaaactaagcttaggtggtttgggcatatagagagaagacttgtagatgctgcagtaagaagagtagattagataaatgatggtca 43557994  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaac---taagatatagaaattaacgagtttgatagaaatatgatatatgatagaatat 283  Q
     ||||||||| |   |||| |||  ||||||||||||||||||||    ||||| | || ||||  ||||| ||| |||||||| | |||||||||| ||    
T  43557993 tatcactagatg--gatgatgacctagaaaaactataagagaaaccgtaaagatttggagattattgagttggatcgaaatatggtttatgatagaacat 43557896  T
Q  284 tatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||     | |||||  || ||||||||| || ||||||||||||  | ||||||||||||||    
T  43557895 tatgacttaagttgatctatgtagccgaccccacttagtgggataaggcctggttgttgttgta 43557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 2712946 - 2713106
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||  |||||||||| || ||  | |||||||||||||| |||||||| ||||||  |||  ||| ||||  ||  ||||||||  ||    
T  2712946 ggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcag 2713045  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||  |||||||||||||||| ||   ||||||  ||||||||||||||||||||||    
T  2713046 atggaggagagtcaaatcactagagtcaggggaagacctagaaaaactataagagaaacta 2713106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 21093772 - 21093879
Alignment:
Q  91 aaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatc 190  Q
    |||| |||||||||   ||||||||| |||||| ||||||||  ||||| ||| | ||||||||||||  ||||||||  ||||||||| |||||| |||    
T  21093772 aaagttggtggaaaataggcttaggtagtttgggcatgtagagggaagacttggagattttgtagtaaagagagtagatcagatggaggatagtcagatc 21093871  T
Q  191 actagagg 198  Q
    ||||||||    
T  21093872 actagagg 21093879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 346
Target Start/End: Original strand, 14667765 - 14668053
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttgga--------catgtagatagaagatttgtaaattttgtagtaacaagag 164  Q
    |||||||||||  |||||||||||||||||||   | ||||||||||||||         |||||||| ||||||  |||| ||| ||||||||  ||||    
T  14667765 ggtagcacctatagtagaaaagatggtggaaaatagacttaggtggtttggggctttgggcatgtagagagaagacatgtacattatgtagtaaggagag 14667864  T
Q  165 tagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatatagaaattaacgagtttga 257  Q
    ||||  |||||||   |||| | |||||||||||||   |||  |  |||||||||||||||||| |||       |||| |||| ||||| ||||| ||    
T  14667865 tagatcagatggattatagttatatcactagaggcagcggaaatcctagaaaaactataagagaagctactaagaaagatctagagattaatgagttgga 14667964  T
Q  258 tagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |  || |||| | |||||||||| |||||||||  ||||||| ||| || |||||| || |||||||||||| || ||||||| |||||    
T  14667965 tccaagtatggtttatgatagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggataagacttggttgtagttgt 14668053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 1525659 - 1525806
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| |||||  | ||||||||| ||||||||||||| ||||||   || |||| || ||| |  ||||||||  |||||||||  ||||    
T  1525659 gtagaaaagatggtagaaactagacttaggtggcttggacatgtagagagaagacccgtgaattctgcagttaggagagtagatcagatggaggagagtc 1525758  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    | ||||||||||| |   | ||||  |||||||||| |||||||||||    
T  1525759 agatcactagaggtaggggtagacctagaaaaactacaagagaaacta 1525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 12492459 - 12492384
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||||||| ||||||||| || ||||||||||||  | |||||||||||||    
T  12492459 tatgatagaacactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 26884933 - 26884862
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagg 179  Q
    |||||||| |||||||||||||||| | |||||||||| || |||| |||| |||||||||  |||||||||    
T  26884933 ggcttaggcggtttggacatgtagagataagatttgtagatgttgtcgtaagaagagtagatcagatggagg 26884862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 346
Target Start/End: Original strand, 7678501 - 7678759
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||| |||||||||||  ||||||||| |||||| | |||||| | ||||  |||| ||| ||||||||  ||||||||     |||||| |||||    
T  7678501 gtagaaaa-atggtggaaac--ggcttaggttgtttgggcttgtagagaaaagacatgtagattctgtagtaaggagagtaga-----tggaggatagtc 7678592  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    | ||||||||||||| | |||||   || ||||| |||||||||||||       |||| |||| ||||| ||||| ||| |||||| | | ||| |||     
T  7678593 agatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataata- 7678691  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    || ||||||  |   |||||| ||| ||||||||| || ||||||||||||||| |||||||||||||    
T  7678692 aacattatgaggtagtttgatccatgtagccgaccccacttagtgggataaaacttggttgttgttgt 7678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 9917704 - 9917570
Alignment:
Q  99 tggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagagg 198  Q
    ||||||| |||||||| |||||||  | |||| | ||||||  |||  ||||||||||||  ||||| ||  ||||||||| |||||||||||| ||||     
T  9917704 tggaaactcggcttagttggtttgtgcgtgtaaagagaagacatgttgattttgtagtaaagagagtcgatcagatggaggatagtcaaatcacaagaga 9917605  T
Q  199 catatgaagacagagaaaaactataagagaaacta 233  Q
    || | || |||  ||||||||||| ||||||||||    
T  9917604 cagaggatgacctagaaaaactattagagaaacta 9917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 18351188 - 18351062
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggaca-tgtagatagaagatttgtaaattttgtagtaacaagagtagacta 171  Q
    |||||||||||  |||||||| ||||| |||||  |||||||||||||||| || |||||| ||||||  |||| ||| || | |||  ||||||||  |    
T  18351188 ggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgggcattgtagagagaagacctgtagattatgcaataaggagagtagatca 18351089  T
Q  172 gatggagggtagtcaaatcactagagg 198  Q
     | |||||||| |||||||||||||||    
T  18351088 aaaggagggtaatcaaatcactagagg 18351062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 18698894 - 18698952
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaa 229  Q
    |||||||| ||||||||||||||||||||| | ||| ||  ||||||||||||||||||    
T  18698894 agatggagagtagtcaaatcactagaggcagaggaatacctagaaaaactataagagaa 18698952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 33667218 - 33667284
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| |||||  | |||||||||||||| |||||||| ||||||    
T  33667218 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaaga 33667284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 346
Target Start/End: Original strand, 38684570 - 38684762
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagt 253  Q
    |||||| | ||||||||||| | || |||||||||| | | | ||||||  |||||||||| ||||||||||       ||||| |||| |||||  |||    
T  38684570 agagtatattagatggaggggattccaatcactagatgtaaaggaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaattagt 38684669  T
Q  254 ttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    | |||||||||||| ||  |||||||| ||||||| |  ||||||| ||| |||  |||| || ||||||| ||||| | |||||||||||||    
T  38684670 tggatagaaatatggtacttgatagaacattatggcgttatttgattcatgtagttgaccccacttagtggaataaagcttggttgttgttgt 38684762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3775240 - 3775187
Alignment:
Q  180 gtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||||||||||||||| | ||||||  ||||||||||||||| ||||||    
T  3775240 gtagtcaaatcactagaggcagaagaagacctagaaaaactataagataaacta 3775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 328
Target Start/End: Original strand, 27998582 - 27998705
Alignment:
Q  212 agaaaaactataagagaaacta-------agatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcata 304  Q
    ||||||||||||||||||||||       |||| || | ||||| ||||| ||||| || |||||||||||||||||||||||  | | |||||| |||     
T  27998582 agaaaaactataagagaaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatccatg 27998681  T
Q  305 tagccgacctcatttagtgggata 328  Q
    || |||||| || |||||||||||    
T  27998682 taaccgaccccacttagtgggata 27998705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 79515 - 79675
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||| |||||  ||||||||||||||||||| |    |||||||||||||||||||||| ||||||  | || ||| ||||||||  ||||| ||  |     
T  79515 ggtagtacctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacctatagattctgtagtaaggagagtcgatcaa 79614  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| | |||  ||||| ||||||  | ||||||  ||||||||||| ||| ||||||    
T  79615 atggaggatggtcggatcacaagaggctgaggaagacctagaaaaactatcagataaacta 79675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 4026598 - 4026530
Alignment:
Q  90 aaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    ||||||||||||||||  | ||||||||||||||||||||||| || |||  |||| ||| ||||||||    
T  4026598 aaaagatggtggaaactagtcttaggtggtttggacatgtagagaggagacctgtagattctgtagtaa 4026530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 6788147 - 6788325
Alignment:
Q  151 tgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatatagaa 243  Q
    ||||||||  ||||| ||| ||||||||| | |||| ||||||||||||| | ||||||  ||||||||||| | || |||||       |||  | |||    
T  6788147 tgtagtaaggagagtcgaccagatggaggatggtcagatcactagaggcagaggaagacctagaaaaactatcaaaggaactattaggaaagacttggaa 6788246  T
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagt 322  Q
    ||||| ||||| ||  |||||||||| |||||||||| ||||| | |  ||||||| ||| |||||||||||| |||||    
T  6788247 attaatgagttggactgaaatatgatttatgatagaacattatagcgtaatttgattcatgtagccgacctcacttagt 6788325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 20456970 - 20457038
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    |||| |||| |||||||||| ||||||| | |||||||| ||| ||||||||| || ||||||||||||    
T  20456970 aaatttgatgtatgatagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataa 20457038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 346
Target Start/End: Complemental strand, 408565 - 408494
Alignment:
Q  275 atagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  408565 atagaatactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 11002703 - 11002636
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagat 140  Q
    |||||||||||  |||||||| ||||| |||||  | |||||||||||||| ||||||| ||||||||    
T  11002703 ggtagcacctacagtagaaaacatggtagaaactagacttaggtggtttgggcatgtaggtagaagat 11002636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 28976934 - 28976859
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  28976934 tatgatagaacactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 29816589 - 29816664
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  29816589 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 30588465 - 30588606
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||||||||   || ||| ||||||||| ||| |    |||||| ||||| ||| ||||||||  |||||||| || ||||||| ||||||    
T  30588465 tagaaaagatggtggaaaataggtttaagtggtttgggcatattcggagaagacttgtagattctgtagtaaggagagtaga-ta-atggaggatagtca 30588562  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaa 230  Q
      |||| |||| |||| ||||||  |||||||||||||||||||    
T  30588563 ggtcacgagagacataggaagacctagaaaaactataagagaaa 30588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 11753124 - 11753166
Alignment:
Q  191 actagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||| |||| |||| ||||||||||||||||||||||    
T  11753124 actagaggcacatgatgacatagaaaaactataagagaaacta 11753166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 16347658 - 16347592
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  16347658 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 16347592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 28676597 - 28676755
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||| |||  |||||||||||||||||||   | |||||||||||| | |||||||| ||||||  | |||||| ||| ||||  | | || | |||    
T  28676597 ggtagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagacctttaaattatgtcgtaaggataatatattag 28676696  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaac 231  Q
    ||||||| | |||| || || ||||| | | ||||||  | ||||||||||||||||||    
T  28676697 atggaggattgtcagattacaagaggtagaagaagacctataaaaactataagagaaac 28676755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 36123264 - 36123182
Alignment:
Q  264 tatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||||||||||| ||||||||| | |||||| ||| ||  ||  | || |||||||||||| || |||||||||||||    
T  36123264 tatgatatatgatagaacattatggtggcgtttgatccatgtaatcggtcccacttagtgggataagacttggttgttgttgt 36123182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 38341627 - 38341545
Alignment:
Q  151 tgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||  || |||||| |||||||||| | || |||||||||||  | ||||||||  |||| |||||||||||||||||    
T  38341627 tgtagtaaggagggtagaccagatggagggcaatcgaatcactagagttagatgaagacttagaagaactataagagaaacta 38341545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 38684969 - 38685035
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  38684969 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 38685035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 18351011 - 18350902
Alignment:
Q  237 tatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtgg 336  Q
    |||||| ||||| ||||| |||||||||||| ||| || ||||| ||||||  | | |||||| ||| ||||||||||||  | ||||||| | || |||    
T  18351011 tatagagattaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtagccgacctcacatggtgggatgagacttgg 18350912  T
Q  337 ttgttgttgt 346  Q
     |||||||||    
T  18350911 atgttgttgt 18350902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 18855836 - 18855889
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| ||| ||||||||| || |||||||||||| || |||||||||||||    
T  18855836 atttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 18855889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 3000968 - 3001024
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgtact 349  Q
    |||||||| || ||||||||| || ||||||||||||  | ||||||||||||||||    
T  3000968 atttgatggatgtagccgaccccacttagtgggataaggcttggttgttgttgtact 3001024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 15168794 - 15168850
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgt 129  Q
    |||||||||||  |||||||||||||| ||||   |||| |||||||||||||||||    
T  15168794 ggtagcacctatagtagaaaagatggtagaaaataggctaaggtggtttggacatgt 15168850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 38685164 - 38685232
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||| | |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||    
T  38685164 aaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataa 38685232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 41109997 - 41109893
Alignment:
Q  96 tggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactag 195  Q
    ||||||||||  | ||||||||||||| ||||||||| |||||   | || ||||||||||||  | ||||||   |||||||| ||||||| ||||| |    
T  41109997 tggtggaaactggccttaggtggtttgaacatgtagagagaaggcctatagattttgtagtaaggatagtagatcggatggaggatagtcaattcactgg 41109898  T
Q  196 aggca 200  Q
    |||||    
T  41109897 aggca 41109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 327
Target Start/End: Original strand, 54470209 - 54470470
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||||||||||||  | |||| ||||||||| |||||||| ||||||  |||||||| ||||||||  |||||| |  |     
T  54470209 ggtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaa 54470308  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaata 265  Q
    |||||| |||||||||| |||||||||| | ||||||  |||||||||||||||||| ||       ||| | |||| ||||| ||||| ||||||||||    
T  54470309 atggagagtagtcaaattactagaggcaaaagaagaccaagaaaaactataagagaatctattaataaagttctagagattaatgagttggatagaaata 54470408  T
Q  266 tgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggat 327  Q
    || |||||||  ||  ||||| | | |||||||| ||| ||||| ||| || ||||||||||    
T  54470409 tggtatatgactgagcattattgcgtcatttgatccatgtagccaaccccacttagtgggat 54470470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 73 - 346
Target Start/End: Complemental strand, 40018463 - 40018189
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||| |||| |||||||||| |||||  |||||| ||||||||| ||||  || |||||| ||||| ||| | |||||      |||||  ||    
T  40018463 ggtagcacctatcgtaaaaaagatggtagaaacttggcttatgtggtttgggcatgccgagagaagacttgtatattctatagta------gtagatcag 40018370  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaata 265  Q
    ||| |||||||||||||||||||||||| || |||||  ||||||||||||||| |||||       ||||| |||| || || ||||| |||||  |||    
T  40018369 atgaagggtagtcaaatcactagaggcaaataaagacttagaaaaactataagaaaaactgttaagaaagatctagagatcaatgagttggatagggata 40018270  T
Q  266 tgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||||||||| |||| || | | |||||| ||| ||||||||| || ||||||| ||||||| || ||| ||||||    
T  40018269 tgatatatgatagaacattacggcgtcgtttgatccatgtagccgaccccacttagtggaataaaacttgtttgctgttgt 40018189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 346
Target Start/End: Complemental strand, 22420978 - 22420717
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| || | |||||||| ||| |||||||||  ||||||||  || |||||    
T  22420978 gaaaagatggtggaagctaggcttaggtgatttggacatgtagagagaagatctgaagattttgtaataagaagagtagataagatggagaatattcaaa 22420879  T
Q  189 tcactagaggcatatgaagacagagaaaaactataagaga----aactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatatt 284  Q
    ||||||||||||   |||||   ||||||||||||||| |    ||  ||||| |||| ||||| ||||| |||||| ||||| || ||||||||  |||    
T  22420878 tcactagaggcaagggaagatttagaaaaactataagaaactataagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcatt 22420779  T
Q  285 atggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||| |   ||||||  || |||  |||| || ||||||||||||  | |||||||||||||    
T  22420778 atggcgttgtttgatctatgtagttgaccccacttagtgggataaggcttggttgttgttgt 22420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 288
Target Start/End: Complemental strand, 42639296 - 42639078
Alignment:
Q  77 gcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatgg 176  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || |  ||| ||| ||||   | ||| | |||||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagagaagacttatggattctgtggtaaggggggtaaattagatgg 42639197  T
Q  177 agggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgat 269  Q
    |||| ||||||||||||||||| | | ||| |   |||||||||  ||||||||||       ||||| |||  ||||| ||||| |||||||||||| |    
T  42639196 aggggagtcaaatcactagaggtagaggaatatctagaaaaactgcaagagaaactattaagaaagatctagcgattaatgagttggatagaaatatggt 42639097  T
Q  270 atatgatagaatattatgg 288  Q
    || |||||||| |||||||    
T  42639096 atttgatagaacattatgg 42639078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 11389726 - 11389915
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||   ||| ||| ||||||||||| | ||||||||||| ||| || || || ||||  |||||| ||| ||||||||  ||||||||  ||    
T  11389726 ggtagcacctattctagtaaatatggtggaaactctgcttaggtggtctggccacgtggagagaatctttgtagattctgtagtaaggagagtagataag 11389825  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaa 262  Q
    |||||  ||||||||||||||||||| | | ||||||  |||||||||||| | ||||| ||||| |||| |||||  |||| |||||||    
T  11389826 atggaaagtagtcaaatcactagaggtagaggaagacgtagaaaaactatacgtgaaaccaagatctagagattaattagttggatagaa 11389915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 38904000 - 38903838
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagacta- 171  Q
    ||||||||| | | ||||||||||||||||||| |||||||| |||||||  ||||| || |||||| ||||| |||||||||||   ||||||||  |     
T  38904000 ggtagcaccgatcatagaaaagatggtggaaactcggcttagttggtttgagcatgtggagagaagacttgtagattttgtagtatggagagtagatcat 38903901  T
Q  172 --gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
      |  |||||||||||||||  ||||||||| ||||||||  || |||||||||||||||||||    
T  38903900 gcggaggagggtagtcaaatggctagaggcagatgaagacctag-aaaactataagagaaacta 38903838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 21879419 - 21879308
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||||||||| |||||||||| ||||||||||| | | ||||||  |||| ||| | ||||||  ||| |||| ||||||||||||||| |    
T  21879419 tagaaaagatggtggaaactcggcttaggtagtttggacatgcatagagaagacatgtagattctttagtaaggagaatagattagatggagggtagtga 21879320  T
Q  187 aatcactagagg 198  Q
    |||||| |||||    
T  21879319 aatcaccagagg 21879308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 328
Target Start/End: Original strand, 47372727 - 47372915
Alignment:
Q  147 attttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagac-agagaaaaactataagagaaact-------aagata 238  Q
    ||||||||| || ||||||||| |||| |||||||||||||||||||||||||| | | ||||  ||| ||||||||||||||||||       |||||     
T  47372727 attttgtaggaagaagagtagattagacggagggtagtcaaatcactagaggcagaggtagacttgag-aaaactataagagaaactactaataaagatc 47372825  T
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggata 328  Q
     ||| ||||| ||||| |||||||||||| ||||| |||||| ||||||| | | |||||| ||| ||||| | | || |||||||||||    
T  47372826 cagagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagcccatcccacttagtgggata 47372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 29398822 - 29398967
Alignment:
Q  75 tagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagat 174  Q
    |||||||||  |||||||||||||||||||    ||||| ||||||||| |||||||| ||||||  | || ||| |||||| |  |||||||||  |||    
T  29398822 tagcacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagacctatagattctgtagtgaggagagtagaccggat 29398921  T
Q  175 ggagggtagtcaaatcactagaggcatatgaagacagagaaaaact 220  Q
     |||| |||||||||||||||||||| | ||||||  |||||||||    
T  29398922 agaggatagtcaaatcactagaggcagaggaagacctagaaaaact 29398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 55028896 - 55028977
Alignment:
Q  151 tgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    |||||||| |||||||||  ||||| | |||||||||||||||||||||||| |||||   |||||||||||||||||||||    
T  55028896 tgtagtaagaagagtagataagatgcatggtagtcaaatcactagaggcataggaagagttagaaaaactataagagaaact 55028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 1380374 - 1380505
Alignment:
Q  78 cacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatgga 177  Q
    |||||| ||||||||| ||| | ||||| ||||||||||||||||| || ||||| |||| |  |||| ||||||||||||  | |||||| ||||| ||    
T  1380374 cacctaccgtagaaaacatgatagaaactcggcttaggtggtttgggcacgtagagagaaaacctgtagattttgtagtaaggacagtagattagataga 1380473  T
Q  178 gggtagtcaaatcactagaggcatatgaagac 209  Q
    | ||||| |||| |||||||| ||| ||||||    
T  1380474 gtgtagttaaattactagaggtataggaagac 1380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 7682100 - 7682030
Alignment:
Q  163 agtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| ||||||||||||||||| ||||||||||||| | ||||||   |||||||||||||||||||||    
T  7682100 agtagattagatggagggtagtcacatcactagaggcagaggaagacctggaaaaactataagagaaacta 7682030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 25574993 - 25575106
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||| ||||| ||| |||||||| | |||||||||| ||| |||||  ||||||| ||| |||| |||| |||||||||||||||  |    
T  25574993 aagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttagtgggataaggc 25575092  T
Q  333 gtggttgttgttgt 346  Q
     |||||||||||||    
T  25575093 ttggttgttgttgt 25575106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 28236389 - 28236464
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||||||||||||||  |||||||  || ||||||||| || |||||||||||| || |||||||||||||    
T  28236389 tatgatagaatattatggtgtaatttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgt 28236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 329
Target Start/End: Original strand, 31339574 - 31339789
Alignment:
Q  109 gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaaga 208  Q
    ||||||||||||||  |||||||| |||||| ||||| ||| ||||||||  | ||||||  | ||| || |||||| |||||||||||||| | |||||    
T  31339574 gcttaggtggtttgagcatgtagagagaagacttgtagattatgtagtaaggatagtagatcaaatgaagagtagtc-aatcactagaggcagaggaaga 31339672  T
Q  209 cagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagc 308  Q
    |  |||||||||||| ||||    |  || |||| ||||| ||||| ||| |||||||| || ||||||||| ||||||  | | |||| | ||| || |    
T  31339673 cctagaaaaactatatgaga----attatctagagattaatgagttggatcgaaatatggtacatgatagaacattatgacgtcgtttggtccatgtatc 31339768  T
Q  309 cgacctcatttagtgggataa 329  Q
    ||||| || ||||||||||||    
T  31339769 cgaccccacttagtgggataa 31339789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 31961505 - 31961386
Alignment:
Q  114 ggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagag 213  Q
    |||||||||| |||||||| |||||| ||||  ||| |||||| |  ||||| || ||||||||| | ||||||||||||||||| |   | ||||  ||    
T  31961505 ggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggagaggagtcaaatcactagaggtaggggtagacctag 31961406  T
Q  214 aaaaactataagagaaacta 233  Q
    ||||||||||||||||||||    
T  31961405 aaaaactataagagaaacta 31961386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 34233263 - 34233144
Alignment:
Q  114 ggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagag 213  Q
    ||||||||||||||||||| |||  |  |||| ||| ||||||||  ||||||||  ||||||||| | |||| ||||||||||||| | ||| ||  ||    
T  34233263 ggtggtttggacatgtagagagagaacatgtagattatgtagtaaggagagtagatgagatggaggatcgtcagatcactagaggcagaggaaaacctag 34233164  T
Q  214 aaaaactataagagaaacta 233  Q
    ||||||||| ||||||||||    
T  34233163 aaaaactatcagagaaacta 34233144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 40933031 - 40932924
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggtt 338  Q
    |||| ||||| ||||| |||||  |||||||||||||||||| ||||||| | | |||||||||| ||||||||| || || |||||||||  | || ||    
T  40933031 tagagattaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgatgcatgtagccgaccccacttggtgggataaggcttgatt 40932932  T
Q  339 gttgttgt 346  Q
    ||||||||    
T  40932931 gttgttgt 40932924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 44860862 - 44860933
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| | ||||||  |||| ||||||||||||    
T  44860862 tagaaaagatggtggaaaccaggcttagatggtttgggcatgtatagagaagagctgtagattttgtagtaa 44860933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 12725129 - 12725023
Alignment:
Q  93 agatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcac 192  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||| ||  ||||||| |||||| |  ||| ||||  || |||| ||||||| ||| ||    
T  12725129 agatggtggaaactcggcttaggtggtttagacatgtagagagaatatcggtaaattatgtagttaggagaatagatcagttggaaggtagtctaattac 12725030  T
Q  193 tagaggc 199  Q
    |||||||    
T  12725029 tagaggc 12725023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 26356634 - 26356780
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| ||||   | |||||||||||||| ||  |||| ||||||  |||   | |||||||||  ||||||||   ||||||||| ||||    
T  26356634 gtagaaaagatggtagaaaatagacttaggtggtttgggcacttagagagaagacatgtgggtattgtagtaaggagagtagatcggatggaggggagtc 26356733  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    ||||||||||||| |   ||||||  |||||||||||||||||||||    
T  26356734 aaatcactagaggtaggggaagacctagaaaaactataagagaaact 26356780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 179
Target Start/End: Original strand, 28497492 - 28497597
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||   ||||||||||| |||||||   |||||||||||||||| |||||||| |||||| ||||| ||| ||||||||  ||||||||  ||    
T  28497492 ggtagcacctttagtagaaaagattgtggaaaaa-ggcttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcag 28497590  T
Q  173 atggagg 179  Q
    |||||||    
T  28497591 atggagg 28497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 44719463 - 44719361
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| |||||||||| | ||||| |||||  ||||||||| | |||||| ||| |||||||||  | |||||||||||| || ||||||||||    
T  44719463 attaatgagttagatagaaatacggtatataatagagcattatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttggttgttgt 44719364  T
Q  344 tgt 346  Q
    |||    
T  44719363 tgt 44719361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 13805510 - 13805385
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaag 207  Q
    ||||||||||||||||  ||||||| ||||||  | || ||||||||| ||  ||| ||||  | ||||||| | |||| ||||||||||||| | |||     
T  13805510 ggcttaggtggtttgggtatgtagagagaagacctttagattttgtagcaaggagactagatcacatggaggattgtcagatcactagaggcagaggaaa 13805411  T
Q  208 acagagaaaaactataagagaaacta 233  Q
    ||  ||||||||||||||||||||||    
T  13805410 acctagaaaaactataagagaaacta 13805385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 31897706 - 31897548
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||||  ||||||||||||| |||||  | ||| |||||||||  |||||||| || |||  |||  ||| |||||| |  ||||| || |||    
T  31897706 ggtagcacctag--tagaaaagatggtagaaactagacttgggtggtttgcgcatgtagagagcagacctgtggattctgtagttaggagagtcgattag 31897609  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||| ||||| ||||||||||| |   | ||||  ||||||||||||||||||||||    
T  31897608 atggaggggagtcagatcactagaggtaggggtagacctagaaaaactataagagaaacta 31897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 345
Target Start/End: Complemental strand, 26024963 - 26024851
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||| ||||| ||| || | ||| | |||||||||| |||||||||  |||| || ||| |||||||||||| ||||||||||||  |    
T  26024963 aagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctcacttagtgggataaggc 26024864  T
Q  333 gtggttgttgttg 345  Q
     ||||||||||||    
T  26024863 ttggttgttgttg 26024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 30853445 - 30853505
Alignment:
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||||||||||| ||||||| | | ||||  ||||||||||||||||||||||    
T  30853445 atggagggtagtcaaatcacaagaggcaaagggagacttagaaaaactataagagaaacta 30853505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 33709926 - 33710050
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  ||||||||||||||||||||  || ||||||||||| | ||||| || ||||||  |||  ||| ||||||||  ||||| ||  ||    
T  33709926 ggtaacacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagtggatcag 33710025  T
Q  173 atggagggtagtcaaatcactagag 197  Q
    | |||||||||||| ||||||||||    
T  33710026 aaggagggtagtcagatcactagag 33710050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 49686892 - 49686976
Alignment:
Q  263 atatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||||||| ||||||||||| | | |||||  ||| ||||||||| || |||||||||||| || ||||||||| ||||    
T  49686892 atatgatatatgatggaatattatggcgtcgtttgaaccatgtagccgaccccacttagtgggataagacttggttgttgctgta 49686976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 49738657 - 49738549
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggtt 338  Q
    |||||||||| ||||| |||||   || ||||||||| |||| ||||||| |   |||||| ||| ||||||||| |||||||||||||||  | |||||    
T  49738657 tagaaattaatgagttggatagggttaggatatatgacagaacattatggcggtgtttgatccatgtagccgaccccatttagtgggataaggcttggtt 49738558  T
Q  339 gttgttgta 347  Q
    |||||||||    
T  49738557 gttgttgta 49738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 2557774 - 2557671
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatatta-tggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttg 342  Q
    ||||||||||| ||| |||||||| | |||||||||| |||| |||||  ||||||| ||| ||||| ||  |||||||||||||||  | |||||||||    
T  2557774 attaacgagttggatcgaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactccatttagtgggataaggcttggttgttg 2557675  T
Q  343 ttgt 346  Q
    ||||    
T  2557674 ttgt 2557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 46715649 - 46715586
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||  ||||||||||||||||||||  |||||||||||| ||| |||||||| ||||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaaga 46715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 56375497 - 56375572
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||  | |||||||| ||| |||||||||||| |||||||||||| || |||||||||||||    
T  56375497 tatgatagaacactatgacgtcatttgatccatgtagccgacctcacttagtgggataagacttggttgttgttgt 56375572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 17666285 - 17666163
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagaca 210  Q
    ||||||||||||||||||||||  ||| |  |||| ||| |||||||| |||||||||  | || |||  |||||| || || ||||  ||||||||||     
T  17666285 ttaggtggtttggacatgtagagggaaaacatgtagattatgtagtaagaagagtagatgaaatagagaatagtcatattacaagagatatatgaagact 17666186  T
Q  211 gagaaaaactataagagaaacta 233  Q
     ||||||| ||||||||||||||    
T  17666185 tagaaaaaatataagagaaacta 17666163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 347
Target Start/End: Complemental strand, 31403147 - 31403033
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| |||||  |||| ||||||||| || |||||||||||  |||||||||    ||||| ||| ||| ||||| || ||||| |||||||||    
T  31403147 aagatctagagattaattagttggatagaaatgtggtatatgatagagcattatggtgttgcttgatccatgtagacgaccccacttagtaggataaaac 31403048  T
Q  333 gtggttgttgttgta 347  Q
     ||||||||||||||    
T  31403047 ttggttgttgttgta 31403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 37042777 - 37042667
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||  ||||| |||||||||| | ||| |||||||| ||||||||| | |||||| ||| |||||||||  | ||||||||||||  |    
T  37042777 aagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccgacccgacttagtgggataaggc 37042678  T
Q  333 gtggttgttgt 343  Q
     ||||||||||    
T  37042677 ttggttgttgt 37042667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 42293528 - 42293470
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    ||||||||||  |||||||||||| ||||||| |||||||||||||||||  |||||||    
T  42293528 gtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgtaga 42293470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 51252741 - 51252675
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||||   ||||||||||||||||||||  |||||||||||| ||| |||||||| ||||||    
T  51252741 ggtagcacctctagtagaaaagatggtggaaactaggcttaggtggtatgggcatgtagagagaaga 51252675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 21528497 - 21528570
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||||| |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  21528497 tgatagaacactatggtggcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 32339734 - 32339783
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatgg 288  Q
    |||| ||||||||||| |||||| |||||||||||||||||| |||||||    
T  32339734 tagagattaacgagttggatagagatatgatatatgatagaaaattatgg 32339783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 8459291 - 8459155
Alignment:
Q  97 ggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactaga 196  Q
    ||||||||| |  ||| |||||||||||||| |||| ||||||  |||| ||| |||| |||  |||||||| || |||  | ||||||||||||||| |    
T  8459291 ggtggaaactcaacttgggtggtttggacatatagagagaagacatgtagattctgtaataaggagagtagattacatgaggagtagtcaaatcactaaa 8459192  T
Q  197 ggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||| | ||||||  | |||||||| |||| ||||||    
T  8459191 ggcagaggaagacctaaaaaaactaaaagataaacta 8459155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 28236185 - 28236257
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgta 145  Q
    |||||||||||  ||||||||| |||||||||   ||||||| |||||||| |||||||| |||||| |||||    
T  28236185 ggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagacttgta 28236257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 35555927 - 35555767
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| |||||  | |||||||||||||| ||| |||| ||||||  |||  ||| |||||| |  |||||||| |||    
T  35555927 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagattag 35555828  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    || ||||  |||    |||||||||| |   | ||||  ||||||||||||||||||||||    
T  35555827 atagaggagagttgggtcactagaggtaggggtagacctagaaaaactataagagaaacta 35555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 37797854 - 37797922
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatt 141  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||||    
T  37797854 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagatt 37797922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 45185294 - 45185214
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagta 166  Q
    ||||||||||||||||| |   |||||||||| ||||| ||| |||| | |||| ||||| |||||||||||| |||||||    
T  45185294 gtagaaaagatggtggataataggcttaggtgatttgggcatatagagacaagacttgtagattttgtagtaagaagagta 45185214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 49987518 - 49987570
Alignment:
Q  181 tagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||||||||| | ||||||  ||||||||||||||||||||||    
T  49987518 tagtcaattcactagaggcagaggaagacctagaaaaactataagagaaacta 49987570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 50471541 - 50471653
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||||||||  || ||| ||||||||| |||||||| ||||||  ||| |||| | || |||  ||||||||| | |||||| | |||     
T  50471541 gtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagacctgtgaattctatattaaggagagtagaccatatggagaggagtt 50471640  T
Q  186 aaatcactagagg 198  Q
    |||| ||||||||    
T  50471641 aaattactagagg 50471653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 53517636 - 53517692
Alignment:
Q  177 agggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||| ||||||||||||| | ||||||  ||||||||| ||||||||||||    
T  53517636 agggtagtcagatcactagaggcagaggaagacttagaaaaactgtaagagaaacta 53517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 55388313 - 55388213
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| ||| |||||||||| |||||||||| ||| |||||  ||||||| ||| | | ||||| || ||||||||||||  | ||||||||||    
T  55388313 attaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtgggataaggcttggttgttgt 55388214  T
Q  344 t 344  Q
    |    
T  55388213 t 55388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 55579070 - 55579194
Alignment:
Q  109 gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaaga 208  Q
    |||||||||||| || |||||| | ||||||| | ||||| ||||||||  ||||||| | | ||||||||  ||||||||||  ||||| | | |||||    
T  55579070 gcttaggtggttcgggcatgtaaagagaagatatataaatgttgtagtatgaagagtaaatttgatggaggagagtcaaatcaaaagaggtagaagaaga 55579169  T
Q  209 cagagaaaaactataagagaaacta 233  Q
    |  ||||||||||||| | ||||||    
T  55579170 cctagaaaaactataaaataaacta 55579194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 6843784 - 6843839
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatgg 288  Q
    ||||| |||| ||||| |||||||||||||||||| ||||| |||||| |||||||    
T  6843784 aagatctagagattaatgagtttgatagaaatatgttatataatagaacattatgg 6843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 21107025 - 21107154
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagat---ttgtaaattttgtagtaacaagagtaga-ctagatggagggtagtcaaatcactagaggcatat 203  Q
    ||||||||| |||||| ||| |||| ||||||    ||||| ||| ||||||||  ||||| || | |||||||||||||||| |||||| || |||       
T  21107025 ggcttaggtagtttgggcatctagagagaagacgacttgtagattatgtagtaaggagagtggatcaagatggagggtagtcagatcactggatgcagcg 21107124  T
Q  204 gaagacagagaaaaactataagagaaacta 233  Q
    ||||||  ||||||||||||||||||||||    
T  21107125 gaagacctagaaaaactataagagaaacta 21107154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 29209277 - 29209174
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| |||||||||||| |||||||||||  ||||||| |   ||||||  || ||||||||| || ||| |||||||| || |||||||| |    
T  29209277 attaatgagttggatagaaatatggtatatgatagagcattatggcgttgtttgatcaatgtagccgaccccacttaatgggataagacttggttgtttt 29209178  T
Q  344 tgta 347  Q
    ||||    
T  29209177 tgta 29209174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 31959889 - 31959814
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  31959889 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 35690478 - 35690553
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| ||||||| |  ||||||| ||| ||||||||| || |||||||||||| || ||||| |||||||    
T  35690478 tatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggtttttgttgt 35690553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 38571024 - 38570961
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||  ||| ||||||| ||||||||  |||||||||||||||| |||||||| ||||||    
T  38571024 agcacctatagtacaaaagatagtggaaactaggcttaggtggtttgggcatgtagaaagaaga 38570961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 41192838 - 41192921
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagt 156  Q
    |||||||||||  ||||||||||||||||||||  | |||||||| ||||  |||||||| ||||||  |||| ||| ||||||    
T  41192838 ggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtagt 41192921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 44047628 - 44047569
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    |||||||||||  ||||||||| |||| ||| |  |||||||||||||||||||||||||    
T  44047628 ggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatgtaga 44047569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 45209280 - 45209205
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||||||||||| |   |||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  45209280 tatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 45209205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 52569590 - 52569515
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  52569590 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 4136995 - 4136886
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||| ||||| || || || ||||||||||| |||||||| | ||||  |||| |||||||| |||   |||||||  | ||| |||||||||    
T  4136995 gtagaaaagatagtggagactcgactaaggtggtttgggcatgtaga-aaaagacatgtagattttgtaataaggggagtagatcatatgaagggtagtc 4136897  T
Q  186 aaatcactaga 196  Q
    |||||||||||    
T  4136896 aaatcactaga 4136886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 21945840 - 21945758
Alignment:
Q  151 tgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||  ||||||||  ||||||||| |||||| ||||||||||||  | ||||||  ||||||||||| | ||||||||    
T  21945840 tgtagtaaggagagtagatcagatggaggatagtcacatcactagaggctgaggaagacctagaaaaactatcatagaaacta 21945758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 30621484 - 30621406
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaatttt 151  Q
    |||||||| ||  |||||||||||||||||||   || ||||||| ||||| || ||||| |||||||||||| |||||    
T  30621484 ggtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgggcacgtagagagaagatttgtagatttt 30621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 31459032 - 31459098
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| ||||   |||||||||||||||| |||||| | ||||||    
T  31459032 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 44860933 - 44860995
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||| ||||||||| ||||||||||| | ||||||   ||||||||||||| |||||||    
T  44860933 agatggagcgtagtcaaaacactagaggcaaaggaagaccttgaaaaactataagggaaacta 44860995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 45176043 - 45176093
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    |||||||||||||||| |||||||| |||||| ||||| |||||| |||||    
T  45176043 ggcttaggtggtttgggcatgtagagagaagacttgtagattttgaagtaa 45176093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 50967110 - 50967028
Alignment:
Q  264 tatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||| ||||||| |||| ||||||  |  ||||||| ||| |||||||||||| ||||||| ||||| | |||||||||||||    
T  50967110 tatggtatatgaaagaaaattatgtcgtaatttgatccatgtagccgacctcacttagtggaataaagcttggttgttgttgt 50967028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 55768781 - 55768635
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatt-tgtaaattttgtagtaacaagagtagacta 171  Q
    |||||||||||  |||||||||||  ||||||   || ||||||||||| |||||||| | |||| | | | |||||||||| ||||  ||| |||| |     
T  55768781 ggtagcacctatagtagaaaagatcatggaaaataggtttaggtggtttagacatgtaaagagaaaaatctttaaattttgtggtaaggagaatagattg 55768682  T
Q  172 gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaa 218  Q
    |||||| | || ||| ||||||||||||| | ||||||| |||||||    
T  55768681 gatggaagataatcagatcactagaggcagaagaagacatagaaaaa 55768635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 55833037 - 55832891
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatt-tgtaaattttgtagtaacaagagtagacta 171  Q
    |||||||||||  |||||||||||  ||||||   || ||||||||||| |||||||| | |||| | | | |||||||||| ||||  ||| |||| |     
T  55833037 ggtagcacctatagtagaaaagatcatggaaaataggtttaggtggtttagacatgtaaagagaaaaatctttaaattttgtggtaaggagaatagattg 55832938  T
Q  172 gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaa 218  Q
    |||||| | || ||| ||||||||||||| | ||||||| |||||||    
T  55832937 gatggaagataatcagatcactagaggcagaagaagacatagaaaaa 55832891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 2589008 - 2589117
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||| |||||  | |||||||||||| | |||||||| |||| | ||||  ||| |||||| |  ||||||||  |||||||||| ||| |||    
T  2589008 gaaaagatggtagaaactagacttaggtggtttaggcatgtagagagaaaacttgtggattctgtagttaggagagtagatcagatggaggggagttaaa 2589107  T
Q  189 tcactagagg 198  Q
    | ||||||||    
T  2589108 ttactagagg 2589117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 21214824 - 21214775
Alignment:
Q  109 gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    ||||||||||||||| |||||||| |||||| |||| |||| ||||||||    
T  21214824 gcttaggtggtttgggcatgtagagagaagacttgttaattctgtagtaa 21214775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 29398981 - 29399086
Alignment:
Q  241 gaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgt 340  Q
    |||||||||||||| ||  |||||| | | |||||||||| ||||||| |  ||||||| ||| |||| |||| || ||||||||| ||  | |||||||    
T  29398981 gaaattaacgagttggaacgaaataaggtttatgatagaacattatggcgtaatttgattcatgtagctgaccccacttagtgggaaaaggcttggttgt 29399080  T
Q  341 tgttgt 346  Q
    ||||||    
T  29399081 tgttgt 29399086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 45094426 - 45094381
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    |||||| ||||||| |||| ||||||||||||||||| ||||||||    
T  45094426 tagaaaggatggtgaaaactcggcttaggtggtttgggcatgtaga 45094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 47265280 - 47265195
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||| |||| |||||||||| | ||| |||  ||||||| ||| |||||||||||| ||||||||||||  | ||||| |||||||    
T  47265280 aaatttgatctatgatagaacactatagtgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttattgttgt 47265195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 47611742 - 47611795
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||| ||||||   |||||||||||||||| |||||||| ||||||    
T  47611742 gtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaaga 47611795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 48622639 - 48622542
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||  |||| || | |||||||||| | ||||| | ||||| || ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  48622639 gagtttgatccaaatttggtgtatgatagaacactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 49738884 - 49738835
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttg 122  Q
    |||||||||||  |||||||||||||| ||||| ||||||||||| ||||    
T  49738884 ggtagcacctattgtagaaaagatggtagaaactcggcttaggtgatttg 49738835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 55007915 - 55008028
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||| ||||| ||  |||||||| | |||||||||  ||||||  |  ||||||| ||| ||||||||| || ||||||||||||  |    
T  55007915 aagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgggataaggc 55008014  T
Q  333 gtggttgttgttgt 346  Q
     |||||||||||||    
T  55008015 ttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 23906372 - 23906296
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||| | |||||||| ||| |||| |||| || ||||||||||||  | ||||||||||||||    
T  23906372 tatgatagaacactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgta 23906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 28764415 - 28764371
Alignment:
Q  305 tagccgacctcatttagtgggataaaacgtggttgttgttgtact 349  Q
    ||||||||||||||| |||||||||  | ||||||||||||||||    
T  28764415 tagccgacctcatttggtgggataaggcttggttgttgttgtact 28764371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 30853373 - 30853425
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||| ||||| |||||||| | ||||||||||||||| |||||||| ||||||    
T  30853373 tagacaagatagtggaaactcagcttaggtggtttgggcatgtagagagaaga 30853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 31961318 - 31961266
Alignment:
Q  294 tttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| ||| |||||||||||| ||||||||||||  | |||||||||||||    
T  31961318 tttgattcatgtagccgacctcacttagtgggataaggcttggttgttgttgt 31961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 42285967 - 42285856
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| |||||  | |||||||||||||| |||||| | ||||||  |||  ||| |||||| | ||||| |||  || ||||||| ||||    
T  42285967 gtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagacctgtggattctgtagtcagaagagcagatcag-tggaggggagtc 42285869  T
Q  186 aaatcactagagg 198  Q
    | |||||||||||    
T  42285868 agatcactagagg 42285856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 46372026 - 46372186
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  || ||||| || || |||||  | |||||||||||||  |||||||| ||||||  |||  ||| |||| ||| ||||| |||  ||    
T  46372026 ggtagcacctatagtcgaaaatattgtagaaactagacttaggtggtttgtgcatgtagagagaagacatgtggattctgtactaagaagagcagatcag 46372125  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    || ||||| || || ||||||||||| |   | ||||  ||||||||||||||||||||||    
T  46372126 atagaggggagccagatcactagaggtaggggtagacctagaaaaactataagagaaacta 46372186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 48033175 - 48033247
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||| || ||||| |||| |||| ||||||||||||||| | ||||||  |  |||||||||||||||||||    
T  48033175 agagtggattagattgaggatagttaaatcactagaggcagaggaagacttaagaaaactataagagaaacta 48033247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 49987443 - 49987487
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgta 130  Q
    |||||||||||||||||||   |||||||||||||||| ||||||    
T  49987443 gtagaaaagatggtggaaaataggcttaggtggtttggtcatgta 49987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 50662402 - 50662462
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtgg-tttggacatgtagatagaagatttgta 145  Q
    |||||||||||||||||||   ||||||||||| ||||| |||||||| |||||| |||||    
T  50662402 gtagaaaagatggtggaaagtaggcttaggtggttttgggcatgtagagagaagacttgta 50662462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 51009323 - 51009231
Alignment:
Q  141 ttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||| ||| ||||||||  ||||| ||  |||||||||||||| ||||||||||| |   | |||||| |||||||||| |||| |||||||    
T  51009323 ttgtagattatgtagtaatgagagttgataagatggagggtagttaaatcactagacgtggaggaagaccgagaaaaactttaagggaaacta 51009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 55028992 - 55029056
Alignment:
Q  235 gatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgat 299  Q
    ||| |||| ||||| ||| | |||||||||||| |||||||||||| ||||||| | ||||||||    
T  55028992 gatctagagattaatgagctagatagaaatatgttatatgatagaacattatggcgtcatttgat 55029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 347
Target Start/End: Original strand, 29520695 - 29520932
Alignment:
Q  116 tggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaa 215  Q
    |||||||| |||||||| |||||| ||||| ||||||||||||  ||||||||  ||||||||| |||||||||||| ||||| | | |||| |  ||||    
T  29520695 tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggtagaggaag-cctagaa 29520793  T
Q  216 aaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagc 308  Q
    |||||||||||||||||       | ||| |||| ||||| ||||| |||  ||||||| | |||||||||| ||||||| |  ||||||| ||| ||||    
T  29520794 aaactataagagaaactgttaggaacgatttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 29520893  T
Q  309 cgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    | ||| |||||||||||||||  | ||||||||||||||    
T  29520894 ccaccccatttagtgggataatgcttggttgttgttgta 29520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 288
Target Start/End: Original strand, 37826341 - 37826511
Alignment:
Q  121 tggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaact 220  Q
    ||||||||| || ||||||| | || |||||| |||||  | ||||||  ||||| || ||||||||||||||||||||| | | ||||  ||| |||||    
T  37826341 tggacatgttgagagaagatatatagattttgaagtaaggaaagtagatcagatgaagagtagtcaaatcactagaggcagagggagacctagataaact 37826440  T
Q  221 ataagagaaac---taagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatgg 288  Q
    |||||||||||   |||||| |||| |||| |||||| |||||||||||| ||||||||||| ||||||||    
T  37826441 ataagagaaactattaagatctagagattagcgagttggatagaaatatggtatatgatagagtattatgg 37826511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 45512775 - 45512615
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||| ||||||    |||||| |||||||| ||| || | ||||||| | || |||  |||||||  |||||||| |||    
T  45512775 ggtagcacctatagtagaaaagatgatggaaaataagcttagatggtttgggcatataaagagaagatctctagattcggtagtaagcagagtagattag 45512676  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||  | |||||||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  45512675 atggcagatagtcaaatcactagaggcagaggaagacctagaaaaactataagagaaacta 45512615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 9695633 - 9695760
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||| |||||   |||| ||| || |||||  ||||||||  ||    
T  9695633 ggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaagtcctgtagattctgaagtaaagagagtagatgag 9695732  T
Q  173 atggagggtagtcaaatcactagaggca 200  Q
    ||   | |||||||||||||||||||||    
T  9695733 ataaggagtagtcaaatcactagaggca 9695760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 280
Target Start/End: Original strand, 16917199 - 16917399
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||| ||||  |||||||||||||||| |||||| | |||||  ||||| | ||||||||||  ||||||||  |||| |||| |||||    
T  16917199 gtagaaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaaggcttgtaga-tttgtagtaaggagagtagatcagattgaggatagtc 16917297  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    ||||||||| ||| | | ||||||  |||||| ||||| | ||||||       ||||| |||| ||||| ||||| |||||||||||| ||||||||||    
T  16917298 aaatcactacaggtagaagaagacctagaaaagctataggtgaaactatcaaggaagatttagagattaatgagttggatagaaatatggtatatgatag 16917397  T
Q  279 aa 280  Q
    ||    
T  16917398 aa 16917399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 29700278 - 29700439
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||||| |||||   |||||||||||||||| ||| |||| | ||||    |  ||| ||||||||  |||||||| |||    
T  29700278 ggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattag 29700377  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaa 234  Q
    ||||||| |||||| ||||||||||| | | ||||||  |||||||||| ||||||||||||    
T  29700378 atggaggatagtcatatcactagaggtagaggaagacctagaaaaactaaaagagaaactaa 29700439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 314
Target Start/End: Complemental strand, 43904909 - 43904697
Alignment:
Q  109 gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaaga 208  Q
    |||||||||||||||||||||||| ||||||  | || || ||||||||| |||| ||||  ||||||||| ||||||||| || ||||| | | |||||    
T  43904909 gcttaggtggtttggacatgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggatagtcaaattacaagaggtacaggaaga 43904810  T
Q  209 cagagaaaaactataagagaaac---ta----agatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgc 301  Q
    |  ||||| ||||||||||||||   ||    |||| |||| ||||| ||||| |||  ||||||| | |||||||||| ||||||| |  ||||||| |    
T  43904809 cctagaaatactataagagaaacggttatgagagatttagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatcc 43904710  T
Q  302 atatagccgacct 314  Q
    || ||||||||||    
T  43904709 atgtagccgacct 43904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 347
Target Start/End: Original strand, 12611642 - 12611780
Alignment:
Q  212 agaaaaactataagagaaacta---agatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagc 308  Q
    ||||||||||||||||||||||   |||| |||| || || ||||| | ||||||||||||||||| |||||  |||||||| | |||||| ||| ||||    
T  12611642 agaaaaactataagagaaactagtaagatctagagataaatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagc 12611741  T
Q  309 cgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||| | || ||||||||||||  | ||||||||||||||    
T  12611742 cgatcccaattagtgggataaggcttggttgttgttgta 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 280
Target Start/End: Complemental strand, 10080173 - 10079973
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||||||||||||  ||| | | |||||||| |||||||| ||||||  ||   ||||||||||||  ||||||||  | ||| |||| ||||    
T  10080173 gtagaaaagatggtggaaactaggcct-gatggtttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggggagtc 10080075  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    ||||||||||||| | | ||||||  ||| ||||||||||| |||||       ||||| |||| ||||| ||||| |||||||||||||||| ||||||    
T  10080074 aaatcactagaggtagaggaagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatag 10079975  T
Q  279 aa 280  Q
    ||    
T  10079974 aa 10079973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 326
Target Start/End: Original strand, 32930999 - 32931222
Alignment:
Q  109 gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaaga 208  Q
    ||||||||| |||||||||||||| |||| || | || ||| ||||||||  ||| ||||  ||||||||| |||||| ||||||||||||| | |||||    
T  32930999 gcttaggtgatttggacatgtagaaagaaaatctatagattctgtagtaaggagactagatcagatggaggatagtcatatcactagaggcagaggaaga 32931098  T
Q  209 cagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgc 301  Q
    |  | ||||||||| |||||||||       ||||| | |||||||| ||||| ||  |||||||| | |||||||||| |||||||    ||||||| |    
T  32931099 cctaaaaaaactatcagagaaactattaggaaagattttgaaattaatgagttgga-cgaaatatggtgtatgatagaacattatggcataatttgatcc 32931197  T
Q  302 atatagccgacctcatttagtggga 326  Q
    || ||||||||| || |||||||||    
T  32931198 atgtagccgaccccacttagtggga 32931222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 346
Target Start/End: Complemental strand, 30198472 - 30198266
Alignment:
Q  147 attttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatat 239  Q
    ||||||||||||| ||||||||  ||||| ||| ||||||   ||||||||||| | | ||||  ||||||||||||||||||| ||       ||||||    
T  30198472 attttgtagtaacgagagtagatcagatgaaggatagtcagtacactagaggcagaggtagacttagaaaaactataagagaaattattaagaaagatat 30198373  T
Q  240 agaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttg 339  Q
     || ||||| ||||| ||| | |||||| | ||||||||||||||||||||   ||||||  || | ||||||| || ||||||||||||  | ||||||    
T  30198372 tgagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgttgccgaccccacttagtgggataaggcttggttg 30198273  T
Q  340 ttgttgt 346  Q
    |||||||    
T  30198272 ttgttgt 30198266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 38178471 - 38178380
Alignment:
Q  142 tgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||| ||||||||||||  ||||||||  ||||||||| |||||||||| ||||||| | | ||||||  ||||||||||||||||||||||    
T  38178471 tgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaacta 38178380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 41972045 - 41971910
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||||||||    | |||||||||||||||||||||| ||||||  |||| ||||| ||| ||  ||||||||  || |||| | |||||    
T  41972045 gtagaaaagatggtggaaaataagtttaggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatcaggtggacgatagtc 41971946  T
Q  186 aaatcactagaggcatatgaagacagagaaaaacta 221  Q
    ||||||||||||||| | ||| ||  ||||||||||    
T  41971945 aaatcactagaggcaaaggaaaacctagaaaaacta 41971910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 23492214 - 23492316
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||| ||||| || ||| ||||||||| || |||||| |||||  | || |||||||    
T  23492214 attaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgaccccacttagtgagataaggcttgtttgttgt 23492313  T
Q  344 tgt 346  Q
    |||    
T  23492314 tgt 23492316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 30559730 - 30559855
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaag 207  Q
    |||||||||||||||| ||| |||| ||||||  |||| ||||||||||||  | ||| ||  ||||||||| |||||  ||||||||||  | ||||||    
T  30559730 ggcttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatggaggatagtcggatcactagagatagatgaag 30559829  T
Q  208 acagagaaaaactataagagaaacta 233  Q
    ||  | ||||||||||||||||||||    
T  30559830 acttaaaaaaactataagagaaacta 30559855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 5908704 - 5908808
Alignment:
Q  129 tagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagaga 228  Q
    |||| ||||||  |||| ||||||||||||  ||||||||  || |||||| | |||| |||||||||| |||| ||||||  |||||||||||||||||    
T  5908704 tagagagaagacctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagagacataggaagacctagaaaaactataagaga 5908803  T
Q  229 aacta 233  Q
    |||||    
T  5908804 aacta 5908808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 7046336 - 7046471
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||| | ||||||||||||||||||| | |||||||| |||||||| |||||||| |||| |   |||  || ||||||||  ||||||||  ||    
T  7046336 ggtagcaccaatcgtagaaaagatggtggaacctcggcttagctggtttgggcatgtagagagaaaacacgtagcttctgtagtaaggagagtagatcag 7046435  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagac 209  Q
     |||||| ||||||||||||||| |||| | ||||||    
T  7046436 -tggaggatagtcaaatcactagcggcaaaggaagac 7046471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 10108911 - 10109039
Alignment:
Q  171 agatggagggtagtcaaatc--actagaggcatatgaagacagagaaaaactataagagaaactaa-------gatatagaaattaacgagtttgataga 261  Q
    |||||||||||||||||| |  ||||| |||| |  |||||  |||||||| ||||||||||||||       ||| |||| ||||||||||||||||||    
T  10108911 agatggagggtagtcaaaacccactagtggcagagaaagacctagaaaaaccataagagaaactaataagaaagatctagagattaacgagtttgataga 10109010  T
Q  262 aatatgatatatgatagaatattatggtg 290  Q
     ||||| |||||||||||| |||||||||    
T  10109011 gatatgttatatgatagaacattatggtg 10109039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 30748472 - 30748619
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||||||| |  |||||||||||||||| |||||||| ||||||  |||| ||| | ||||||  | ||||||  | ||  |||||||||    
T  30748472 gtagaaaagatggtggaatcaaggcttaggtggtttgggcatgtagagagaagacctgtagattctatagtaagcaaagtagatcaaatatagggtagtc 30748571  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||  || | ||||||   |||||||  ||||||||||||    
T  30748572 aaatcactagaatcagaggaagaccttgaaaaaccgtaagagaaacta 30748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 41444606 - 41444547
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    |||||||||||  ||||||||||||||||||||  || ||||||||||||||||||||||    
T  41444606 ggtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgtaga 41444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 2776509 - 2776443
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||||| |||||||| |||||| ||||| ||||||||||||||||| ||||| || ||||||    
T  2776509 ggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaaga 2776443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 39702163 - 39702232
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttg 342  Q
    |||||||| ||||||||  ||||||||  || ||||||||| |||||||||||||||||| |||||||||    
T  39702163 tgatagaacattatggtatcatttgatctatgtagccgaccacatttagtgggataaaacttggttgttg 39702232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 45419421 - 45419518
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||  |||| || | |||||||||| |||||||||  ||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  45419421 gagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 45419518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 32043592 - 32043752
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  ||| |||||||||| |||||  | ||| |||||||||| |||||||| ||||||  |||  || |||||||||  ||| ||||  ||    
T  32043592 ggtatcacctatagtacaaaagatggtagaaactagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcag 32043691  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||  |||||||||||||||| |   ||||||  | ||||||||| ||||||||||    
T  32043692 atggaggggtgtcaaatcactagaggtaggggaagacctaaaaaaactattagagaaacta 32043752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 9905126 - 9905076
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||    
T  9905126 ggcttaggtggtttggacatgtagagagaagacttgtagatgttgtagtaa 9905076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 24740054 - 24739968
Alignment:
Q  147 attttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||| ||||||| |||||||   || | ||||||||||||||||| ||||||| |||| |||  ||||||| ||||||||||||||    
T  24740054 attttatagtaacgagagtaggtgaggtagagggtagtcaaatcaccagaggcacatgacgacctagaaaaattataagagaaacta 24739968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 346
Target Start/End: Complemental strand, 30783301 - 30783042
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||| |||||||||||  ||||||||| |||||| | |||||| | ||||  |||| ||||||||||||  ||||     |||||||||| |||||    
T  30783301 gtagaaaa-atggtggaaac--ggcttaggttgtttgggcttgtagagaaaagacatgtagattttgtagtaaagagag-----tagatggaggatagtc 30783210  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    | ||||||||||||| | |||||   || ||||| ||||||||||||       ||||| |||| ||||| ||||| ||| |||||| | | ||| |||     
T  30783209 agatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataataa 30783110  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    || ||||||  |   |||||| ||| ||||||||| ||| |||||||||||||| ||  |||||||||    
T  30783109 aacattatgaggtagtttgatccatgtagccgaccccatctagtgggataaaacttgactgttgttgt 30783042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 35914783 - 35914721
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||| |||||| ||| |||||| || | ||||||| ||||||||||||||||||||||    
T  35914783 agatggaggatagtcagatccctagagacagaggaagacatagaaaaactataagagaaacta 35914721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 6483272 - 6483397
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||| |||||||||  |||||||||||||||| ||||||||  |||| |  | | ||||||||| ||   |||||||  || ||||||| ||      
T  6483272 gtagaaaagagggtggaaacttggcttaggtggtttgggcatgtagagggaagttccggagattttgtagcaagtcgagtagatcagctggagggcaggg 6483371  T
Q  186 aaatcactagaggcatatgaagacag 211  Q
    ||||||||||||||| | ||||||||    
T  6483372 aaatcactagaggcaaaggaagacag 6483397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 12611538 - 12611586
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttg 122  Q
    ||||||||||  ||||||||||||||||||||  |||||||||||||||    
T  12611538 gtagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttg 12611586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 4011182 - 4011245
Alignment:
Q  170 tagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| ||||||| ||||| |||||| || | ||||||  ||||||||||||||||||||||    
T  4011182 tagatggtgggtagttaaatcgctagagacagaggaagacctagaaaaactataagagaaacta 4011245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 11523798 - 11523723
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  11523798 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 27037804 - 27037859
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatgg 288  Q
    |||||||| | ||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  27037804 aagatataaagattaatgagttggatagaaatatggtatttgatagaatattatgg 27037859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 32569785 - 32569710
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||  | ||||||||  || ||||||||| ||||||||||||||| || |||||||||||||    
T  32569785 tatgatagaacactatgacgtcatttgatttatgtagccgaccccatttagtgggataagacttggttgttgttgt 32569710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 38689553 - 38689612
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgta 145  Q
    |||||||||||||| ||||| | ||||||||||||| ||||| |||| |||||| |||||    
T  38689553 gtagaaaagatggtagaaactcagcttaggtggttttgacatctagagagaagacttgta 38689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 39051160 - 39051271
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||  ||||| ||| |||||||||||||  ||||||| | |||   |||| |||||| ||| |  |||||| |  |||||||| |||||||||    
T  39051160 gaaaagatggcagaaactcggtttaggtggtttgggtatgtagagaaaagtcatgtagattttgcagtgaggagagtaaatcagatggagagtagtcaaa 39051259  T
Q  189 tcactagaggca 200  Q
    ||||||||||||    
T  39051260 tcactagaggca 39051271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 79131 - 79189
Alignment:
Q  175 ggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||||||||||||| ||| | |||| |  ||||| ||||||||||||||||    
T  79131 ggagggtagtcaaatcactagaagcagaggaaggcttagaaacactataagagaaacta 79189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 2518672 - 2518590
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtag 155  Q
    ||||||||||   |||||||||||||||||||   || ||||||||||||   ||||||| |||||| ||||| |||||||||    
T  2518672 ggtagcacctcaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttgtagattttgtag 2518590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 9969346 - 9969276
Alignment:
Q  129 tagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggc 199  Q
    |||| |||||||||||| ||| |||||||   |||||||| |||||||| | |||||||||| ||||||||    
T  9969346 tagacagaagatttgtagattctgtagtagagagagtagattagatggatgatagtcaaatcgctagaggc 9969276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 30748643 - 30748745
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| |||||||||||||||||| || ||| |||||| || |||||||| ||| |||| |||| || | || ||| ||| || | ||||||||    
T  30748643 attaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtagctgaccccactaagcgggttaagacttagttgttgt 30748742  T
Q  344 tgt 346  Q
    |||    
T  30748743 tgt 30748745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 35914686 - 35914600
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| | |||||||||| ||||||| |  ||||||| ||| |||| |||| || |||||| ||||| || ||||||||||||||    
T  35914686 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagtgagataagacttggttgttgttgta 35914600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 39946859 - 39946925
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  39946859 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaaga 39946925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 44373779 - 44373913
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  |||||||||||||||||||   |||||  ||||||||  ||||||||   ||||  | || ||||||||||||  ||||||||  | |    
T  44373779 gtagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttgagcatgtagagtaaagacctatagattttgtagtaaagagagtagatcaaa 44373878  T
Q  174 tggagggtagtcaaatcactagaggcatatgaaga 208  Q
    | |||| |||||| ||| || ||||||||||||||    
T  44373879 tagaggatagtcagatccctggaggcatatgaaga 44373913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 490532 - 490617
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| ||||||| |  ||||||| ||| ||||||||| || ||||||||||||  | || ||||||||||    
T  490532 aaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgt 490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 14742155 - 14742082
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  14742155 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 16971957 - 16971876
Alignment:
Q  150 ttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaac 231  Q
    |||||||||  |||||| | |||||| |||||||| ||||||||||| |||   ||| ||  ||||||||||||||||||||    
T  16971957 ttgtagtaaggagagtatattagatgaagggtagtgaaatcactagatgcacgggaaaacttagaaaaactataagagaaac 16971876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 18474239 - 18474174
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||||  ||||||| ||||||||||||  ||||||| |||||||  |||||||| ||||||    
T  18474239 gtagcacctatagtagaaatgatggtggaaactaggcttagttggtttgagcatgtagagagaaga 18474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 35643868 - 35643815
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||||||||||    ||||||||||||||| |||||||| ||||||    
T  35643868 gtagaaaagatggtggaaaatatgcttaggtggtttgggcatgtagagagaaga 35643815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 41031473 - 41031420
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| ||||||||||||| || ||||||||||||  | |||||||||||||    
T  41031473 atttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgt 41031420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 41031579 - 41031526
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| ||||||||||||| || ||||||||||||  | |||||||||||||    
T  41031579 atttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgt 41031526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 42584408 - 42584525
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaag 207  Q
    |||||||||||||||| |||||||| |||| |  |||| || ||||||||  |||||||||  ||||| ||| | |||| ||||  ||||| | || |||    
T  42584408 ggcttaggtggtttgggcatgtagagagaaaacctgtagatgttgtagtacgaagagtagatcagatgaaggtttgtcagatcaaaagaggtagataaag 42584507  T
Q  208 acagagaaaaactataag 225  Q
    ||  ||||||||||||||    
T  42584508 acctagaaaaactataag 42584525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 1928659 - 1928587
Alignment:
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| ||||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  1928659 gatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 9999281 - 9999333
Alignment:
Q  72 tggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttgga 124  Q
    ||||||||| ||  |||||||||||| || |||| ||||||||||||||||||    
T  9999281 tggtagcacttattgtagaaaagatgatgaaaactcggcttaggtggtttgga 9999333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 25473499 - 25473403
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||  |||| || | |||||||||| | ||| | | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  25473499 gagtttgatccaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 31104578 - 31104622
Alignment:
Q  242 aaattaacgagtttgatagaaatatgatatatgatagaatattat 286  Q
    ||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  31104578 aaattaacgagtttgatcgaaatatgatttatgataaaattttat 31104622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 35643785 - 35643729
Alignment:
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaa 230  Q
    |||||| |||||| || |||||||||| | ||||||  |||||||||||||||||||    
T  35643785 tggaggatagtcagattactagaggcagaggaagacctagaaaaactataagagaaa 35643729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 39953316 - 39953264
Alignment:
Q  294 tttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| ||| ||||||||| || |||||||||||| || |||||||||||||    
T  39953316 tttgattcatgtagccgaccccacttagtgggataagacttggttgttgttgt 39953264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 43732571 - 43732678
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| |||||  | ||||||||||||| ||||||| | ||||||  |||  ||||||||  ||  ||||||||  | |||||||| ||||    
T  43732571 gtagaaaagatggtagaaacaagacttaggtggtttgcacatgtaaaaagaagacatgtggattttgta-aaaggagagtagatcacatggagggcagtc 43732669  T
Q  186 aaatcacta 194  Q
    |||||||||    
T  43732670 aaatcacta 43732678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 44529432 - 44529508
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | |||||   |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  44529432 tatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 44529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 329
Target Start/End: Complemental strand, 28628212 - 28627950
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||| ||||||| |||||||||||   |||||||||||||||| |||||| | |||| |  |||| ||| ||||||||  ||||||||   ||    
T  28628212 gtagcacctagagtagaaatgatggtggaaaattggcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccga 28628113  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    |||||| |||||||||||| ||||| | | ||||||  |||||||||||||||||||||       ||||| |||| ||||| ||||| |||  |||| |    
T  28628112 tggaggatagtcaaatcacaagaggtagaggaagacctagaaaaactataagagaaactattaggaaagatttagagattaatgagttggatgcaaatgt 28628013  T
Q  267 gatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    | | |||||||||| ||||||| |  ||||||| ||| ||||||||  || ||||||||||||    
T  28628012 ggtttatgatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataa 28627950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 47848676 - 47848836
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||| ||||  |||||||||||||||||||   |||||||||||||||| ||||| || |||||| ||||||||| |||| |||  ||||||||  ||    
T  47848676 ggtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcag 47848775  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||  ||||||||||||| | |||||   ||||||||||||||||||||||    
T  47848776 atggaggatagtctgatcactagaggcagaggaagaactagaaaaactataagagaaacta 47848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 326
Target Start/End: Complemental strand, 38135476 - 38135233
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||||||||   ||||||||||||||||||||||||| ||||||   ||| ||||||||||||  ||| ||||  ||||||||| |||||| |    
T  38135476 gaaaagatggtggaaaataggcttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggaga-tagatcagatggaggatagtcaga 38135378  T
Q  189 tcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaat 281  Q
    ||| |||||||| ||||||||  ||||||| |||||||||||||       ||||| |||| ||||| ||||| ||  ||||||||   |||||||||||    
T  38135377 tcattagaggcagatgaagacctagaaaaagtataagagaaactattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaat 38135278  T
Q  282 attatggtgacatttgatgcatatagccgacctcatttagtggga 326  Q
    ||||||| |  ||||||| ||| |||| |||| || || ||||||    
T  38135277 attatggcgtaatttgatccatctagctgaccccacttggtggga 38135233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 1740803 - 1740927
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||| |||  |||||||| |||||||||||  ||||||||||||||||  |||||||||| ||| ||||  ||||||||||||  ||||||||  ||    
T  1740803 ggtagcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcag 1740902  T
Q  173 atggagggtagtcaaatcactagag 197  Q
    |||||||||||||||||||||||||    
T  1740903 atggagggtagtcaaatcactagag 1740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 19262713 - 19262587
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| |||||  |||||||||||||||  |||||||| ||||||  |||| |||| ||||||| |||||||||  ||    
T  19262713 ggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagattt-gtagtaagaagagtagatcag 19262615  T
Q  173 atggagggtagtcaaatcactagaggca 200  Q
    |||||| |||||||||||||||||||||    
T  19262614 atggagtgtagtcaaatcactagaggca 19262587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 28020966 - 28021073
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||| || |||||||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||  || |||| |||  |||||||| |||    
T  28020966 ggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaagatttgtaggttctgtaataaggagagtagattag 28021065  T
Q  173 atggaggg 180  Q
    ||||||||    
T  28021066 atggaggg 28021073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 25579342 - 25579208
Alignment:
Q  88 agaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaa 187  Q
    |||||| ||||||||||   ||||||||||||||||  ||||||| ||||||  |||| ||| ||| |||| ||||||||| |||||||||| |||||||    
T  25579342 agaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaa 25579243  T
Q  188 atcactagaggcatatgaagacagagaaaaactat 222  Q
    ||||| ||||  | ||||||||  |||||||||||    
T  25579242 atcacaagagttaaatgaagacctagaaaaactat 25579208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 346
Target Start/End: Original strand, 41483656 - 41483769
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||||||||||||||| |||| | |||||||||||| |||||  |||||||| ||| |||| ||| ||||||||| || |||||||||||| |     
T  41483656 aagatctagaaattaacgagttggatatagatatgatatatggtagaactttatggtgtcatatgatccatgtagccgaccccacttagtgggataagat 41483755  T
Q  333 gtggttgttgttgt 346  Q
     |||||||||||||    
T  41483756 ttggttgttgttgt 41483769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 30144793 - 30144901
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||||||||| |||| ||||||||||| |||||| || ||||| |||||| ||||| ||| | |||||  |||||||||  ||||||||||| ||||||    
T  30144793 gaaaagatggtagaaatccggcttaggtagtttgggcaggtagagagaagacttgtagattctatagtacgaagagtagatcagatggagggtggtcaaa 30144892  T
Q  189 tcactagag 197  Q
    |||||||||    
T  30144893 tcactagag 30144901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 6420747 - 6420610
Alignment:
Q  96 tggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactag 195  Q
    ||||||||||  |||||||||||||||| |||||||| |||||| ||||| ||  ||||||||  ||||||||  ||||| | | |||||| ||||||||    
T  6420747 tggtggaaactaggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatgaatgatagtcagatcactag 6420648  T
Q  196 aggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||| | | ||||  | ||||||||||||||| ||||    
T  6420647 aggcagaggtagacctataaaaactataagagatacta 6420610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 12966025 - 12966178
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    ||||||||||  | ||||||||||||||||||   ||||||||||||||| |||||||| ||||||   ||||||| ||||||||  ||||||||  |      
T  12966025 gtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacccgtaaattctgtagtaaggagagtagatcaag 12966124  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    || ||  |||||||||||||||||      ||||||  ||||||||||||||||||||||    
T  12966125 tgaagactagtcaaatcactagag------gaagacctagaaaaactataagagaaacta 12966178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 39811962 - 39812084
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatg 175  Q
    |||||||| | ||||||| |||||| |||| |||||||||| |||||| |||||||| ||||||  |||| ||| | ||||||  ||||||||  |||||    
T  39811962 agcacctatcatagaaaaaatggtgaaaactcggcttaggtagtttgggcatgtagagagaagagatgtagattctatagtaaggagagtagatcagatg 39812061  T
Q  176 gagggtagtcaaatcactagagg 198  Q
    ||||  || ||||||||||||||    
T  39812062 gaggaaagccaaatcactagagg 39812084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 346
Target Start/End: Complemental strand, 40008682 - 40008431
Alignment:
Q  88 agaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaa 187  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||| | || |  | |  ||||||| | ||  |||||||| |||||||||| |||| ||    
T  40008682 agaaaagatggtggaaactcggattaggtggtttgggcatgtagagataa-acctattgattttgttgaaaggagagtagattagatggaggatagttaa 40008584  T
Q  188 atcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatg 287  Q
    |||| |||||| | | ||||||  | ||| |||| |||||||| |    |||||  ||||| ||||| |||||| | |||||||||||||||| ||||||    
T  40008583 atcattagaggtagaggaagacttaaaaacactacaagagaaatt----tatag--attaatgagttggatagagacatgatatatgatagaacattatg 40008490  T
Q  288 gtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
      |   |||||| ||| |||| ||||||| ||| || ||||| || |||||||||||||    
T  40008489 tcgttgtttgatccatgtagctgacctcacttaatgagataagacttggttgttgttgt 40008431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 347
Target Start/End: Complemental strand, 40139061 - 40138947
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||| | ||||||||||||||||| ||||||||||||||||||  | |||||||| ||| |||| |||| || |||||| ||||| ||    
T  40139061 aagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttgatccatgtagcagaccccacttagtgcgataagac 40138962  T
Q  333 gtggttgttgttgta 347  Q
     ||| |||| |||||    
T  40138961 ttggctgttattgta 40138947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 26742176 - 26742027
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||||||||   || |||||||||||| ||||||||| | | ||  | || ||||||| ||||  ||||||||  ||    
T  26742176 ggtagcacctatagtagaaaagatggtggaaaataggattaggtggtttgaacatgtagagaaacgacctatagattttgtggtaaggagagtagatcag 26742077  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactat 222  Q
    || |||  |||||| ||||||||||||| | ||||||  |||||||||||    
T  26742076 atagagaatagtcagatcactagaggcagaggaagacgtagaaaaactat 26742027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 36514487 - 36514362
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| |||||  | |||||||||||||| |||||||| ||| || ||||  ||| |||||||   ||||||||  ||    
T  36514487 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagacgacttgtggattctgtagtatggagagtagatcag 36514388  T
Q  173 atggagggtagtcaaatcactagagg 198  Q
    || ||||| |||||| ||||||||||    
T  36514387 atagaggggagtcaagtcactagagg 36514362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 228
Target Start/End: Complemental strand, 48202960 - 48202827
Alignment:
Q  95 atggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcacta 194  Q
    ||||||||| |  |||||||||||||||  |||||||| |||||| ||||| ||| ||||||||  ||||||||  | |||| || ||||||||||| ||    
T  48202960 atggtggaatctaggcttaggtggtttgcgcatgtagagagaagacttgtagattctgtagtaaggagagtagatcatatggtggatagtcaaatcatta 48202861  T
Q  195 gaggcatatgaagacagagaaaaactataagaga 228  Q
     ||||| | |||| |  |||||||||||||||||    
T  48202860 taggcagaggaaggcctagaaaaactataagaga 48202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 35713713 - 35713821
Alignment:
Q  89 gaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaa 188  Q
    ||||| ||||||||||   |||||||||||||||| |||||||| |||||| ||||| ||||||||||||  ||||||||   |||| |||||||| | |    
T  35713713 gaaaaaatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggagagtagatctgatgaagggtagttata 35713812  T
Q  189 tcactagag 197  Q
    ||| |||||    
T  35713813 tcattagag 35713821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 21078124 - 21078199
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| ||||||| | |||||||| ||| |||||||| ||||||||||||||||  | |||||||||||||    
T  21078124 tatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttggttgttgttgt 21078199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 43282410 - 43282571
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||  |||||||||  ||||||||||  |||| |||||||| |||||| ||| | ||| ||||| ||  |||||||| |||    
T  43282410 ggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgggcatgtagagagaagacttgcagattctgtaggaaggagagtaga-tag 43282508  T
Q  173 atggagggtagtcaaatcactagag--gcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||| ||||| ||||  | | | || |||  ||||||||||||||||||||||    
T  43282509 atggaggatagtcagatcacaagaggtgtagaggatgacctagaaaaactataagagaaacta 43282571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 198
Target Start/End: Original strand, 5335922 - 5336047
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||| |||  |||| ||||||||| |||||  | |||||||||||||| ||| |||| ||||||  |||  ||| |||||| |  |||||||| |||    
T  5335922 ggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattag 5336021  T
Q  173 atggagggtagtcaaatcactagagg 198  Q
    |||||||| |||||||||||| ||||    
T  5336022 atggaggggagtcaaatcactcgagg 5336047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 9797949 - 9797862
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactag 195  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| |||||  || ||| |   ||||| | ||||||||||||||||    
T  9797949 ggcttaggtggtttggacatgtagagagaagacttgtagattttgaagtaaggagcgtatatatgatggggagtagtcaaatcactag 9797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 37618152 - 37618227
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||||| |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  37618152 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 37618227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 38920796 - 38920855
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    |||||||||||  ||||||||||||||||||||  |||||| ||||||||| ||||||||    
T  38920796 ggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtaga 38920855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 27021972 - 27021906
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| ||||| ||||  |||||||||||||||| |||||||| ||||||    
T  27021972 ggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 27893828 - 27893707
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  |||||| ||||||||||||   ||||||||||||||| |||||||||   ||||| |||| |||||||| | |  ||||||||  ||    
T  27893828 ggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttgaacatgtaga---aagatctgtagattttgtacttaggagagtagatcag 27893732  T
Q  173 atggagggtagtcaaatcactagag 197  Q
    ||||||| || ||| ||||||||||    
T  27893731 atggaggatattcagatcactagag 27893707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 36245586 - 36245524
Alignment:
Q  171 agatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||||||| |||||||||| || | ||||||  | ||||||||||||||||||||    
T  36245586 agatggagggtagtcacatcactagagacagaggaagacctataaaaactataagagaaacta 36245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 45601645 - 45601755
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaac 332  Q
    ||||| |||| ||||| ||||| |||  ||||||||| |||||||||| | |||||||  ||||||| ||| |||| || |||| ||||||||||||  |    
T  45601645 aagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctgaactcacttagtgggataaggc 45601744  T
Q  333 gtggttgttgt 343  Q
     ||||||||||    
T  45601745 ttggttgttgt 45601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 2885807 - 2885722
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | |||||||  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  2885807 aaatatggtttatgatagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 24598272 - 24598188
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||| | |||||||||||| |||   |||||||| ||| |||||||| ||||||| |||||||| || |||||||||||||    
T  24598272 aaatatgatttttgatagaatattttggcatcatttgatccatgtagccgac-tcatttaatgggataagacttggttgttgttgt 24598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 28208413 - 28208328
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  28208413 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 30814851 - 30814791
Alignment:
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| |||||| ||||||||||||| | ||||||  ||||| ||||||||||||||||    
T  30814851 atggaggatagtcagatcactagaggcagaggaagacctagaaacactataagagaaacta 30814791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 41948532 - 41948584
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||||||||||  |||||| ||||||||| |||||||| ||||||    
T  41948532 tagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagaaga 41948584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 11594167 - 11594242
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  11594167 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11594242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 12841350 - 12841275
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  12841350 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12841275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 279
Target Start/End: Complemental strand, 30200243 - 30200031
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||| ||||||  ||||||||||||||||||||  |||||||||| ||| | |||||| ||||||||  |  | ||| ||||||||  |||  | |  ||    
T  30200243 ggtaacacctatagtagaaaagatggtggaaactaggcttaggtgattttggcatgtaaatagaagacctcgagattatgtagtaaggagatcatatcag 30200144  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaata 265  Q
    |||||| ||||||||| |||| ||| || | ||||||| | ||||||||||| | || ||       ||||| |||| ||||| |||||||||| |||||    
T  30200143 atggagagtagtcaaaacact-gagacagaggaagacataaaaaaactataaaaaaatcttttaagaaagatctagagattaatgagtttgatataaata 30200045  T
Q  266 tgatatatgataga 279  Q
    || |||||||||||    
T  30200044 tggtatatgataga 30200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 31682677 - 31682602
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  31682677 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31682602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 39906447 - 39906372
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  39906447 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 40169651 - 40169710
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtaga 132  Q
    |||||||| ||  |||||||||||||||||||   |||||||||||||||| ||||||||    
T  40169651 ggtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtaga 40169710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 42187472 - 42187567
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    |||||||||||   ||||||||||||||||||   |||||||||||||||| |||||| | |||||   |||| ||| ||||||||  ||||||||    
T  42187472 ggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtaga 42187567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 7220750 - 7220812
Alignment:
Q  77 gcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||  |||||||||||| | |||||  |||||||||||||||| |||||||| ||||||    
T  7220750 gcacctattgtagaaaagatgatagaaacttggcttaggtggtttgggcatgtagagagaaga 7220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 23087346 - 23087300
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgtagta 157  Q
    ||||||| |||||||||||||| |||| ||||||||||| |||||||    
T  23087346 ttaggtgatttggacatgtagagagaaaatttgtaaattatgtagta 23087300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 313
Target Start/End: Original strand, 28858050 - 28858294
Alignment:
Q  77 gcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagact-agatg 175  Q
    |||||||  |||||||| ||||| ||||| |   ||||||||||||| |||||||| ||| ||  |||  ||| | |||||| ||||||||| | |||||    
T  28858050 gcacctattgtagaaaacatggtagaaactcaagttaggtggtttgggcatgtagaaagatgacctgtggattctatagtaagaagagtagattcagatg 28858149  T
Q  176 gagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatga 268  Q
    |||  | |||||||||||| || || |  |||||  ||||||||||||||| |||||       ||||| |||| |||||  |||| |||||||||||      
T  28858150 gagcattgtcaaatcactatagacaaagtaagacttagaaaaactataagacaaactattaagaaagatctagagattaataagttggatagaaatattt 28858249  T
Q  269 tatatgatagaatattatggtgacatttgatgcatatagccgacc 313  Q
    ||||||||||||  ||||| |  ||||||||  || |||||||||    
T  28858250 tatatgatagaacgttatgatctcatttgatcaatgtagccgacc 28858294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 30632970 - 30633071
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||| | || |||| ||||||||| | |||||||| |||||||| |||||||| |||||   |||  ||| ||||||||  |||||||| |||    
T  30632970 ggtagcacctatcataaaaaaaatggtggaagctcggcttagatggtttgggcatgtagagagaag---tgtggattctgtagtaaggagagtagattag 30633066  T
Q  173 atgga 177  Q
    |||||    
T  30633067 atgga 30633071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 40980013 - 40979927
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| | |||||||||| | ||||| |  ||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  40980013 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 40979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 43281676 - 43281742
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  43281676 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 43281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 45836760 - 45836694
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  45836760 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 45836694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 22349825 - 22349902
Alignment:
Q  269 tatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||||||| ||||| | |||||||| ||| ||| ||||| || ||||||||||||  | || ||||||||||    
T  22349825 tatatgatagaatactatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttgt 22349902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 32368518 - 32368461
Alignment:
Q  172 gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaa 229  Q
    |||| |||||||||||||||||||||||| | |||||   |||||| |||||||||||    
T  32368518 gatgaagggtagtcaaatcactagaggcaaaggaagatctagaaaatctataagagaa 32368461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 36102045 - 36101900
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||   ||||||||||| ||||||   ||||||||||||||||  ||||||| ||||||  | || ||||||||  |   ||||||||  |     
T  36102045 ggtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacctatagattttgtaacagggagagtagatcat 36101946  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaa 218  Q
    ||||||  |||||| ||||||||||||| | ||||||  |||||||    
T  36101945 atggagaatagtcagatcactagaggcagaggaagacctagaaaaa 36101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 43491505 - 43491590
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||| |||||||||| | |||| ||  |||| || ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  43491505 aaatatgatttatgatagaacactatgatgtaatttcatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43491590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 45836567 - 45836482
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  |  ||||||||||||    
T  45836567 aaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgt 45836482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 1011256 - 1011328
Alignment:
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| |||||||||  |||||||  || ||||||||| || ||||||||||||  | |||||||||||||    
T  1011256 gatagaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 6375075 - 6375147
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||    
T  6375075 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 6375147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 24549955 - 24549907
Alignment:
Q  91 aaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||| |||||||  |||||||||||||||| |||||||| ||||||    
T  24549955 aaagatgatggaaactaggcttaggtggtttgggcatgtagagagaaga 24549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 29650570 - 29650666
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||  ||||||| | | |||||||| | || || | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  29650570 gagtttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 34869627 - 34869703
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||| | |||||||| ||| |||||||||  | ||||||||||||  | ||||||||||||||    
T  34869627 tatgatagaacactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttggttgttgttgta 34869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 36136766 - 36136926
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| ||||   | ||||||| |||||| ||| |||| |||| |  | || || ||||||||  ||||| |||  ||    
T  36136766 ggtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacctatagatgttgtagtacgaagagcagatcag 36136865  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||  ||||| ||||  ||| | | | ||||||  ||||||||||||||||||||||    
T  36136866 atggaggagagtcagatcagaagaagtagaggaagacctagaaaaactataagagaaacta 36136926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 40139186 - 40139114
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    |||||||| |||||||||||  |||||||||| | ||| |||||||  |||||||||||| ||| | ||||||    
T  40139186 gtagaaaatatggtggaaactgggcttaggtgatctgggcatgtagggagaagatttgtagattatttagtaa 40139114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 99 - 329
Target Start/End: Complemental strand, 26784594 - 26784357
Alignment:
Q  99 tggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagagg 198  Q
    |||||||  ||||||||| |||||  ||| |||| ||||||| |||  ||||||||||||  || |||||  ||||||||||||||||||||||||||||    
T  26784594 tggaaactaggcttaggttgtttgtgcatttagagagaagatatgtggattttgtagtaaggagggtagataagatggagggtagtcaaatcactagagg 26784495  T
Q  199 catatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtga 291  Q
    || |  |||||  |||||||||||||||||||||       |||||||||| ||||| |||||  ||||||||||| ||||||||| || ||| ||||      
T  26784494 cagagaaagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgaatagaaatatggtatatgataaaacattttggttt 26784395  T
Q  292 catttgatgcatatagccgacctcatttagtgggataa 329  Q
     ||||||| ||| ||||| | |||| ||||| ||||||    
T  26784394 aatttgatccatgtagccaatctcacttagtaggataa 26784357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 90 - 345
Target Start/End: Complemental strand, 37481880 - 37481618
Alignment:
Q  90 aaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaat 189  Q
    |||||||||| ||| |  |||||||||||||||  |||||||| |||||| |||| ||||||||||| |  ||||||||  |||||||||| ||| | ||    
T  37481880 aaaagatggttgaacctaggcttaggtggtttgagcatgtagagagaagacttgtgaattttgtagttaggagagtagatcagatggaggggagttagat 37481781  T
Q  190 cactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatagaata 282  Q
    |||| |||| | ||||||||  ||||||||||| |||||||||       ||||| |||  || || ||||| |||| ||||||| ||| |||||||| |    
T  37481780 cactggaggtagatgaagaccaagaaaaactattagagaaactattaagaaagatctagcgataaatgagttggataaaaatatggtatttgatagaaaa 37481681  T
Q  283 ttatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttg 345  Q
    |||||||| | |||||| ||| ||| ||||| ||  |||| ||||||  ||||||||||||||    
T  37481680 ttatggtgtcttttgattcatctagtcgaccccacgtagtcggataaggcgtggttgttgttg 37481618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 1456232 - 1456379
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||| | ||||||||||||||||||| |||||||||| |||||||| |||||| | ||||| | || |||||| ||||| ||||||| || ||    
T  1456232 ggtagcacctatcctagaaaagatggtggaaactcggcttaggtagtttggacgtgtagagataagatctctagattttgaagtaagaagagtaaacaag 1456331  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaact 220  Q
    ||| || | ||||||||||||| ||| | ||||||||  |||||||||    
T  1456332 atgaagagaagtcaaatcactaaaggtagatgaagacctagaaaaact 1456379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 12026264 - 12026081
Alignment:
Q  94 gatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcact 193  Q
    ||||||||||||  |||||||||||||||  |||||||| ||||||  |||| |||||||| |||  ||||||||  |||||| ||||||||| ||||||    
T  12026264 gatggtggaaactaggcttaggtggtttgaccatgtagagagaagacctgtagattttgtactaaggagagtagatcagatggtgggtagtcacatcact 12026165  T
Q  194 agaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgata 270  Q
     |||||  || |||||  ||| |||||||| ||||||||       ||||| |||| ||||| |||||||||||||||||||||    
T  12026164 ggaggcggattaagacctagagaaactataggagaaactattaagaaagatctagagattaatgagtttgatagaaatatgata 12026081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 43752227 - 43752067
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||| |||| ||||   |||||||||| |||||||||||||| ||||||  | || ||| |||||||   ||||||||  ||    
T  43752227 ggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggagagtagatcag 43752128  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||| || ||| |||||| |||||||| ||||||  ||||||||||| ||||||||||    
T  43752127 atggaggatactcagatcactggaggcataggaagacctagaaaaactatcagagaaacta 43752067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 8197643 - 8197541
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| | | |||||| ||| |||||||||  | ||||||||||||  | ||||||||||    
T  8197643 attaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttggttgttgt 8197544  T
Q  344 tgt 346  Q
    |||    
T  8197543 tgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 8202403 - 8202301
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| | | |||||| ||| |||||||||  | ||||||||||||  | ||||||||||    
T  8202403 attaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttggttgttgt 8202304  T
Q  344 tgt 346  Q
    |||    
T  8202303 tgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 23714541 - 23714384
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||| ||  ||||||||||||||||||||  | |||| || |||| | |||||||| |||||| ||||  ||| ||||||||  ||||||||  |     
T  23714541 ggtagcacatatagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaa 23714442  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaa 230  Q
    |||| ||| ||||||||||||||| | | ||||||||  |||||||||||||||||||    
T  23714441 atggtggggagtcaaatcactagacgtagatgaagacttagaaaaactataagagaaa 23714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 24102213 - 24102056
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||| ||  ||||||||||||||||||||  | |||| || |||| | |||||||| |||||| ||||  ||| ||||||||  ||||||||  |     
T  24102213 ggtagcacatatagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaa 24102114  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaa 230  Q
    |||| ||| ||||||||||||||| | | ||||||||  |||||||||||||||||||    
T  24102113 atggtggggagtcaaatcactagacgtagatgaagacttagaaaaactataagagaaa 24102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 12141546 - 12141706
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||||||||   |||||||||||||||| || ||||| ||||||  |||| ||| | ||||||  ||||||||  ||    
T  12141546 ggtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagagtagatcag 12141645  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    || |||| ||||||||| || ||||| | | ||||||  |||||| ||||| |||||||||    
T  12141646 attgaggatagtcaaattacaagaggtagaggaagacctagaaaagctataggagaaacta 12141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 342
Target Start/End: Original strand, 33504313 - 33504502
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatataga-aattaacgag 252  Q
    ||||||||  |||||||||||||||| ||||||||||||| |  || ||  |||||||||||||||||||||       ||||| |||| | ||||  ||    
T  33504313 agagtagatcagatggagggtagtcagatcactagaggcagagaaaaacctagaaaaactataagagaaactattaagaaagatctagagatttaataag 33504412  T
Q  253 tttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttg 342  Q
    || ||| |||||||| |||||||||||| ||||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||    
T  33504413 ttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccacttagtgggataaggcttggttgttg 33504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 346
Target Start/End: Original strand, 38434953 - 38435234
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttagg-tggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagacta 171  Q
    |||||||||||  ||||||||||||||||||||  | ||| || |||||||| |||||| | |||||| ||||| ||  | ||||||  ||||||||  |    
T  38434953 ggtagcacctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagagaagacttgtagatgctttagtaaggagagtagatca 38435052  T
Q  172 gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaat 264  Q
     ||||||| |||||| ||||||||||||| | | ||||  |||||||||| ||||||||||       ||||| |||| ||||| | ||| ||| |||||    
T  38435053 tatggaggatagtcagatcactagaggcagaggtagacctagaaaaactacaagagaaactattaagaaagatctagagattaatgtgttggatcgaaat 38435152  T
Q  265 atgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
     || | |||||| ||| ||||||| |  ||||||| ||| ||||||| | || ||||||| ||||  | |||||||||||||    
T  38435153 ttggtttatgattgaacattatggcgtaatttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttgt 38435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 42092533 - 42092679
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||| |||||   | ||||||| | ||| |||||||| |||||  ||||| ||||||||||||  |||||||| |||||||||||||||||    
T  42092533 tagaaaagatggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagggtagtca 42092632  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    | |||||| ||  | | | ||||  |||||||||||| |||||||||    
T  42092633 attcactatagagacaggtagacctagaaaaactataggagaaacta 42092679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 18958909 - 18959073
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttgga----catgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    |||||||||||  |||||||||||||||||||   ||||||||||||||||     |||| ||| ||||||  || |  |||||||||||  ||||||||    
T  18958909 ggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagacctgcagcttttgtagtaaggagagtaga 18959008  T
Q  169 ctagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
      ||||||||| |||||| ||||  ||||||| | ||||||  |||||||||| |||||||||||    
T  18959009 tcagatggaggatagtcagatcatcagaggcagaggaagacctagaaaaactacaagagaaacta 18959073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 36869900 - 36870021
Alignment:
Q  112 taggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacag 211  Q
    |||||||||||||| |||||| || |||| ||||  || || |||||  |||||| | |||||||||| ||| ||| |||||||||||||| |||||       
T  36869900 taggtggtttggacgtgtagagaggagatctgtag-ttatgcagtaaggagagtaaattagatggaggatagacaattcactagaggcataggaagagct 36869998  T
Q  212 agaaaaactataagagaaactaa 234  Q
    |||||||||||||||||||||||    
T  36869999 agaaaaactataagagaaactaa 36870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 346
Target Start/End: Complemental strand, 9556635 - 9556369
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||| ||||||||||   |||||||||||||| | |||||||| ||||||   ||| ||| |||||||| || |||| |  ||||||||| |||||    
T  9556635 gtagaaaa-atggtggaaaataggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggatagtc 9556537  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    |||  |||||||||| | ||||||   |||||||||||||| |||||       ||||| |||  ||||| ||||| |||  | ||||| | ||||||||    
T  9556536 aaactactagaggcaaaggaagaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatag 9556437  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    || |||| ||||  ||||||| ||| ||||||||  || |||||||||| |  | |||||||||||||    
T  9556436 aacattagggtgtaatttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttgt 9556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 3481161 - 3481256
Alignment:
Q  91 aaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    |||||||||||||| | ||||||||||||||||||||||||| ||||||  | || ||| ||||| ||  ||||||||  ||||||||| ||||||    
T  3481161 aaagatggtggaaaacaggcttaggtggtttggacatgtagagagaagacctatagattctgtagcaaggagagtagatcagatggaggatagtca 3481256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 19235186 - 19235104
Alignment:
Q  151 tgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||  ||||||||  |||||||||| ||||||||||||||||  | | ||||||  ||||||||||||||||||||||    
T  19235186 tgtagtaaagagagtagatcagatggaggggagtcaaatcactagagatagaggaagacctagaaaaactataagagaaacta 19235104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 4598842 - 4598757
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    |||||||||||  |||| ||||||||| |||||  | ||| |||||||||||||| |||| |||||| |||| |||||||||||||    
T  4598842 ggtagcacctatagtagtaaagatggtagaaactagactttggtggtttggacatatagaaagaagacttgtgaattttgtagtaa 4598757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 11017316 - 11017433
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||| |||||||| ||||||| |||||||||  |||| || ||||||   ||| |||||||||| | ||| |||||  |     
T  11017316 ggtagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagacccgtagattttgtagttagaagggtagatcaa 11017415  T
Q  173 atggagggtagtcaaatc 190  Q
    ||||||||| ||||||||    
T  11017416 atggagggttgtcaaatc 11017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 13241011 - 13240930
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    |||||||||||||||||||  |||||||||||||||| |||||||| ||||||  |||| ||| | ||||||  ||||||||    
T  13241011 tagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagagaagacatgtagattctttagtaaggagagtaga 13240930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 14197430 - 14197288
Alignment:
Q  86 gtagaaaagatggtggaaacccggctt-aggtggtttggacatgtagatagaagatttgtaaattttgta----gtaacaagagtagactagatggaggg 180  Q
    ||||||||||||||||||||  ||||| ||||||||||| ||||||||  ||||| ||||| ||| | ||    ||||  |||||||   |||||||| |    
T  14197430 gtagaaaagatggtggaaactaggctttaggtggtttgggcatgtagagtgaagacttgtagattctctaactagtaaggagagtaggtcagatggagag 14197331  T
Q  181 tagtcaaatcactagaggcatatgaagacagagaaaaactata 223  Q
    |||||||||||||||||||| | ||||||   |||||||||||    
T  14197330 tagtcaaatcactagaggcaaaggaagacttggaaaaactata 14197288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 290
Target Start/End: Complemental strand, 37470352 - 37470189
Alignment:
Q  134 agaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| ||||| ||| |||| |||  |||||||| |||||||| |||||||| |||||||| || | | ||||||    ||||||||||||||||||||    
T  37470352 agaagacttgtagattatgtattaaggagagtagattagatggaaggtagtcagatcactagtggtagaggaagacctgaaaaaactataagagaaacta 37470253  T
Q  234 -------agatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtg 290  Q
           |||| |||| ||||| ||||| ||| ||||||||  ||||||||||| |||||||||    
T  37470252 ttaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtg 37470189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 41858746 - 41858799
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||    
T  41858746 gtagaaaagatggtggaaactgggcttagatggtttggacatgtagagagaaga 41858799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 43260441 - 43260529
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactaga 196  Q
    |||||||||||||||| |||||  | | |||| ||||| ||| | ||||||  ||||||||  ||||||||||||||||||||||||||    
T  43260441 ggcttaggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatggagggtagtcaaatcactaga 43260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 346
Target Start/End: Original strand, 11412723 - 11412992
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||| ||||||||||   ||||||||| |||||| ||| |||| | ||||  |||| ||| |||||||   ||||||||  ||    
T  11412723 ggtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcatttagagataagaactgtagattctgtagta--gagagtagatcag 11412820  T
Q  173 atgga-gggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaactaagatatagaaattaacgagtttgatagaaatatgatat 271  Q
    ||||| ||||||||| |||||||||| || | ||| ||  ||||||||||| || ||    ||||| |||| ||||| ||||| |||  ||||||| | |    
T  11412821 atggaggggtagtcagatcactagagccagaggaaaacctagaaaaactattag-ga----aagat-tagagattaatgagttggatccaaatatggttt 11412914  T
Q  272 atga---tagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||   ||||| |||||||||  ||||||| ||| ||||||| |||| ||||| ||||||  | |||||||||||||    
T  11412915 atgatagtagaacattatggtgtaatttgatccatgtagccgaactcacttagtaggataaggcttggttgttgttgt 11412992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 19855654 - 19855745
Alignment:
Q  256 gatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||| ||| |||||||||||  ||||||| | ||||  || ||| ||||||||| || ||||| ||||||| ||||||||||||||||    
T  19855654 gatagaaacatggtatatgatagagcattatggcgccattcaatccatgtagccgaccccacttagtaggataaagcgtggttgttgttgta 19855745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 9578946 - 9578888
Alignment:
Q  110 cttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||| |||  ||||||||    
T  9578946 cttaggtggtttggacatgtagagagaagacctgtaaattttgtattaagtagagtaga 9578888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 26850271 - 26850393
Alignment:
Q  107 cggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaa 206  Q
    |||||||||||||| || |||||||| ||||||  | || ||| ||||||||  ||| ||||  ||||||||| |||||||||||||| ||||| |  ||    
T  26850271 cggcttaggtggttcggccatgtagagagaagacctatatattatgtagtaaggagactagatcagatggaggatagtcaaatcactaaaggcagagaaa 26850370  T
Q  207 gacagagaaaaactataagagaa 229  Q
     ||  |||||| |||||||||||    
T  26850371 aacctagaaaatctataagagaa 26850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 3306046 - 3305965
Alignment:
Q  88 agaaaagatggtggaaacccggct-taggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||||||||||||||  | || |||||||||||| ||| |||| |||||| ||||||||| ||||||||  ||||||||    
T  3306046 agaaaagatggtggaaacttgactataggtggtttgggcatttagagagaagacttgtaaattatgtagtaaagagagtaga 3305965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 6218969 - 6219054
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    |||||||| ||  ||||||||||| ||||| |   ||||||||||||||||||||||||| || |||| |||| ||| ||||||||    
T  6218969 ggtagcacttatagtagaaaagatagtggataataggcttaggtggtttggacatgtagagaggagatatgtagattatgtagtaa 6219054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 9647876 - 9647775
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||| ||||||||||||  |  |||||||||||||||||||| | ||||||  |||| ||| | |||||  ||||||||   |||||||||||||||    
T  9647876 gtagaaatgatggtggaaactagctttaggtggtttggacatgtaaaaagaagacctgtagattctctagtattaagagtaggtcagatggagggtagtc 9647777  T
Q  186 aa 187  Q
    ||    
T  9647776 aa 9647775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 18188796 - 18188865
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagt 156  Q
    ||||||||||||||||| | || |||||||||||||| |||||| | ||||||| | || ||||||||||    
T  18188796 tagaaaagatggtggaagctcgacttaggtggtttgggcatgtaaagagaagatctatagattttgtagt 18188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 36183648 - 36183733
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||| |||| |||||||||| | ||||||| |||||||| ||| ||||||||| || ||||| ||||||  | |||||||||||||    
T  36183648 aaatttgatgtatgatagaacactatggtgccatttgatccatgtagccgaccccacttagtaggataaggcttggttgttgttgt 36183733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 12475002 - 12474926
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  12475002 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 38860268 - 38860340
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||  ||||||||||||||||||| |||||||||| | ||||||   ||||||  |||||||||||||    
T  38860268 agagtagatgagatggagggtagtcaaattactagaggcagacgaagacttggaaaaatgataagagaaacta 38860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 45077797 - 45077877
Alignment:
Q  113 aggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcact 193  Q
    ||||||||| | |||||||| |||| | ||||| ||||||||||||  ||||||||  ||||||||| |||||| ||||||    
T  45077797 aggtggttttggcatgtagagagaaaacttgtagattttgtagtaaggagagtagatcagatggaggatagtcagatcact 45077877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 227396 - 227471
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  227396 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 7431996 - 7431889
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggtt 338  Q
    |||| ||||| |||||  ||| ||||||| ||||| |||||  || |||||| |||||||| |||  | ||||||||| ||||||||||||| | | |||    
T  7431996 tagagattaatgagttgaataaaaatatggtatataatagatcataatggtgtcatttgatccatgcaaccgacctcacttagtgggataaagcttagtt 7431897  T
Q  339 gttgttgt 346  Q
    ||||||||    
T  7431896 gttgttgt 7431889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 9578741 - 9578698
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgta 154  Q
    |||||||||||||||||||| | ||||||| |||||||||||||    
T  9578741 ttaggtggtttggacatgtaaagagaagatctgtaaattttgta 9578698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 10516831 - 10516748
Alignment:
Q  264 tatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||| ||||||| |||||||||| |  ||||||| ||| |||| || |||| ||||||||||||  | ||||||||||||||    
T  10516831 tatgatttatgataaaatattatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttggttgttgttgta 10516748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 28508885 - 28508960
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  28508885 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 30306239 - 30306314
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  30306239 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 42543274 - 42543397
Alignment:
Q  110 cttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagac 209  Q
    |||||||||||||| |||||| | ||||||  |||  ||| |||||| |  ||||||||  | |||||||| ||||| ||||||||||| |   | ||||    
T  42543274 cttaggtggtttgggcatgtacagagaagacctgtggattctgtagttaggagagtagatcaaatggaggggagtcagatcactagaggtaggggtagac 42543373  T
Q  210 agagaaaaactataagagaaacta 233  Q
      ||||||||||||||||||||||    
T  42543374 ctagaaaaactataagagaaacta 42543397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 44437988 - 44437841
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| |||||  | | |||||||||| | |||||||| |||||| ||||  ||| |||| |||  ||  ||||  |||||||||| ||||    
T  44437988 gtagaaaagatggtagaaactagacataggtggtttcggcatgtagagagaagacttgtggattctgtaataaggagtatagatgagatggaggggagtc 44437889  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    | ||||||||||| |   | ||||  |||||||||||| |||||||||    
T  44437888 agatcactagaggtaggggtagacctagaaaaactatatgagaaacta 44437841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 13592540 - 13592418
Alignment:
Q  111 ttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagaca 210  Q
    |||||||||||||||||||| | |||| |  |||| || || |||||| |||||||||  | || |||| |||||| ||  | ||||| ||| ||||||     
T  13592540 ttaggtggtttggacatgtatagagaaaacatgtagatattatagtaagaagagtagatcaaatagaggatagtcatatttcaagaggtataggaagacc 13592441  T
Q  211 gagaaaaactataagagaaacta 233  Q
     |||| |||||||||||||||||    
T  13592440 tagaagaactataagagaaacta 13592418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 14255592 - 14255713
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  || |||| ||||| |||||| |  |||||||||||||    |||||| | |||||| ||| ||| ||||||||  ||| ||||| ||    
T  14255592 ggtagcacctattgtcgaaatgatgggggaaactcaccttaggtggtttgagtttgtagagacaagatt-gtagattatgtagtaaggagaatagaccag 14255690  T
Q  173 atggagggtagtcaaatcactag 195  Q
    ||||||||||| |||||||||||    
T  14255691 atggagggtagccaaatcactag 14255713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 25834683 - 25834749
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  25834683 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 25834749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 32402669 - 32402735
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgat 299  Q
    ||||| |||| ||||| ||||| |||||||||| | |||||||||||| ||||||||  ||||||||    
T  32402669 aagatctagagattaatgagttggatagaaataaggtatatgatagaacattatggtttcatttgat 32402735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 35704269 - 35704215
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| ||| |||||||| |||||||||||||||| || || |||||||||||    
T  35704269 atttgattcatgtagccgacatcatttagtgggataagacttgattgttgttgta 35704215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 36819392 - 36819457
Alignment:
Q  280 atattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||||| | |||||| ||||||||||||| || ||||||||||||| | ||||| |||||||    
T  36819392 atattatggtggcgtttgatccatatagccgacc-cacttagtgggataaagcttggttattgttgt 36819457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 3481331 - 3481436
Alignment:
Q  241 gaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgt 340  Q
    ||||||||| |||| || ||||||||| | |||||||||| ||||||| |  ||||||| ||| |||| |||| || ||||| ||| ||  | |||||||    
T  3481331 gaaattaacaagttggacagaaatatggtctatgatagaacattatggcgtaatttgatccatgtagctgaccccacttagttggaaaaggcttggttgt 3481430  T
Q  341 tgttgt 346  Q
    ||||||    
T  3481431 tgttgt 3481436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 3635396 - 3635323
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  3635396 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 9531685 - 9531600
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||| ||| ||||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  9531685 aaatatggtttatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 12734897 - 12734982
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | |||||||  ||||||| ||| ||| ||||| || ||||||||||||  | |||||||||||||    
T  12734897 aaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgt 12734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 18188861 - 18188914
Alignment:
Q  180 gtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||||||||||||||| | | ||||  ||||||| ||||||||||||||    
T  18188861 gtagtcaaatcactagaggcaaagggagacttagaaaaattataagagaaacta 18188914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 25834875 - 25834960
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | | ||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  25834875 aaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 41779575 - 41779522
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||| ||||||||||| || |||||||||||||  |||||||| ||||||    
T  41779575 gtagaaaaaatggtggaaactcgacttaggtggtttgatcatgtagagagaaga 41779522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 43573215 - 43573130
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||| |||||| |||  |||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  43573215 aaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 45367710 - 45367625
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||| | |||||||| | ||||  | |||||||| ||| | ||||||| || ||||||||||||||| || ||||||||||    
T  45367710 aaatatgatttttgatagaacactatgacgtcatttgatccatgtcgccgaccccacttagtgggataaaacttgtttgttgttgt 45367625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 4807805 - 4807877
Alignment:
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  4807805 gatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 13443993 - 13443925
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||| | ||| |||||| ||||||| | ||||||||  || ||||||||| |||||||||||||||    
T  13443993 aaatatggtttattatagaacattatggcgtcatttgatcgatgtagccgaccccatttagtgggataa 13443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 19863432 - 19863516
Alignment:
Q  262 aatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| | |||||||||| |||||||    ||||||| ||| |||||| || || ||||||||||||| | |||||||||||||    
T  19863432 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgt 19863516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 19867764 - 19867848
Alignment:
Q  262 aatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| | |||||||||| |||||||    ||||||| ||| |||||| || || ||||||||||||| | |||||||||||||    
T  19867764 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgt 19867848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Original strand, 19872665 - 19872749
Alignment:
Q  262 aatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| | |||||||||| |||||||    ||||||| ||| |||||| || || ||||||||||||| | |||||||||||||    
T  19872665 aatatggtttatgatagaacattatggcatgatttgatccatgtagccgtccccacttagtgggataaagcttggttgttgttgt 19872749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 32395599 - 32395651
Alignment:
Q  294 tttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| ||||||||| |||||||| |||||||   |||||||||||||    
T  32395599 tttgatgcatgtagccgaccccatttagttggataaagtttggttgttgttgt 32395651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 38452761 - 38452685
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| || | ||||||| |||| ||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  38452761 tatgataaaacactatggtgtcattcgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 31261206 - 31261062
Alignment:
Q  88 agaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaa 187  Q
    |||||||||| | ||||| | |||||| |||||||| ||||| || ||||||| |||| ||||||||||||   |||||||  ||||||||| |||||||    
T  31261206 agaaaagatgatagaaactcagcttagatggtttgggcatgttgagagaagatatgtagattttgtagtaatgtgagtagatcagatggagg-tagtcaa 31261108  T
Q  188 atcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    ||||||||||||| | ||||||  ||||||||||||||||||||||    
T  31261107 atcactagaggcagaggaagacctagaaaaactataagagaaacta 31261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 44443479 - 44443325
Alignment:
Q  78 cacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatgga 177  Q
    |||||| | ||||||||||||||||||| ||||||| || ||||| ||||||||| |||||| || || ||| ||||||||  |||||||   || ||||    
T  44443479 cacctaccatagaaaagatggtggaaactcggcttaagtagtttgcacatgtagagagaagacttttagattctgtagtaaggagagtagctcagttgga 44443380  T
Q  178 gggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    ||||||| |||||| || || ||||||||| |  |||||||||||||||||||||    
T  44443379 gggtagttaaatcattatagacatatgaaggcctagaaaaactataagagaaact 44443325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 231
Target Start/End: Complemental strand, 42510292 - 42510138
Alignment:
Q  75 tagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagat 174  Q
    |||||||||  ||||||||||| |||||||   |||||||||||||||||||||||||  |||||  | || ||||||| ||||  ||||||||  ||||    
T  42510292 tagcacctatagtagaaaagatagtggaaaataggcttaggtggtttggacatgtaga--gaagacctatagattttgtggtaaggagagtagatcagat 42510195  T
Q  175 ggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaac 231  Q
    ||||| |||||| ||||||||||||| | ||||||  ||||||||||| ||||||||    
T  42510194 ggaggatagtcagatcactagaggcaaaggaagacctagaaaaactatcagagaaac 42510138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 659541 - 659685
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    |||||||||| || |||||   ||||||||||||||| |||||||| |||| ||||||| ||| ||||||||  ||||| ||| ||| |||| ||||| |    
T  659541 tagaaaagatagtagaaacttagcttaggtggtttgggcatgtagagagaaaatttgtagattctgtagtaagcagagttgaccagagggagagtagtga 659640  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaac 231  Q
    |||||||||||||| | ||||||  ||||||||| ||||||||||    
T  659641 aatcactagaggcaaaggaagacctagaaaaactgtaagagaaac 659685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 11581460 - 11581606
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||| |||||  | ||||||||||||||  ||||||| ||||||  ||| |||| |||||||| ||||||| |  ||||| |||  |||||    
T  11581460 tagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagacatgtgaattatgtagtaagaagagtacatcagatgtaggtgagtca 11581559  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||| ||  ||||||  ||||||||||||||||||||||    
T  11581560 aatcactagaggtatgagaagacctagaaaaactataagagaaacta 11581606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 21200552 - 21200710
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||||  |||||||||||||||||||  | |||||||||||||| |||||||| ||||||  |||| ||| || |||||  ||||||||  |     
T  21200552 ggtagcacctag--tagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcac 21200649  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| |||||||||||||||| || | | ||||||  ||||||||||| ||| ||||||    
T  21200650 atggagagtagtcaaatcactagggggagaggaagacctagaaaaactattagacaaacta 21200710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 86 - 347
Target Start/End: Complemental strand, 42026803 - 42026535
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||| |||||||||  |||||||||||||||  | |||||| |||| | ||||| ||| | ||||||  ||||||||  ||| ||||| || ||    
T  42026803 gtagaaaagagggtggaaactaggcttaggtggtttgagcttgtagagagaaaacttgtagattatttagtaaggagagtagatcagacggaggataatc 42026704  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaactaa-------gatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    | ||| ||||||||| | ||||||  |  ||| |||||||||||||||        |||||||  ||||| ||||| |||||||||||| ||||||||||    
T  42026703 acatccctagaggcagaggaagaccaatcaaagctataagagaaactattaagattgatatagggattaatgagttagatagaaatatggtatatgatag 42026604  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    || ||||||| |  ||||||| ||| ||||||||| ||  || || ||||| || ||||| ||||||||    
T  42026603 aacattatggcgttatttgattcatttagccgaccccacatactgtgataagacttggttcttgttgta 42026535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 344
Target Start/End: Complemental strand, 37598449 - 37598171
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||| || | ||||||||||||||| ||| |  |||||||||||||| |||||| | ||||  |  ||  ||| |||||||| |||||||||  ||    
T  37598449 ggtagcacttaacatagaaaagatggtgggaactcaccttaggtggtttggccatgtatagagaatgtacgtggattatgtagtaagaagagtagatcag 37598350  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta---agatata----gaaattaacgagtttgatagaaata 265  Q
    ||| || ||||| ||||||| ||||||| | || |||  ||||||||| ||||||||||||   |||||||    || ||||| ||||| |||||   ||    
T  37598349 atgaagcgtagttaaatcaccagaggcagaagatgacctagaaaaact-taagagaaactattaagatatatctagagattaatgagttggataggggta 37598251  T
Q  266 tgatatatgatagaatattatggtgacatttgatgcatatagccga-cctcatttagtgggataaaacgtggttgttgtt 344  Q
    ||||||||||||||| ||||||| | |||||||  ||| ||| | | ||||||||||||||||||| | || ||||||||    
T  37598250 tgatatatgatagaacattatggcgtcatttgactcatgtagtcaaccctcatttagtgggataaagcttgattgttgtt 37598171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 45289358 - 45289260
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagt 184  Q
    |||||||||||||||||||   |||||||||||||||| || ||||| |||| | ||||| |||||||||||| |||||||||  ||||||||| ||||    
T  45289358 gtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggatagt 45289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 41842791 - 41842670
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||||||||||||| | ||||||||||||||  ||||||| ||||||   ||| ||| ||||||||  ||||||||  |     
T  41842791 ggtagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaa 41842692  T
Q  173 atggagggtagtcaaatcacta 194  Q
    ||||||| |||||| |||||||    
T  41842691 atggaggatagtcagatcacta 41842670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 329
Target Start/End: Complemental strand, 46431940 - 46431696
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    ||||||||||   ||||||| ||||||||||||||||| |||||||| ||  ||| |||| ||| ||||||||  ||||||||  ||||||||| || ||    
T  46431940 gtagaaaagacaatggaaactcggcttaggtggtttgggcatgtagagag--gatctgtagattctgtagtaaggagagtagataagatggaggatactc 46431843  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    |||||||||||||||     |||   |||||||||||||||||||||       ||||| |||| ||||| ||||| |||||| |||| ||||||||| |    
T  46431842 aaatcactagaggca----gagaactagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggatagagatattatatatgatgg 46431747  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    || |||  || | | |||||| ||| | ||| ||| || ||||||||||||    
T  46431746 aacattgaggcgtcgtttgatccatgtcgccaaccccacttagtgggataa 46431696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 17022747 - 17022689
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    |||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||    
T  17022747 tatgatagaatattatggtgtcatttaattcatgtagccgacctcatttagtgggataa 17022689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 38430850 - 38431010
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| ||||   ||||||||| | |||| |||||||| ||| ||  || | || ||||||||  |||||||||  ||    
T  38430850 ggtagcacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagagacgacctgcagatgttgtagtatgaagagtagatcag 38430949  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||  ||||||||||  ||||| | | ||||||  |||||||||| |||||||||||    
T  38430950 atggaggagagtcaaatcaaaagaggtagaggaagacttagaaaaactacaagagaaacta 38431010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 37227931 - 37228090
Alignment:
Q  74 gtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactaga 173  Q
    |||||| ||| ||||||||| |||| |||||| |||||||||||||||   |||||||| | || |  |||| ||| ||||||||  | ||| || ||||    
T  37227931 gtagcagctatcgtagaaaaaatggcggaaactcggcttaggtggtttctgcatgtagagaaaatagatgtagattatgtagtaaggacagttgaataga 37228030  T
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
     |||||||||||||||||| ||||||| |  |||||  | |||||| ||||| |||||||    
T  37228031 cggagggtagtcaaatcaccagaggcagagaaagacctataaaaacgataagggaaacta 37228090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 26490317 - 26490383
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| ||||   ||||||||||||||||||||||||||| ||||    
T  26490317 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgtagataaaaga 26490383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 39235154 - 39235300
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtca 186  Q
    ||||||||||||| ||||   |||||||||||||||| |||||||| ||||||  |||| || ||||||||  |||||||||  |||||||||  |||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtca 39235253  T
Q  187 aatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
     ||||  ||||| | | ||||||  | |||||||||| || ||||||    
T  39235254 gatcaaaagaggtagaggaagacccaaaaaaactataggataaacta 39235300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 44134097 - 44134039
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgt 144  Q
    |||||||||||||||||||   | |||||||||||||||||| ||||||||||||||||    
T  44134097 gtagaaaagatggtggaaaatagacttaggtggtttggacatctagatagaagatttgt 44134039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 39600961 - 39600801
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||| |||||  ||||||||||||||||||| |  ||||||||||||| | |||||| | ||||||  |||| ||| |||||  |  ||||||||  ||    
T  39600961 ggtagtacctatagtagaaaagatggtggaaaacaagcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcag 39600862  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    || |||| |||||| ||  | ||||| | | ||||||  ||||||||||||||||||||||    
T  39600861 atcgaggatagtcagattgcaagaggtagaggaagacctagaaaaactataagagaaacta 39600801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 39535483 - 39535401
Alignment:
Q  263 atatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||||||||||| ||||||||| | |||||| ||| || ||| || || ||||||||||||| | |||||||||||||    
T  39535483 atatgatatatgatagaacattatggtggcgtttgatccatgtaaccggcc-cacttagtgggataaagcatggttgttgttgt 39535401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 31566234 - 31566160
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||| | ||||||| |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  31566234 tgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 49503834 - 49503768
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| ||||   |||||||||||||||| |||||||| ||||||    
T  49503834 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaaga 49503768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 50960913 - 50960847
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| ||||   |||||||||||||||| |||||||| ||||||    
T  50960913 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaaga 50960847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 299
Target Start/End: Original strand, 55244381 - 55244513
Alignment:
Q  175 ggagggtagtcaaatcactagaggcatatgaagacagagaaaaactat-aagagaaact-------aagatatagaaattaacgagtttgatagaaatat 266  Q
    |||||||||||||||||||||||||  | ||||||  ||||||||| | |||||||| |       || || |||| ||||| ||||| |||||||||||    
T  55244381 ggagggtagtcaaatcactagaggccaaggaagacctagaaaaactcttaagagaaattcttaagaaaaatctagagattaatgagttggatagaaatat 55244480  T
Q  267 gatatatgatagaatattatggtgacatttgat 299  Q
    | |||||||||||| ||||||||| | ||||||    
T  55244481 ggtatatgatagaacattatggtgtcgtttgat 55244513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 21862831 - 21862758
Alignment:
Q  256 gatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||||||||||||  ||||||| | ||||||| |||||||| ||| ||||||||| || |||||| |||||    
T  21862831 gatagaaatatgatattggatagaagaatatggtgtcatttgatccatgtagccgaccccacttagtgagataa 21862758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 27917572 - 27917653
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgta 154  Q
    |||||||||||  |||||||||||||| | ||   ||||||| ||||||||||||||||| |||||| ||||| || |||||    
T  27917572 ggtagcacctatagtagaaaagatggtaggaaataggcttagatggtttggacatgtagaaagaagacttgtagatgttgta 27917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 30723912 - 30723871
Alignment:
Q  246 taacgagtttgatagaaatatgatatatgatagaatattatg 287  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  30723912 taacgagtttgatagatatataatatatgatagaatattatg 30723871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 33755579 - 33755462
Alignment:
Q  116 tggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaa 215  Q
    |||||||||||||||||  ||||   |||| |||||||| | |  ||||||||  ||||||||| | |||  ||||||||||||| | ||| ||  ||||    
T  33755579 tggtttggacatgtagagcgaaggcctgtagattttgtacttaggagagtagatcagatggaggatggtcggatcactagaggcagaggaaaacctagaa 33755480  T
Q  216 aaactataagagaaacta 233  Q
    ||||||||||||||||||    
T  33755479 aaactataagagaaacta 33755462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 39535707 - 39535654
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||||| ||||||||||||||||||||| | || ||||| ||||||    
T  39535707 gtagaaaagatggtagaaacccggcttaggtggtttaggcaagtagagagaaga 39535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 43308564 - 43308724
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccg-gcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagacta 171  Q
    ||||||| |||| |||||||| ||||||||||  |  |||||||||   |||||||||| | | ||||  |||| ||||||||||||  ||||||||  |    
T  43308564 ggtagcagctagtgtagaaaacatggtggaaatgcaagcttaggtgagatggacatgtaaagaaaagacatgtagattttgtagtaatgagagtagatca 43308663  T
Q  172 gatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| ||||||||| || |||||| || |  |||||  |||||||||| |||||||||||    
T  43308664 gatgga-ggtagtcaattctctagagacaaagtaagacctagaaaaactacaagagaaacta 43308724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 54128380 - 54128541
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  |||||||||||||| ||||   |||||||||||||||| |||||||| | ||||  |||| ||  || ||||   ||||||||  ||    
T  54128380 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgtagagtagatcag 54128479  T
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaacta-taagagaaacta 233  Q
    ||||||| |||||| |||   ||||| | | ||||||  |||||||||| ||||||||||||    
T  54128480 atggaggttagtcagatcgaaagaggtagaggaagacctagaaaaactattaagagaaacta 54128541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 7278481 - 7278620
Alignment:
Q  92 aagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatca 191  Q
    |||||||||||||| ||||| | ||||||||| |||||||| || | |  |||| ||||||||| ||  ||||||||   ||||||| |||||||||| |    
T  7278481 aagatggtggaaactcggctcatgtggtttgggcatgtagagagcaaacctgtagattttgtagcaaggagagtagatcggatggagagtagtcaaatta 7278580  T
Q  192 ctagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    ||| ||  ||  ||| ||  |||||||||||||||||||||    
T  7278581 cta-agatattggaaaacctagaaaaactataagagaaact 7278620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 7278663 - 7278747
Alignment:
Q  263 atatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||||||| |||||| |||||   | |||||||| ||| ||||||||| || ||||||||||||| | | ||||||||||||    
T  7278663 atatgatatattatagaacattataacgtcatttgatccatgtagccgaccccacttagtgggataaagcttagttgttgttgta 7278747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 29374951 - 29375059
Alignment:
Q  88 agaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaa 187  Q
    |||||||||||| ||||| || |||||||| ||||| | |||||| | ||||  |||| ||||||||||||  || ||||| |||||||||  |||||      
T  29374951 agaaaagatggtagaaactcgacttaggtgatttgggcttgtagagaaaagacctgtagattttgtagtaaggagtgtagattagatggagaatagtctg 29375050  T
Q  188 atcactaga 196  Q
    |||||||||    
T  29375051 atcactaga 29375059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 37228184 - 37228306
Alignment:
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaata 265  Q
    |||||||||||||||||||||||||||| |  |||||  | |||||| ||||| ||||||       ||||  |||||||||||||||| |||| | |||    
T  37228184 atggagggtagtcaaatcactagaggcagagaaagacctataaaaacgataagggaaactattaagaaagacttagaaattaacgagttggataaagata 37228283  T
Q  266 tgatatatgatagaatattatgg 288  Q
    ||||| ||| ||||| |||||||    
T  37228284 tgataaatggtagaacattatgg 37228306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 46140447 - 46140579
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||| |||||||||  | || ||||||||||||||| |||| ||||||  |||| ||| |||||||| || || |||  |||| || | |||||    
T  46140447 gtagaaaagacggtggaaactagactcaggtggtttggacatatagagagaagacctgtagattctgtagtaaaaatagcagatcagattgatgatagtc 46140546  T
Q  186 aaatcactagaggcatatgaagacagagaaaaa 218  Q
    | |||||||| || ||| ||||||  |||||||    
T  46140547 agatcactaggggaataggaagacctagaaaaa 46140579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 46146206 - 46146258
Alignment:
Q  181 tagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||||||||||||| |||||   ||||||||||||| ||||||||    
T  46146206 tagtcaaatcactagaggcataggaagatctagaaaaactataaaagaaacta 46146258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 53951960 - 53952020
Alignment:
Q  269 tatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||| ||  |||||||||||    
T  53951960 tatatgatagaatattacggtgccgtttgatccatatagccgaccccacatagtgggataa 53952020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 12096780 - 12096705
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  12096780 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 19737002 - 19737105
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatg 175  Q
    ||||||||  |||||||||||||| ||||   || ||||||||||||  |||| ||| ||||||  |||| || ||||||||| |||||||||  |||||    
T  19737002 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19737101  T
Q  176 gagg 179  Q
    ||||    
T  19737102 gagg 19737105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 19757905 - 19758008
Alignment:
Q  76 agcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatg 175  Q
    ||||||||  |||||||||||||| ||||   || ||||||||||||  |||| ||| ||||||  |||| || ||||||||| |||||||||  |||||    
T  19757905 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19758004  T
Q  176 gagg 179  Q
    ||||    
T  19758005 gagg 19758008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 34719352 - 34719257
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||||||| ||||||||||||||||||||  |  |||||||| |||| |||| |||| |||||   |||  ||||||||||||  ||||||||    
T  34719352 ggtagcacctatcgtagaaaagatggtggaaagtcaacttaggtgttttgaacatatagagagaaggcctgttgattttgtagtaaggagagtaga 34719257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 45493782 - 45493695
Alignment:
Q  256 gatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    |||||||| ||| |||||||||||  ||||||| | ||||  || ||| ||||||||| || ||||| ||||||| ||||||||||||    
T  45493782 gatagaaacatggtatatgatagagcattatggcgccattcaatccatgtagccgaccccacttagtaggataaagcgtggttgttgt 45493695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 51447792 - 51447717
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| |||||| || |||||||||||||||  | |||||||||||||    
T  51447792 tatgatagaacactatggcgtcatttgattcatgtagccggccccatttagtgggataaggcttggttgttgttgt 51447717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 53998817 - 53998758
Alignment:
Q  174 tggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| ||||||  |||||||||||| | ||||||  ||||||||||||||||||||||    
T  53998817 tggaggatagtcagttcactagaggcaaaggaagacccagaaaaactataagagaaacta 53998758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 15296104 - 15296190
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||||| |  ||||||| |||||||||  ||||||| ||| | ||||||| || ||||||||||||  | ||||||||||||||    
T  15296104 aaatatgatttcggatagaacattatggtgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgttgta 15296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 24778682 - 24778608
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||| |||||||||  ||||||| ||| ||||||||| || ||||||||||||  | ||| ||||||||||    
T  24778682 tgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggctgttgttgta 24778608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 35033375 - 35033429
Alignment:
Q  293 atttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    ||||||| ||| ||||||||||||| |||||||||||  | ||||||||||||||    
T  35033375 atttgatccatgtagccgacctcatctagtgggataaggcttggttgttgttgta 35033429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 36820241 - 36820175
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||   ||| |||||||||||||||  |||||||||||||| |||||||| | ||||||    
T  36820241 ggtagcacctatattagcaaagatggtggaaactaggcttaggtggtttagacatgtaaagagaaga 36820175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 47233669 - 47233595
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  47233669 tgatagaacactatggcgtcatttgattcatgtagccgaccccagttagtgggataaggcttggttgttgttgta 47233595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 47233876 - 47233810
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  47233876 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 47233810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 22281 - 22354
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | ||||||||  || ||||||||| || ||||||||||||| | |||||||||||||    
T  22281 tgatagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgt 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 311382 - 311309
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  311382 tgatagaacactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttgt 311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 2968247 - 2968336
Alignment:
Q  107 cggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactaga 196  Q
    ||||||||||  ||||| |||||||| |||||||   || ||||||||||||  ||||| ||   ||||||| |||||||||||||||||    
T  2968247 cggcttaggttatttgggcatgtagagagaagatccatagattttgtagtaaggagagttgatcggatggagagtagtcaaatcactaga 2968336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 5169041 - 5169114
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  5169041 tgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 31454298 - 31454225
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  31454298 tgatagaacactatggcgtcatttgattcatttagccgaccccacttagtgggataaggcttggttgttgttgt 31454225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 40982005 - 40982058
Alignment:
Q  180 gtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||||||||||| || | ||||||  |||||||||||||||| |||||    
T  40982005 gtagtcaaatcactagagacaaaggaagacctagaaaaactataagagtaacta 40982058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 48508432 - 48508517
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | ||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  48508432 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 11284136 - 11284210
Alignment:
Q  215 aaaactataagagaaac---taagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattat 286  Q
    |||||||||||||||||   |||||| |||| ||||| ||||| |||| ||||||| |||||||| ||| |||||    
T  11284136 aaaactataagagaaactattaagatgtagagattaatgagttggatataaatatggtatatgattgaacattat 11284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 40116640 - 40116588
Alignment:
Q  181 tagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||| |||||||||| || | ||||||  ||||||||||||||||||||||    
T  40116640 tagtcagatcactagagccaaaggaagacctagaaaaactataagagaaacta 40116588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 40176476 - 40176428
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatg 287  Q
    |||| ||||| ||||||||||||||||| ||||| |||| |||||||||    
T  40176476 tagatattaatgagtttgatagaaatataatataggataaaatattatg 40176428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 346
Target Start/End: Complemental strand, 45486933 - 45486849
Alignment:
Q  262 aatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| | |||||||||| |||||||    ||||||| ||| |||||| || || ||||||||||||| | |||||||||||||    
T  45486933 aatatggtttatgatagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttggttgttgttgt 45486849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 329
Target Start/End: Complemental strand, 21870353 - 21870083
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtag--------atagaagatttgtaaattttgtagtaacaagag 164  Q
    ||||||||||   |||||||||||||| ||||| ||||||||||||||||| ||| |||        | ||||||  |||| ||||||||||||  ||||    
T  21870353 ggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgggcatttaggcatttagagagaagacctgtagattttgtagtaaggagag 21870254  T
Q  165 tagactagatggagggtagtcaaatcactagaggcatatgaagac--agagaaaaactataagagaaactaa----gatatagaaattaacgagtttgat 258  Q
    ||||  |||||||| ||||||||||||||| ||||| | ||||||  ||| |||||||||  |||||||||     ||| |||| ||||| |||||  ||    
T  21870253 tagataagatggagagtagtcaaatcactaaaggcagaggaagacctagaaaaaaactatctgagaaactattaaggatctagagattaatgagttatat 21870154  T
Q  259 agaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    ||  ||||||||||| || ||||||||||||  | |||||| |||  ||||||||||| ||||||||||||    
T  21870153 agggatatgatatatcattgaatattatggttgcgtttgatccatgcagccgacctcacttagtgggataa 21870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 299
Target Start/End: Complemental strand, 33997801 - 33997591
Alignment:
Q  94 gatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcact 193  Q
    ||||||||||||   ||||||||||||||| ||||||||  |||||  | || ||||||||||||   |||||| |||||||||||||||||||| ||||    
T  33997801 gatggtggaaactaagcttaggtggtttgggcatgtagaaggaagacctatagattttgtagtaag--gagtaggctagatggagggtagtcaaaacact 33997704  T
Q  194 agaggcatatgaagacagagaaaaactataagagaaac---taagata----tagaaattaacgagtttgatagaaatatgatatatgatagaatattat 286  Q
    ||||||| | ||||||   | |||||||||||||||||   ||||| |    |||| ||||| ||||| |||||||||||| || ||||| ||| |||||    
T  33997703 agaggcagaggaagaccttggaaaactataagagaaactattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaacattat 33997604  T
Q  287 ggtgacatttgat 299  Q
    || | ||||||||    
T  33997603 ggcgtcatttgat 33997591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 346
Target Start/End: Complemental strand, 9593973 - 9593710
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtc 185  Q
    |||||||||||||| ||||   |||||||||||||||| |||||||| ||||||  |||| ||  |||||||| |||||||||  |||||||||  ||||    
T  9593973 gtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtc 9593874  T
Q  186 aaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagtttgatagaaatatgatatatgatag 278  Q
    ||||||  ||||| | | ||||||  ||||||| |||||||||||||       ||||  |||| ||||| ||||| |||   |||||| | ||||||||    
T  9593873 aaatca--agaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgatag 9593776  T
Q  279 aatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    || ||||||||   ||||||| |||||||| |||| || ||||||| ||||  | |||||||||||||    
T  9593775 aacattatggt--aatttgatccatatagctgaccacacttagtggcataaggcttggttgttgttgt 9593710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 32913518 - 32913417
Alignment:
Q  97 ggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactaga 196  Q
    |||| |||| ||||||||||||||||| |||||||| | |||| ||||| ||| ||||| ||  |||||| | |||||||||||||||||||||||||||    
T  32913518 ggtgaaaactcggcttaggtggtttggccatgtagagaaaagagttgtagattatgtagcaaggagagtatattagatggagggtagtcaaatcactaga 32913419  T
Q  197 gg 198  Q
    ||    
T  32913418 gg 32913417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 14389447 - 14389324
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||||||| |||||||||||||||||||||    ||||||||||||||||||||||| ||||||  | || | ||||||||||  ||| ||||  ||    
T  14389447 ggtagcacctatcgtagaaaagatggtggaaacaaa-cttaggtggtttggacatgtagagagaagacctatagactttgtagtaaggagaatagatcag 14389349  T
Q  173 atggagggtagtcaaatcactagag 197  Q
    ||||||| |||||| ||||||||||    
T  14389348 atggaggatagtcagatcactagag 14389324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 188 - 346
Target Start/End: Complemental strand, 34670 - 34505
Alignment:
Q  188 atcactagaggcatatgaagacagagaaaaactataagagaaacta-------agatatagaaattaacgagtttgatagaaatatgatatatgatagaa 280  Q
    ||||||||||||| | ||||||  |||||||||||||||||||| |       |||| || | ||||| ||||| ||| |||||||| | ||||||||||    
T  34670 atcactagaggcagaggaagacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaa 34571  T
Q  281 tattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
     ||||||| |  ||||||| ||| |||| |||| || |||||||||||| || |||||||||||||    
T  34570 cattatggcgtaatttgatccatgtagctgaccccacttagtgggataagacttggttgttgttgt 34505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 1615298 - 1615222
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | ||||  | |||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||    
T  1615298 tatgatagaacactatgacgtcatttgatccatgtagccgacctcatttagtgggataagacttggttgttgttgta 1615222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 2079342 - 2079462
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    ||||||| |||  |||||||||||||||||||   |||||| ||||||| |  ||||||| |||||||||||| ||| ||||||||  |||||| | |||    
T  2079342 ggtagcatctatagtagaaaagatggtggaaaataggcttaagtggtttaggtatgtagagagaagatttgtagattatgtagtaaggagagtaaattag 2079441  T
Q  173 atggagggtagtcaaatcact 193  Q
    ||||||| | |||| ||||||    
T  2079442 atggaggctggtcagatcact 2079462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 24665825 - 24665973
Alignment:
Q  86 gtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgta-aattttgtagtaacaagagtagactagatggagggtagt 184  Q
    |||||||| ||||| ||||   ||||||||||||||||||||||||| ||||||  |||| | |||||||||||  ||||||||  ||||| ||  ||||    
T  24665825 gtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatcagatgaagcatagt 24665924  T
Q  185 caaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |  ||||| ||||||| | |||| || |||| ||||| |||||||||||    
T  24665925 cggatcaccagaggcagaggaagtcatagaataactacaagagaaacta 24665973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 9749497 - 9749355
Alignment:
Q  80 cctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagg 179  Q
    |||| ||||||||||| |||||||||  || ||||||||||| |  ||||||| |||||   |||| ||||| |||||| |||||||||  | |  ||||    
T  9749497 cctatcgtagaaaagaaggtggaaacttggtttaggtggtttagggatgtagagagaagtcatgtagattttatagtaagaagagtagatcaaacagagg 9749398  T
Q  180 gtagtcaaatcactagaggcatatgaagacagagaaaaactat 222  Q
    |||||||||||| |||||||| | |||||   |||||||||||    
T  9749397 gtagtcaaatcattagaggcagaggaagatctagaaaaactat 9749355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 43318 - 43237
Alignment:
Q  87 tagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtaga 168  Q
    ||||||| |||||||||||  |||||||||||| ||| |||||||| ||||||||| || |||||||||  | |||||||||    
T  43318 tagaaaaaatggtggaaactaggcttaggtggtctggccatgtagagagaagatttatagattttgtagcgagaagagtaga 43237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 586040 - 586132
Alignment:
Q  254 ttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||||||  |||||||||||| ||||||  | |||||||| |||  ||||||||||| ||| ||||||||| | || ||||||||||    
T  586040 ttgatagaaatattgtatatgatagaacattatgacgtcatttgattcatggagccgacctcacttaatgggataaaccttgattgttgttgt 586132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 6907072 - 6906972
Alignment:
Q  108 ggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagaggcatatgaag 207  Q
    |||||| || ||||||  ||||||| ||||||  |||| ||||||||||||  ||||||||  ||||| |||||||||||||||| ||||| | ||||||    
T  6907072 ggcttacgtagtttggttatgtagagagaagacatgtagattttgtagtaaggagagtagatcagatgcagggtagtcaaatcacgagaggtagatgaag 6906973  T
Q  208 a 208  Q
    |    
T  6906972 a 6906972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 28085583 - 28085658
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||||| |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  28085583 tatgatagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 1747824 - 1747762
Alignment:
Q  170 tagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact 232  Q
    ||||||||||||||||||||  ||||||||| | ||||||  |||||||| ||||||||||||    
T  1747824 tagatggagggtagtcaaatttctagaggcagaggaagacctagaaaaaccataagagaaact 1747762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 326
Target Start/End: Original strand, 8364646 - 8364818
Alignment:
Q  161 agagtagactagatggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaact-------aagatatagaaattaacgagt 253  Q
    ||||||||  ||||||||| | |||| ||||||||||| | ||||||||  | |||||||||||||||||||       ||||| ||||||||||  |||    
T  8364646 agagtagatcagatggaggattgtcagatcactagaggaagatgaagacctaaaaaaactataagagaaactattaagaaagatttagaaattaataagt 8364745  T
Q  254 ttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtggga 326  Q
    | ||  |||| ||| | |||||||||| ||||||| |  ||||||| ||| ||||||||| |  |||||||||    
T  8364746 tggactgaaacatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccgcttagtggga 8364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 32945428 - 32945506
Alignment:
Q  244 attaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagt 322  Q
    ||||| ||||| |||||||||||  |||||||||||| ||||||||| | |||||| ||| |||||||| ||| |||||    
T  32945428 attaatgagttagatagaaatattttatatgatagaacattatggtgtcgtttgatccatgtagccgacatcacttagt 32945506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 32515568 - 32515525
Alignment:
Q  115 gtggtttggacatgtagatagaagatttgtaaattttgtagtaa 158  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||    
T  32515568 gtggtttgggcatgtagatagaagattggtagattttgtagtaa 32515525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 4948579 - 4948541
Alignment:
Q  85 cgtagaaaagatggtggaaacccggcttaggtggtttgg 123  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  4948579 cgtagaaaagatggtggaaattcggcttaggtggtttgg 4948541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 4955550 - 4955512
Alignment:
Q  85 cgtagaaaagatggtggaaacccggcttaggtggtttgg 123  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  4955550 cgtagaaaagatggtggaaattcggcttaggtggtttgg 4955512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 5258428 - 5258362
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  ||||||||| |||| ||||   ||||||| ||||||||||||||||| ||||||    
T  5258428 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 5258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 6293499 - 6293409
Alignment:
Q  239 tagaaattaacgagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataa 329  Q
    |||| ||||| ||||| |||||||||||| |||||||||||  |||||||  || |||| |  || ||||||||| || ||||||||||||    
T  6293499 tagatattaatgagttagatagaaatatggtatatgatagagcattatggcaacgtttggtcaatgtagccgaccccacttagtgggataa 6293409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 10617414 - 10617356
Alignment:
Q  173 atggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaac 231  Q
    |||||||| ||||||||||||||||| | | ||| ||  ||||||||||||||||||||    
T  10617414 atggaggggagtcaaatcactagaggtagaagaaaacctagaaaaactataagagaaac 10617356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 30031453 - 30031535
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgt 343  Q
    ||||||| | |||||||||| | ||||| |  ||||||| ||| |||||||||||| ||||||||||||  | ||||||||||    
T  30031453 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgt 30031535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 33084060 - 33084126
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaaga 139  Q
    |||||||||||  |||||||||||||| |||||  | ||||||||||||||  ||||||| ||||||    
T  33084060 ggtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaaga 33084126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 12890772 - 12890857
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||| | |||||||||| | ||||| |  ||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  12890772 aaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 14030992 - 14031077
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||| | |||||||||| |||   | |||||||| |||||| ||||||  |||||||||||||||   |||||||||||||    
T  14030992 aaatatgatttttgatagaatactataacgtcatttgatccatataaccgaccctatttagtgggataaagtttggttgttgttgt 14031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 22993661 - 22993608
Alignment:
Q  258 tagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccga 311  Q
    |||||||||||||||||||| ||||||||| |  |||||||| ||| |||||||    
T  22993661 tagaaatatgatatatgataaaatattatgttatcatttgattcatgtagccga 22993608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 23794737 - 23794790
Alignment:
Q  258 tagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccga 311  Q
    |||||||||||||||||||| ||||||||| |  |||||||| ||| |||||||    
T  23794737 tagaaatatgatatatgataaaatattatgttatcatttgattcatgtagccga 23794790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 34939285 - 34939382
Alignment:
Q  250 gagtttgatagaaatatgatatatgatagaatattatggtgacatttgatgcatatagccga-cctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||| ||| |||||||| | |||||||  |||||||||||  ||||||| ||||||||||| || || ||||||| ||||||| || ||||| ||||    
T  34939285 gagttggatcgaaatatggtttatgatatgatattatggtgtaatttgatccatatagccgacccccacttagtggcataaaacatgattgttcttgt 34939382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 345
Target Start/End: Original strand, 608370 - 608442
Alignment:
Q  273 tgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttg 345  Q
    |||||||||| ||||  | |||||||| ||| |||||||||  | |||||||||||| || ||||||||||||    
T  608370 tgatagaatactatgacgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttgttg 608442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 4334972 - 4335044
Alignment:
Q  274 gatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    ||||||||||||||||   |||| || ||| ||||||| |||||||||||| |||||   |||||||||||||    
T  4334972 gatagaatattatggtataatttaattcatgtagccgatctcatttagtggaataaagtttggttgttgttgt 4335044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 5897524 - 5897604
Alignment:
Q  118 gtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaatcactagagg 198  Q
    |||||| |||||||| ||||||| |||| |||||||||||   ||||||||   |||||||| ||||||||| || |||||    
T  5897524 gtttgggcatgtagagagaagatatgtatattttgtagtatggagagtagatcggatggaggatagtcaaattacaagagg 5897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 6293649 - 6293541
Alignment:
Q  90 aaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagatggagggtagtcaaat 189  Q
    |||| |||||||||||  || | ||||||||||| |||||||| |||| |  |||| ||| |||| |||  |||||| |  ||||| ||| |||||||||    
T  6293649 aaaatatggtggaaactaggttcaggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaaggatagtcaaat 6293550  T
Q  190 cactagagg 198  Q
    |||||||||    
T  6293549 cactagagg 6293541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 34934905 - 34934829
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgta 347  Q
    |||||||||| | |||||   |||||||| ||| ||||||||| || ||||||||||||  | ||||||||||||||    
T  34934905 tatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 34934829  T

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Target: scaffold0325 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 11802 - 11959
Alignment:
Q  75 tagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactagat 174  Q
    |||||||||  |||||||||||||| | ||| ||||||||||||||||| |||||||| ||||||| ||| |  | |||| | |  ||||||||   | |    
T  11802 tagcacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaagatctgt-agctatgtattgaggagagtagatccggt 11900  T
Q  175 ggagggtagtcaaatcactagaggcatatgaagacagagaaaaactataagagaaacta 233  Q
    |||||||||| ||||||||||||||| | |||||   ||||||||||||||||||||||    
T  11901 ggagggtagtgaaatcactagaggcaaaagaagaactagaaaaactataagagaaacta 11959  T

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Target: scaffold0018 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 44148 - 44023
Alignment:
Q  73 ggtagcacctagcgtagaaaagatggtggaaacccggcttaggtggtttggacatgtagatagaagatttgtaaattttgtagtaacaagagtagactag 172  Q
    |||||||||||  ||||||||||||| |||||   |||||||||||||||| |||||||| ||||||  |  | ||| | ||||||  ||||||||||||    
T  44148 ggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagaccttcagattctctagtaaggagagtagactag 44049  T
Q  173 atggagggtagtcaaatcactagagg 198  Q
    ||||||| |||||| |||||||||||    
T  44048 atggaggatagtcagatcactagagg 44023  T

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Target: scaffold0187 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 2988 - 2942
Alignment:
Q  243 aattaacgagtttgatagaaatatgatatatgatagaatattatggt 289  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  2988 aattaatgagtttgatagaaatatgatatacgatagaaaattatggt 2942  T

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Target: scaffold0570 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 1023 - 948
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| |||| |||| |||||||||||||||  | |||||||||||||    
T  1023 tatgatagaacactatggcgtcatttgatccatgtagctgaccccatttagtgggataaggcttggttgttgttgt 948  T

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Target: scaffold0373 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 2414 - 2359
Alignment:
Q  233 aagatatagaaattaacgagtttgatagaaatatgatatatgatagaatattatgg 288  Q
    ||||| |||| ||||| |||||||||||||||||| ||||| |||||| |||||||    
T  2414 aagatctagagattaatgagtttgatagaaatatgttatataatagaacattatgg 2359  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 28964 - 28889
Alignment:
Q  271 tatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||||||| | ||||| | |||||||| ||| ||||||||| || ||||||||||||  | |||||||||||||    
T  28964 tatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 82915 - 83003
Alignment:
Q  261 aaatatgatatatgatagaatattatggtgacatttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgtact 349  Q
    ||||||||| |||||||||| | ||||  | |||||||| ||| ||||||||| || ||| ||| ||||  | ||||||||||||||||    
T  82915 aaatatgatttatgatagaacactatgacgtcatttgatccatgtagccgaccccacttaatggaataaggcttggttgttgttgtact 83003  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 163246 - 163194
Alignment:
Q  294 tttgatgcatatagccgacctcatttagtgggataaaacgtggttgttgttgt 346  Q
    |||||| ||||||||||||  |||||||||| ||||||| || ||||||||||    
T  163246 tttgattcatatagccgactccatttagtggaataaaacttgattgttgttgt 163194  T

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