View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_32 (Length: 451)
Name: NF17134_high_32
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 21599675 - 21599243
Alignment:
| Q |
1 |
ctaaccacaaatggagtgttgaatccaaagcaaaccaataacgatagcaagagcaattttgatctgtgacttcatttattcaaccccatacactacaaga |
100 |
Q |
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| T |
21599675 |
ctaaccacaaatggagtgttgaatccaaagcaaactaataacaatagcaagagcaattttgatctgtgacttcatttattcaaccccatacactacaaga |
21599576 |
T |
|
| Q |
101 |
aaaaaccacttatcactacacagatatttgggcaacaatttttctcatgtcaggaaataaagcatatatctaatatcattttctaagacagtaaattcat |
200 |
Q |
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| T |
21599575 |
aaaaaccacttatcactacacagatatttgggcaacaatttttctcatgtcaggaaataaagcatatatctaatatcattttctaagacagtaaattcat |
21599476 |
T |
|
| Q |
201 |
gtgccaaccaaaacaaaatcacaagcagatgaacagaaacttgcagctagatcctttcaaatattgtatttgtgagagacagagaagtgaaaagagcaat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||| || |
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| T |
21599475 |
gtgccaaccaaaacaaaatcacaagcagatgaacagaaacttgcagctatattctttcaaatattgtatttgtgagagac--agaagtaaaaagagcgat |
21599378 |
T |
|
| Q |
301 |
atatttaaccagttaatggttacaatgtatttaaagtatacagtaagtgccatatcttcaacactcaaaattttaccaaactnnnnnnnttcaagttttt |
400 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
21599377 |
agatttaaccagttaatggttacaatgtatttaaagtatacagtaagtgccatatcttcaacactcaaaattttaccaaactaaaaaaattcaagttttt |
21599278 |
T |
|
| Q |
401 |
tggagcaaatagcaaaacttaattgacttgatttt |
435 |
Q |
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| T |
21599277 |
tggagcaaataacaaaacttaattgacttgatttt |
21599243 |
T |
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