View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17133_high_8 (Length: 418)
Name: NF17133_high_8
Description: NF17133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17133_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 17 - 402
Target Start/End: Original strand, 21343752 - 21344136
Alignment:
| Q |
17 |
agaacagaacaagtcagtaatctaaatggatgtagttgtacagcgcccaatatcacttcactgcttacctcaaagtgagattttaatttattcctaacca |
116 |
Q |
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| T |
21343752 |
agaacagaacaagtcagttatctaaatggatgtagttgtacagcgcccaatatcacttcactgcttacctcaaagtgagattttaatttattcctaacca |
21343851 |
T |
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| Q |
117 |
attttcatccttcatgtacttgcagttattatatttatatgctaactaaaatttcataaagcttagtagttagttttggtgtgcatgcaatgtggttttt |
216 |
Q |
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| T |
21343852 |
attttcatccttcatgtacttgcagttattatatttatatgctaactaaaatttcataaagcttagtagttagttttggtgtgcatgcaatgtggttttt |
21343951 |
T |
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| Q |
217 |
agtttttactgggtggttcttcagtttggtggaaccaacgtgccaattcattcctatgttaattgaataaatgtcacgttaga-tataattcaccttcat |
315 |
Q |
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| T |
21343952 |
agtttttactgggtggttcttcagtttggtggaaccaccgtgccaattcattcctatgttaattgaataaatgtcacgttagattataattcaccttcat |
21344051 |
T |
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| Q |
316 |
taattttcagaacaaaaagattggtgttaagtgttaactcaaagaaatgccaaaattaagttaccagaattaatgctgcaggaaaat |
402 |
Q |
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| T |
21344052 |
taattttcagaacaaaaagattggtgttaagtgttaactc--agaaatgccaaaattaagttaccagaattaatgctgcaggaaaat |
21344136 |
T |
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