View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17133_high_34 (Length: 242)
Name: NF17133_high_34
Description: NF17133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17133_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 45551014 - 45551254
Alignment:
| Q |
1 |
tgcacctttggatatctcatttatctgtacaagagagagggtgtggctagttgaagctagttgcctgtccaagttgcttcctctatccattcctcccctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45551014 |
tgcacctttggatatctcatttatctgtacaagagagagggtatggctagttgaagctagttgcctgtccaagttgcttcctctatccattccttccctt |
45551113 |
T |
|
| Q |
101 |
tgaatctggtgaaggaaacccagaattgaattggtgatagacagatcggcccttcttagtttccctccattattgtcgaaggctttcccgtatgggataa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45551114 |
tgaatctggtgaaggaaacccagaattgaattggtgatagacagatcggcccttcctagtttccctccattattgtcgaaggctttcccgtatgggataa |
45551213 |
T |
|
| Q |
201 |
tctgatttgacaagtctcctgcacgctttactgatctctgc |
241 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| |
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| T |
45551214 |
tctgatttgacaagtctcctgcactctttactgatctctgc |
45551254 |
T |
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