View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17133_high_6 (Length: 437)
Name: NF17133_high_6
Description: NF17133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17133_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 2 - 419
Target Start/End: Original strand, 25919690 - 25920107
Alignment:
| Q |
2 |
taagtgaaaaggcgggaggaaacttcaatcagagatcaaattccgaatactccagctgatgtctacagagaacccataagaaggaatactctagaagaag |
101 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25919690 |
taagtgaaaaggcggaaggaaacttcaatcagagatcaaattccgaatactccagctgatgtctacagagaacccataagaaggaatactccagaagaag |
25919789 |
T |
|
| Q |
102 |
tgactcaacatcctatcagaagatctccagtgaaaacttcaaacaagatagacaaatctcttgaagaagaagtaggtgaaattttggattaagtacctat |
201 |
Q |
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|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
25919790 |
tgactcaacatcctatcagaagatctccggtcaaaacttcaaagaagatagacaaatctcttgaagaagaagtagatgaaattttggattaagtacctat |
25919889 |
T |
|
| Q |
202 |
tgaatcaccccaaacaaatagtaagaaggctaaagtaacgactccgcctaaagctactacacctgagcaatccaagagaataaagggtaaaaaggttcag |
301 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25919890 |
tgaatcacctcaaacaaatagtaagaaggctaaagtaacgactccgcccaaagctactacacctgagaaatccaagagaataaagggtaaaaaggttcag |
25919989 |
T |
|
| Q |
302 |
actcaaaccatacccactattgttgaagatgaagaagatgaagaggaagaaatgcctcgtagaagaagacaaaggatctttcagactactgaacaagctc |
401 |
Q |
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|||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25919990 |
actcaaaccatacccattattgttgaagaagaagaagacgaagaggaagaaatgcctcgtagaagaagacaaaggatctttcagactactgaacaagctc |
25920089 |
T |
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| Q |
402 |
caacagaacctgaagcaa |
419 |
Q |
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|||||||||||||||||| |
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| T |
25920090 |
caacagaacctgaagcaa |
25920107 |
T |
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