View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17133_high_43 (Length: 203)
Name: NF17133_high_43
Description: NF17133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17133_high_43 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 45551016 - 45550823
Alignment:
| Q |
10 |
gcacagaaactaaaccacgtattgagagcttgctgctccaatggtgccaacatggatacatattcattaacttttgcaaaggaactattacaaggagcta |
109 |
Q |
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| T |
45551016 |
gcacagaagctaaaccacgtattgagagcttgctgctccaatggtgtcaacatggatacatattcattaacttttgcaaaggaactattacaaggagcta |
45550917 |
T |
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| Q |
110 |
ttgatttggaagagtcgctcggaatactagtggatctgcagaaaagttcagagtttatgattacctcgcaagcacagaacaaaaatcgaatcac |
203 |
Q |
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| T |
45550916 |
ttgatttggaagagtcgctcggaatactagtggatctgcagaaaagttcagagtttatgattacctcgcaagcacagaacaaaaatcgaatcac |
45550823 |
T |
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