View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_133 (Length: 221)
Name: NF17134_high_133
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_133 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 43667812 - 43667620
Alignment:
| Q |
15 |
aagaaccagataacatagtccaattaaaatgacacaagtaatagcactagttatagcatgtttgattccgcgttgatgtggtgctaaacacaaggtggtt |
114 |
Q |
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| T |
43667812 |
aagaaccagataacatagtccaattaaaatgacacaagtaatagcactagttatagcatgtttgattccgctttgatgtggtgctaaacacaaggtggtt |
43667713 |
T |
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| Q |
115 |
gaactctacatggcaaagtttatgttcttaatggaaaaaactcaattcttacattaaatagatatgagacttaaaatgagtttacaaagaatt |
207 |
Q |
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| T |
43667712 |
gaactctacatggcaaagtttatgttcttaatggaaaaaactcaattcttacattaaatagatatgagacttaaaatgagtttacaaagaatt |
43667620 |
T |
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