View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17134_high_43 (Length: 394)

Name: NF17134_high_43
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17134_high_43
NF17134_high_43
[»] chr3 (50 HSPs)
chr3 (10-257)||(42548073-42548334)
chr3 (54-191)||(49893353-49893490)
chr3 (36-185)||(40362613-40362763)
chr3 (54-186)||(272242-272374)
chr3 (54-185)||(4168205-4168336)
chr3 (36-185)||(10617317-10617466)
chr3 (49-185)||(41553973-41554109)
chr3 (54-185)||(52520703-52520834)
chr3 (54-185)||(53489857-53489988)
chr3 (55-185)||(48725294-48725424)
chr3 (51-180)||(2119450-2119577)
chr3 (60-185)||(2938073-2938198)
chr3 (71-187)||(29241676-29241792)
chr3 (30-185)||(43786868-43787024)
chr3 (71-190)||(41993648-41993766)
chr3 (54-185)||(42964282-42964413)
chr3 (54-185)||(46352656-46352787)
chr3 (71-185)||(858628-858742)
chr3 (73-191)||(7468452-7468569)
chr3 (54-191)||(18014694-18014831)
chr3 (54-198)||(52246604-52246749)
chr3 (30-185)||(49529299-49529457)
chr3 (71-185)||(38852253-38852370)
chr3 (54-185)||(39074441-39074571)
chr3 (65-185)||(2505382-2505502)
chr3 (54-194)||(20924014-20924154)
chr3 (71-183)||(22248925-22249037)
chr3 (55-191)||(24488389-24488525)
chr3 (74-185)||(11308244-11308354)
chr3 (36-185)||(43269772-43269922)
chr3 (60-185)||(50298978-50299103)
chr3 (89-185)||(6842676-6842772)
chr3 (54-185)||(41304027-41304156)
chr3 (71-186)||(13159936-13160051)
chr3 (84-186)||(33140937-33141039)
chr3 (83-194)||(50359210-50359321)
chr3 (71-186)||(50395595-50395709)
chr3 (71-185)||(28139348-28139462)
chr3 (71-185)||(31514830-31514943)
chr3 (331-376)||(42548408-42548453)
chr3 (80-156)||(2362880-2362955)
chr3 (107-179)||(52552549-52552620)
chr3 (55-112)||(2391630-2391687)
chr3 (55-112)||(2393391-2393448)
chr3 (76-141)||(21010041-21010103)
chr3 (94-131)||(6842605-6842642)
chr3 (97-185)||(53054869-53054956)
chr3 (89-127)||(6842636-6842674)
chr3 (71-117)||(52718206-52718252)
chr3 (54-111)||(23925302-23925359)
[»] chr5 (27 HSPs)
chr5 (22-185)||(6283551-6283715)
chr5 (74-185)||(40564437-40564548)
chr5 (59-191)||(20175254-20175386)
chr5 (30-187)||(9721638-9721796)
chr5 (58-185)||(13661834-13661961)
chr5 (54-185)||(35132544-35132674)
chr5 (71-185)||(21547427-21547541)
chr5 (72-185)||(34650866-34650979)
chr5 (29-180)||(39066973-39067125)
chr5 (72-185)||(12506336-12506449)
chr5 (54-185)||(11958000-11958131)
chr5 (72-185)||(8787379-8787492)
chr5 (72-185)||(35504273-35504386)
chr5 (36-139)||(4837261-4837364)
chr5 (54-185)||(10054386-10054516)
chr5 (71-185)||(11846111-11846225)
chr5 (55-164)||(13470174-13470283)
chr5 (36-185)||(31909635-31909779)
chr5 (33-180)||(19436876-19437022)
chr5 (54-156)||(10069991-10070092)
chr5 (54-156)||(19647720-19647822)
chr5 (77-185)||(10955997-10956104)
chr5 (71-175)||(40057346-40057450)
chr5 (77-181)||(39069425-39069527)
chr5 (71-140)||(2619635-2619704)
chr5 (94-185)||(4268624-4268714)
chr5 (76-129)||(6284839-6284892)
[»] chr4 (53 HSPs)
chr4 (65-185)||(36395132-36395252)
chr4 (54-185)||(32217067-32217197)
chr4 (71-185)||(12356283-12356397)
chr4 (31-185)||(4220193-4220347)
chr4 (70-185)||(46148977-46149092)
chr4 (55-194)||(54655900-54656039)
chr4 (71-185)||(30154196-30154310)
chr4 (54-191)||(29591211-29591348)
chr4 (74-185)||(47231905-47232016)
chr4 (54-185)||(50619108-50619239)
chr4 (52-186)||(24679675-24679808)
chr4 (72-185)||(789563-789676)
chr4 (30-186)||(32202513-32202669)
chr4 (30-185)||(3783534-3783690)
chr4 (71-191)||(53655905-53656025)
chr4 (54-194)||(54897330-54897470)
chr4 (54-185)||(4268855-4268986)
chr4 (71-190)||(19503133-19503252)
chr4 (71-186)||(39843946-39844061)
chr4 (54-185)||(43944529-43944660)
chr4 (55-185)||(4089165-4089295)
chr4 (36-185)||(33108706-33108855)
chr4 (72-185)||(16536088-16536201)
chr4 (72-185)||(43202416-43202529)
chr4 (77-185)||(50603272-50603381)
chr4 (56-185)||(42898777-42898908)
chr4 (77-185)||(6164138-6164246)
chr4 (54-185)||(7768960-7769091)
chr4 (55-185)||(54945812-54945941)
chr4 (56-185)||(28755644-28755772)
chr4 (72-185)||(37987975-37988088)
chr4 (76-185)||(53268764-53268872)
chr4 (54-178)||(15186265-15186389)
chr4 (82-186)||(30387166-30387270)
chr4 (54-185)||(18067912-18068043)
chr4 (84-185)||(31517217-31517319)
chr4 (59-185)||(52533818-52533944)
chr4 (72-185)||(31680496-31680609)
chr4 (71-143)||(42815148-42815220)
chr4 (54-185)||(55882706-55882835)
chr4 (54-195)||(5091634-5091774)
chr4 (71-156)||(54054587-54054672)
chr4 (96-179)||(39877288-39877371)
chr4 (71-195)||(52697091-52697214)
chr4 (58-174)||(49915185-49915301)
chr4 (83-185)||(41265510-41265611)
chr4 (114-194)||(53003980-53004060)
chr4 (78-140)||(46688283-46688345)
chr4 (52-128)||(50167611-50167685)
chr4 (97-185)||(16820917-16821005)
chr4 (114-175)||(8133789-8133850)
chr4 (57-185)||(1432581-1432703)
chr4 (76-194)||(17344683-17344800)
[»] chr8 (50 HSPs)
chr8 (54-185)||(11112661-11112792)
chr8 (54-185)||(27988532-27988663)
chr8 (54-185)||(28045834-28045965)
chr8 (51-185)||(43119236-43119370)
chr8 (58-191)||(33357156-33357289)
chr8 (58-185)||(42035014-42035141)
chr8 (33-194)||(29444164-29444326)
chr8 (54-185)||(13643034-13643164)
chr8 (54-185)||(13743459-13743589)
chr8 (54-185)||(16394094-16394225)
chr8 (71-185)||(7304551-7304665)
chr8 (71-185)||(16888577-16888691)
chr8 (71-185)||(36730483-36730597)
chr8 (74-195)||(28626810-28626931)
chr8 (57-186)||(40831302-40831431)
chr8 (54-185)||(4537777-4537908)
chr8 (55-185)||(34228705-34228835)
chr8 (71-185)||(37373244-37373358)
chr8 (29-185)||(2805293-2805450)
chr8 (54-191)||(20831580-20831717)
chr8 (54-185)||(168488-168619)
chr8 (58-185)||(9063085-9063212)
chr8 (54-185)||(30675606-30675736)
chr8 (72-182)||(12203894-12204004)
chr8 (72-182)||(12448322-12448432)
chr8 (71-185)||(16890513-16890627)
chr8 (56-185)||(16785110-16785239)
chr8 (54-185)||(4648216-4648347)
chr8 (72-194)||(21595886-21596008)
chr8 (70-156)||(34192813-34192899)
chr8 (54-185)||(9253935-9254065)
chr8 (56-185)||(3930266-3930395)
chr8 (71-185)||(32113947-32114062)
chr8 (76-179)||(42433583-42433685)
chr8 (65-137)||(9278245-9278317)
chr8 (71-175)||(10870391-10870495)
chr8 (71-194)||(9537848-9537971)
chr8 (95-191)||(39406905-39407001)
chr8 (104-186)||(24843311-24843393)
chr8 (71-166)||(17467642-17467737)
chr8 (71-194)||(29235274-29235397)
chr8 (56-196)||(22956730-22956871)
chr8 (71-137)||(10618057-10618123)
chr8 (125-179)||(14191049-14191103)
chr8 (86-164)||(30933376-30933453)
chr8 (83-141)||(22451835-22451892)
chr8 (58-109)||(12652656-12652707)
chr8 (78-165)||(36057904-36057992)
chr8 (57-99)||(36923782-36923824)
chr8 (76-129)||(37713990-37714044)
[»] chr2 (40 HSPs)
chr2 (71-185)||(26387097-26387211)
chr2 (54-186)||(561550-561682)
chr2 (54-185)||(31438668-31438799)
chr2 (74-185)||(35851784-35851895)
chr2 (36-185)||(22887753-22887903)
chr2 (71-194)||(2898110-2898233)
chr2 (65-194)||(25782857-25782983)
chr2 (54-185)||(27856429-27856560)
chr2 (54-185)||(31390034-31390165)
chr2 (71-185)||(1859201-1859315)
chr2 (55-185)||(6580212-6580342)
chr2 (55-185)||(20552954-20553084)
chr2 (71-185)||(22567641-22567755)
chr2 (71-185)||(34442565-34442679)
chr2 (55-185)||(38590907-38591037)
chr2 (36-181)||(11021259-11021404)
chr2 (54-185)||(30486232-30486363)
chr2 (54-185)||(32360902-32361033)
chr2 (71-194)||(32860141-32860263)
chr2 (72-185)||(4381835-4381948)
chr2 (71-191)||(5093566-5093686)
chr2 (54-185)||(44587924-44588055)
chr2 (54-185)||(22068353-22068483)
chr2 (71-186)||(5881256-5881375)
chr2 (71-185)||(13574062-13574176)
chr2 (65-186)||(25772143-25772265)
chr2 (31-185)||(28600966-28601119)
chr2 (71-165)||(43637203-43637297)
chr2 (55-172)||(38296200-38296317)
chr2 (71-191)||(8969434-8969554)
chr2 (30-185)||(3668146-3668301)
chr2 (60-194)||(4022503-4022636)
chr2 (71-185)||(27584777-27584891)
chr2 (76-165)||(15079012-15079100)
chr2 (54-141)||(26891740-26891827)
chr2 (65-185)||(29102316-29102436)
chr2 (83-185)||(15146683-15146784)
chr2 (76-162)||(39531868-39531953)
chr2 (76-185)||(34123058-34123166)
chr2 (76-172)||(30834409-30834504)
[»] scaffold0045 (2 HSPs)
scaffold0045 (29-185)||(50544-50701)
scaffold0045 (71-191)||(53384-53493)
[»] chr7 (47 HSPs)
chr7 (54-185)||(30810677-30810808)
chr7 (54-194)||(29993511-29993651)
chr7 (71-185)||(43594069-43594183)
chr7 (58-190)||(8754613-8754745)
chr7 (58-185)||(5729372-5729499)
chr7 (71-185)||(24798436-24798550)
chr7 (71-185)||(28587948-28588062)
chr7 (51-185)||(46716657-46716791)
chr7 (72-185)||(5239325-5239438)
chr7 (72-185)||(24438517-24438630)
chr7 (54-180)||(47839514-47839640)
chr7 (71-185)||(11686355-11686471)
chr7 (72-185)||(45045810-45045923)
chr7 (54-185)||(12218469-12218600)
chr7 (54-185)||(34606283-34606414)
chr7 (71-185)||(4628605-4628719)
chr7 (71-185)||(7689233-7689347)
chr7 (55-191)||(47657003-47657137)
chr7 (33-185)||(23363200-23363352)
chr7 (65-185)||(33636485-33636605)
chr7 (71-185)||(13064909-13065024)
chr7 (55-185)||(1737003-1737132)
chr7 (71-185)||(18117182-18117296)
chr7 (82-195)||(37674127-37674240)
chr7 (72-185)||(42044326-42044439)
chr7 (59-185)||(525108-525234)
chr7 (54-185)||(18485983-18486114)
chr7 (54-185)||(34333306-34333436)
chr7 (71-185)||(47083094-47083208)
chr7 (65-185)||(29835736-29835857)
chr7 (71-156)||(34546376-34546461)
chr7 (54-159)||(37631601-37631706)
chr7 (71-181)||(4100562-4100671)
chr7 (71-185)||(28262070-28262179)
chr7 (56-157)||(27456174-27456275)
chr7 (77-184)||(22739868-22739976)
chr7 (76-165)||(18469993-18470081)
chr7 (71-185)||(23357743-23357854)
chr7 (76-163)||(36437421-36437507)
chr7 (71-142)||(3021930-3022000)
chr7 (76-186)||(18220703-18220812)
chr7 (76-129)||(4087667-4087720)
chr7 (94-174)||(13556474-13556553)
chr7 (82-165)||(20116940-20117022)
chr7 (107-170)||(47118037-47118100)
chr7 (76-147)||(18220510-18220580)
chr7 (76-125)||(18220624-18220673)
[»] chr6 (39 HSPs)
chr6 (54-185)||(1391211-1391342)
chr6 (25-185)||(23629609-23629769)
chr6 (54-185)||(392118-392249)
chr6 (54-185)||(4215717-4215848)
chr6 (71-185)||(2580991-2581105)
chr6 (51-185)||(32985226-32985360)
chr6 (49-185)||(29451148-29451284)
chr6 (74-185)||(961051-961162)
chr6 (71-185)||(12145150-12145264)
chr6 (72-185)||(32929541-32929654)
chr6 (54-185)||(2350674-2350805)
chr6 (58-181)||(5323426-5323549)
chr6 (54-185)||(23402160-23402291)
chr6 (54-185)||(35043912-35044042)
chr6 (72-194)||(3026033-3026155)
chr6 (71-185)||(25165446-25165560)
chr6 (54-180)||(26467162-26467288)
chr6 (72-185)||(3515806-3515919)
chr6 (56-185)||(7851192-7851321)
chr6 (65-185)||(34851882-34852002)
chr6 (56-179)||(18276654-18276777)
chr6 (29-185)||(13416992-13417152)
chr6 (71-185)||(28225260-28225373)
chr6 (71-185)||(29978271-29978385)
chr6 (72-191)||(12525759-12525878)
chr6 (71-166)||(21878399-21878494)
chr6 (54-185)||(27433514-27433645)
chr6 (57-185)||(11115130-11115256)
chr6 (71-143)||(34396602-34396674)
chr6 (56-156)||(20897972-20898072)
chr6 (56-156)||(34477612-34477712)
chr6 (58-185)||(1840280-1840407)
chr6 (53-131)||(13529476-13529554)
chr6 (73-167)||(31280362-31280456)
chr6 (71-166)||(9661025-9661120)
chr6 (100-163)||(24227443-24227506)
chr6 (150-191)||(22417311-22417352)
chr6 (76-123)||(10431780-10431827)
chr6 (53-103)||(14559943-14559993)
[»] chr1 (57 HSPs)
chr1 (71-185)||(3097698-3097812)
chr1 (58-185)||(3784746-3784873)
chr1 (54-185)||(6770359-6770490)
chr1 (71-194)||(8472938-8473061)
chr1 (59-180)||(38335196-38335317)
chr1 (36-185)||(48071486-48071635)
chr1 (30-185)||(38162847-38163003)
chr1 (54-185)||(18043184-18043315)
chr1 (58-185)||(47010019-47010146)
chr1 (55-185)||(15227762-15227892)
chr1 (71-185)||(30294414-30294528)
chr1 (71-185)||(43286761-43286875)
chr1 (30-185)||(5694318-5694474)
chr1 (54-185)||(12072095-12072226)
chr1 (31-178)||(17333322-17333469)
chr1 (54-185)||(24178496-24178627)
chr1 (54-185)||(42770023-42770154)
chr1 (71-194)||(50128196-50128319)
chr1 (54-185)||(51065781-51065912)
chr1 (57-185)||(9266761-9266889)
chr1 (54-185)||(29683217-29683349)
chr1 (54-185)||(30657630-30657755)
chr1 (57-185)||(36446358-36446485)
chr1 (54-185)||(29657793-29657924)
chr1 (55-185)||(41730328-41730461)
chr1 (83-185)||(13961262-13961364)
chr1 (54-185)||(38701970-38702097)
chr1 (71-185)||(45431317-45431431)
chr1 (54-185)||(48383144-48383275)
chr1 (54-185)||(52749624-52749755)
chr1 (71-185)||(19031848-19031962)
chr1 (71-185)||(47532704-47532817)
chr1 (36-185)||(35985654-35985803)
chr1 (75-185)||(12306961-12307070)
chr1 (72-185)||(14350311-14350423)
chr1 (76-185)||(37315301-37315409)
chr1 (72-185)||(51368818-51368931)
chr1 (29-185)||(45449277-45449433)
chr1 (54-156)||(29210435-29210537)
chr1 (71-155)||(39497346-39497430)
chr1 (71-185)||(15282551-15282661)
chr1 (76-185)||(30217806-30217915)
chr1 (76-165)||(3838831-3838919)
chr1 (76-139)||(26228237-26228300)
chr1 (83-185)||(52431632-52431734)
chr1 (76-163)||(35700707-35700792)
chr1 (78-180)||(37503260-37503361)
chr1 (52-134)||(39912363-39912445)
chr1 (71-165)||(23473517-23473611)
chr1 (76-186)||(39081845-39081954)
chr1 (76-165)||(16590269-16590356)
chr1 (71-116)||(10976004-10976049)
chr1 (54-106)||(19011108-19011160)
chr1 (127-185)||(19010720-19010778)
chr1 (94-128)||(19011057-19011091)
chr1 (71-150)||(28481883-28481957)
chr1 (116-161)||(14881036-14881081)
[»] scaffold0113 (1 HSPs)
scaffold0113 (65-194)||(40952-41081)
[»] scaffold1152 (1 HSPs)
scaffold1152 (65-185)||(711-831)
[»] scaffold0021 (1 HSPs)
scaffold0021 (54-185)||(116226-116357)
[»] scaffold0524 (1 HSPs)
scaffold0524 (71-185)||(864-978)
[»] scaffold0034 (1 HSPs)
scaffold0034 (60-185)||(95618-95742)
[»] scaffold0264 (1 HSPs)
scaffold0264 (58-185)||(22987-23114)
[»] scaffold0190 (1 HSPs)
scaffold0190 (54-185)||(14918-15049)
[»] scaffold0263 (1 HSPs)
scaffold0263 (71-194)||(19609-19732)
[»] scaffold1266 (1 HSPs)
scaffold1266 (56-186)||(316-446)
[»] scaffold0038 (1 HSPs)
scaffold0038 (71-185)||(25758-25871)
[»] scaffold0325 (1 HSPs)
scaffold0325 (71-185)||(17504-17617)
[»] scaffold0188 (1 HSPs)
scaffold0188 (55-185)||(6143-6273)
[»] scaffold0050 (2 HSPs)
scaffold0050 (71-185)||(69265-69378)
scaffold0050 (36-193)||(33707-33863)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-185)||(53718-53849)
[»] scaffold0002 (1 HSPs)
scaffold0002 (71-186)||(146937-147052)
[»] scaffold0425 (1 HSPs)
scaffold0425 (94-185)||(10772-10863)
[»] scaffold0014 (1 HSPs)
scaffold0014 (54-185)||(68323-68454)
[»] scaffold0206 (1 HSPs)
scaffold0206 (71-156)||(11032-11117)
[»] scaffold0674 (1 HSPs)
scaffold0674 (56-156)||(7959-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (56-156)||(7312-7412)
[»] scaffold0007 (1 HSPs)
scaffold0007 (97-185)||(233918-234006)
[»] scaffold1128 (1 HSPs)
scaffold1128 (76-123)||(1415-1462)
[»] scaffold0533 (1 HSPs)
scaffold0533 (65-129)||(5072-5136)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 42548073 - 42548334
Alignment:
Q  10 attatactcctaaaatatgatatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaa 109  Q
    ||||||||||||||||||||||||| ||||| || || |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  42548073 attatactcctaaaatatgatatgggaaatgctagccgatgcctcgaggcactgcttaaagatatgaaaaaagaaattatatagtagttaatgcattgaa 42548172  T
Q  110 attatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaattagtg-tccgagataccggtt-- 206  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||  |||| |||| || |||||||      
T  42548173 attatgtaattaatttataataaagtcaaaaataatttcattttatggtaataattcccttttatggtatgcttaaccagtgctccgggacaccggttag 42548272  T
Q  207 -----------atatttattgatttattcattttcttatacataggaatatttcttattcca 257  Q
               ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42548273 caaaccctgtaatatttattgatttaatcattttcttatacataggaatatttcttattcca 42548334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 49893353 - 49893490
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||  ||||    
T  49893353 cggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaaacagtttcctttt 49893452  T
Q  154 atgataataattctcttttatggtatgcttaattagtg 191  Q
    ||| ||||||||| ||||||||||||||||||| ||||    
T  49893453 atggtaataattcccttttatggtatgcttaatcagtg 49893490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 40362763 - 40362613
Alignment:
Q  36 aaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaag 134  Q
    ||||| |||||| |||||| ||||||||| ||||  |||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  40362763 aaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaag 40362664  T
Q  135 tcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  40362663 tcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaa 40362613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 272242 - 272374
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||  ||||    
T  272242 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttcctttt 272341  T
Q  154 atgataataattctcttttatggtatgcttaat 186  Q
    ||| ||||||||| |||||||||||||||||||    
T  272342 atggtaataattcccttttatggtatgcttaat 272374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 4168205 - 4168336
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||| |||| ||||  |||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  4168205 cggggaactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagttttctttt 4168304  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  4168305 atggtaataattctcttttatggtatgcttaa 4168336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 10617466 - 10617317
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    |||||||||||  |||| | || ||||| ||||  |||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  10617466 aaatgttaaccggtgcccccggacactgattaaggatataaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaagt 10617367  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||  ||||||| ||||||||| ||||||||||||||||||    
T  10617366 caaaaacaatttccttttatggtaataattcccttttatggtatgcttaa 10617317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 41554109 - 41553973
Alignment:
Q  49 tgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaatttt 148  Q
    |||| ||| |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  41554109 tgccccggtgcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttc 41554010  T
Q  149 attttatgataataattctcttttatggtatgcttaa 185  Q
     ||||||| |||||||| | |||||||||||||||||    
T  41554009 cttttatggtaataattattttttatggtatgcttaa 41553973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 52520703 - 52520834
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  52520703 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 52520802  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||| |||||||||||||||||    
T  52520803 atggtaataattctattttatggtatgcttaa 52520834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 53489988 - 53489857
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  53489988 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 53489889  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||| |||||||||||||||||    
T  53489888 atgataataattctattttatggtatgcttaa 53489857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 48725294 - 48725424
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||||||| |||  |||||    
T  48725294 ggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 48725393  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  48725394 tggtaataattcccttttatggtatgcttaa 48725424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 2119450 - 2119577
Alignment:
Q  51 cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttat 150  Q
    ||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||  |    
T  2119450 cctcgaggcactggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgagtaattaatttataataaagtcaaaaacaatttcct 2119549  T
Q  151 tttatgataataattctcttttatggtatg 180  Q
    |||||| ||||||||| |||||||||||||    
T  2119550 tttatg-taataattc-cttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 2938198 - 2938073
Alignment:
Q  60 actgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgata 159  Q
    |||| ||||| |||| |||||| |||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||    
T  2938198 actggttaaagatataaaaaagaaaattatatagtagttaatgcactgaaattgtgtgattaatttataataaagtcaaaaacaatttcattttatggta 2938099  T
Q  160 ataattctcttttatggtatgcttaa 185  Q
    ||||||| ||||||||||||||||||    
T  2938098 ataattcacttttatggtatgcttaa 2938073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 29241676 - 29241792
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||  ||    
T  29241676 atatgaaaatggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattctttttatgataataattccgtt 29241775  T
Q  171 ttatggtatgcttaatt 187  Q
    |||| ||||||||||||    
T  29241776 ttatagtatgcttaatt 29241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 43786868 - 43787024
Alignment:
Q  30 tatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| ||||| |||||  |||||| ||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  43786868 tatgggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 43786967  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||  ||||||||| |||  ||||||| |||||||||| |||||||||||||||||    
T  43786968 ataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaa 43787024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 41993766 - 41993648
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||| ||||||||||||||    
T  41993766 atattaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataattctctt 41993668  T
Q  171 ttatggtatgcttaattagt 190  Q
    ||||||||||||||| ||||    
T  41993667 ttatggtatgcttaactagt 41993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 42964413 - 42964282
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||| |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  42964413 cggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctttt 42964314  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||  ||||||||| |||||||| |||||||||    
T  42964313 atagtaataattcacttttatgatatgcttaa 42964282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 46352656 - 46352787
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||    
T  46352656 cggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcctttt 46352755  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  46352756 atggtaataattcccttttatggtatgcttaa 46352787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 858628 - 858742
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||  ||||||| ||||||||  |||    
T  858628 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataatttcctt 858727  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  858728 ttatggtatgcttaa 858742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 7468452 - 7468569
Alignment:
Q  73 atgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttt 172  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| || |||| |||||||||||||| || |||||    
T  7468452 atgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatgataataa-tccctttt 7468550  T
Q  173 atggtatgcttaattagtg 191  Q
    |||||||||||||| ||||    
T  7468551 atggtatgcttaatcagtg 7468569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 18014694 - 18014831
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||| |||||||||  ||||||||||| ||||||| |||  ||||    
T  18014694 cggggcactgattaaggatatgaaaaagtaaattatatagtagttaatgcattgaaattgtgtaattaaactataataaagttaaaaacagtttcctttt 18014793  T
Q  154 atgataataattctcttttatggtatgcttaattagtg 191  Q
    ||||||||||||  ||||||||||||||||||| ||||    
T  18014794 atgataataatttccttttatggtatgcttaatcagtg 18014831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 52246604 - 52246749
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaa-ttttattt 152  Q
    |||||||||| ||||  |||||||||| ||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||    
T  52246604 cggggcactggttaaggatatgaaaaatgaaattatatagttgttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttttttt 52246703  T
Q  153 tatgataataattctcttttatggtatgcttaattagtgtccgaga 198  Q
    |||  ||||||||  |||||||||||||||||| ||||| ||||||    
T  52246704 tatagtaataatttccttttatggtatgcttaactagtgcccgaga 52246749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 49529457 - 49529299
Alignment:
Q  30 tatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagt---taatgcattgaaattatgtaattaattta 126  Q
    ||||||||||| ||| |  |||| |||||||||| ||||  ||||||||||| |||||||||| ||||   |||||||||||||||||||||||||||||    
T  49529457 tatggaaaatgataatcggtgccccggggcactgattaaggatatgaaaaagaaaattatatactagtagttaatgcattgaaattatgtaattaattta 49529358  T
Q  127 taataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||| |||  ||||||| ||||||||  ||||||||||||| ||||    
T  49529357 taataaagtcaaaaacattttccttttatggtaataatttccttttatggtatgtttaa 49529299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 38852253 - 38852370
Alignment:
Q  71 atatgaaaaaggaaattatataatagt---taatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattct 167  Q
    |||| ||||| ||||||||||| ||||   ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  38852253 atataaaaaatgaaattatatagtagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataataattca 38852352  T
Q  168 cttttatggtatgcttaa 185  Q
    ||||||||||||| ||||    
T  38852353 cttttatggtatgtttaa 38852370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 39074441 - 39074571
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||| |||  ||||    
T  39074441 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtc-aaaacagtttcctttt 39074539  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  39074540 atggtaataattcccttttatggtatgcttaa 39074571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 2505382 - 2505502
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||| | |||  ||||||| |||||||    
T  2505382 ttaaagatatgaaaaaggaaattatatagtagttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaataat 2505481  T
Q  165 tctcttttatggtatgcttaa 185  Q
    || ||||||||||||| ||||    
T  2505482 tcccttttatggtatgtttaa 2505502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 20924014 - 20924154
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||  ||||||||| |||  ||||    
T  20924014 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaattcattgaaattgtgtaattaatttataataatatcaaaaacagtttcctttt 20924113  T
Q  154 atgataataattctcttttatggtatgcttaattagtgtcc 194  Q
    | | |||||||||||||||||||||| |||||  |||||||    
T  20924114 aaggtaataattctcttttatggtatacttaaccagtgtcc 20924154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 22248925 - 22249037
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||| || ||||||||| ||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| |||    
T  22248925 atatgaaaaaggaaattatatagtagttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattccctt 22249024  T
Q  171 ttatggtatgctt 183  Q
    |||| ||||||||    
T  22249025 ttatagtatgctt 22249037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 24488389 - 24488525
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| |||| ||| | |||||||||||||||||||||||||||||| |||||  ||||||||||| |||||||| ||||||||| |||  |||||    
T  24488389 ggggcactggttaagaatgtaaaaaaggaaattatataatagttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttcttttta 24488488  T
Q  155 tgataataattctcttttatggtatgcttaattagtg 191  Q
    || |||||||||||||||||| |||||| || |||||    
T  24488489 tggtaataattctcttttatgatatgctgaactagtg 24488525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 11308354 - 11308244
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| | |||  ||||||| ||||||||| ||||||    
T  11308354 tgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaataattc-ctttta 11308256  T
Q  174 tggtatgcttaa 185  Q
    ||||||||||||    
T  11308255 tggtatgcttaa 11308244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 43269922 - 43269772
Alignment:
Q  36 aaatgttaacccatgcct-cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaag 134  Q
    |||||||||||  ||||| ||| |||||| ||||  ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||     
T  43269922 aaatgttaaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagttaatgcattgaaattatgtaattaatttataataaaa 43269823  T
Q  135 tcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||| ||| |||  ||||||  |||||||| || ||||||||||||||||    
T  43269822 tcaaacacagtttccttttatagtaataattatcctttatggtatgcttaa 43269772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 50299103 - 50298978
Alignment:
Q  60 actgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgata 159  Q
    |||| ||||| |||| |||| | |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||  ||||||||||    
T  50299103 actgattaaagatataaaaaggaaaattatatagtagttaatgcactgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatgata 50299004  T
Q  160 ataattctcttttatggtatgcttaa 185  Q
    ||||||| || ||||||||| |||||    
T  50299003 ataattcactcttatggtatacttaa 50298978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 6842676 - 6842772
Alignment:
Q  89 tataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| | ||||||||||||||||    
T  6842676 tataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaa 6842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 41304027 - 41304156
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||||| || ||||  |||||||||||||||||||||| || ||||||||||||||||  |||||||||| |||||||||||||||||| |||  ||||    
T  41304027 cggggcagtggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaatt--gtaattaattgataataaagtcaaaaacagtttcctttt 41304124  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||  ||||||||||||||||||    
T  41304125 atggtaataatttccttttatggtatgcttaa 41304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 13159936 - 13160051
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||| |||| | ||| | ||||||||   ||    
T  13159936 atatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttcttt 13160035  T
Q  171 ttatggtatgcttaat 186  Q
    ||||||||||||||||    
T  13160036 ttatggtatgcttaat 13160051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 33140937 - 33141039
Alignment:
Q  84 aattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgctt 183  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| || |||| ||||||| ||||||||| |||||||| |||||||    
T  33140937 aattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgctt 33141036  T
Q  184 aat 186  Q
    |||    
T  33141037 aat 33141039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 50359321 - 50359210
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgct 182  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |||| |||| || |||||||| |||| |||||||||||    
T  50359321 aaattatatagtagttaatgcattgaaattgggtaattaatatataataaagtcaaaaacagttttcttttgtggtaataattatcttctatggtatgct 50359222  T
Q  183 taattagtgtcc 194  Q
    |||  |||||||    
T  50359221 taaccagtgtcc 50359210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 50395709 - 50395595
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||| | |||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||  ||||||| |||||||||||||    
T  50395709 atatgaaaaagaaaattatacagtagttaatgcatagaaattgtgtaattaattgataataaagtc-aaaacaatttccttttatggtaataattctctt 50395611  T
Q  171 ttatggtatgcttaat 186  Q
    ||||| |||| |||||    
T  50395610 ttatgatatgattaat 50395595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 28139348 - 28139462
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||  ||  ||||||| ||||||||| |||    
T  28139348 atatgaaaaaagaaattaaatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagattccttttatggtaataattccctt 28139447  T
Q  171 ttatggtatgcttaa 185  Q
    ||||||||| |||||    
T  28139448 ttatggtatacttaa 28139462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 31514830 - 31514943
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||  |||||||||| ||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||| ||||||  ||||||||  |||    
T  31514830 atatgaaaaataaaattatatagtagttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaatttt-ttttatagtaataatttcctt 31514928  T
Q  171 ttatggtatgcttaa 185  Q
    |||| |||| |||||    
T  31514929 ttatagtatacttaa 31514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 42548408 - 42548453
Alignment:
Q  331 gaaacaaaggattttgtattgatttaaggcacgatcacggtgaaag 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42548408 gaaacaaaggattttgtattgatttaaggcacgatcacggtgaaag 42548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 2362880 - 2362955
Alignment:
Q  80 aggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||| |||||||| ||||||||| |||| |||||||    
T  2362880 aggaaattatata-tagttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatg 2362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 52552549 - 52552620
Alignment:
Q  107 gaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtat 179  Q
    |||||| ||||||||||||||||||||||||||||| | | | ||||||| ||||||||||||||||||||||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaac-agtatcttttatggtaataattctcttttatggtat 52552620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 2391630 - 2391687
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaatt 112  Q
    ||||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||||    
T  2391630 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaatt 2391687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 2393391 - 2393448
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaatt 112  Q
    ||||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||||    
T  2393391 ggggcactggttaaggataagaaaaaggaaattatatagtagttaatgcattgaaatt 2393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 21010041 - 21010103
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 141  Q
    ||||||||||||||||| |||||||  |||||||||| | |||||||||||||| |||||||||||    
T  21010041 aaaaaggaaattatatagtagttaa--cattgaaattgtataattaatttataa-aaagtcaaaaa 21010103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 6842605 - 6842642
Alignment:
Q  94 tagttaatgcattgaaattatgtaattaatttataata 131  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6842605 tagttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 53054869 - 53054956
Alignment:
Q  97 ttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||| ||| ||||||| || |||||||||| ||||||  | || ||||||  |||||||||||||||||| ||||| ||||    
T  53054869 ttaatgcattgagattgtgtaatttatctataataaagccaaaaa-tagttcattttacaataataattctcttttatagtatgtttaa 53054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 6842636 - 6842674
Alignment:
Q  89 tataatagttaatgcattgaaattatgtaattaatttat 127  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  6842636 tataatagttaattcattgaaattgtgtaattaatttat 6842674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 52718206 - 52718252
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgta 117  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||    
T  52718206 atatgaaaaaggaaattatatagtagttaatacattaaaattgtgta 52718252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 23925302 - 23925359
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaat 111  Q
    ||||| |||| |||| ||||| ||||||||||||||||| || |||||||||| ||||    
T  23925302 cggggaactggttaagaatataaaaaaggaaattatatagtaattaatgcattaaaat 23925359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 6283551 - 6283715
Alignment:
Q  22 aaatatgatatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaatt 120  Q
    |||||| |||||| ||||| |||||  |||||| ||||||||  ||||| ||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  6283551 aaatataatatgggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatataataattaatgcattgaaattgtgtaatt 6283650  T
Q  121 aatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  6283651 aatttataataaagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaa 6283715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 40564548 - 40564437
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  40564548 tgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaataattctctttta 40564449  T
Q  174 tggtatgcttaa 185  Q
    ||||||||||||    
T  40564448 tggtatgcttaa 40564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 20175254 - 20175386
Alignment:
Q  59 cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgat 158  Q
    ||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  20175254 cactggttaaaaatataaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgat 20175353  T
Q  159 aataattctcttttatggtatgcttaattagtg 191  Q
    |||||||| |||||||  ||||||||| |||||    
T  20175354 aataattcccttttataatatgcttaactagtg 20175386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 187
Target Start/End: Complemental strand, 9721796 - 9721638
Alignment:
Q  30 tatggaaaatgttaacccatg-cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| |||||||||||  || |||||||  |||| |||| ||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||    
T  9721796 tatgggaaatgttaaccggtgtcctcgggctactggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtttaattaatttata 9721697  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaatt 187  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||    
T  9721696 ataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgtttaatt 9721638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 13661834 - 13661961
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  |||||||     
T  13661834 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatgg 13661933  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||||||||||||    
T  13661934 taataattctcttttatggtatgcttaa 13661961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 35132544 - 35132674
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||| ||||| ||||  |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||  |||    
T  35132544 cgggacactggttaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttt-cttt 35132642  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  35132643 atggtaataattctcttttatggtatgcttaa 35132674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 21547541 - 21547427
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| | ||||||||||| |    
T  21547541 atataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttaagttaataattctcat 21547442  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  21547441 ttatggtatgcttaa 21547427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 34650979 - 34650866
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||    
T  34650979 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttt 34650880  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  34650879 tatggtatgcttaa 34650866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 29 - 180
Target Start/End: Complemental strand, 39067125 - 39066973
Alignment:
Q  29 atatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataat-agttaatgcattgaaattatgtaattaatttat 127  Q
    |||| ||||||||||||| |||||||  | ||||| ||||  |||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||    
T  39067125 atatagaaaatgttaaccgatgcctcaagacactggttaaggatatgaaaaaagaaattatataattagttaatatattgaaattatgtaattaatttat 39067026  T
Q  128 aataaagtcaaaaacaattttattttatgataataattctcttttatggtatg 180  Q
    |||||||||||||||||| |  ||||||| |||||||||||||||||| ||||    
T  39067025 aataaagtcaaaaacaatatccttttatggtaataattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 12506336 - 12506449
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||  ||||||||||||||    
T  12506336 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttt 12506435  T
Q  172 tatggtatgcttaa 185  Q
    ||||| ||||||||    
T  12506436 tatggaatgcttaa 12506449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 11958131 - 11958000
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||| |||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||  ||||    
T  11958131 cggggcacaggttaaagatataaaaaaggaaattatatagtagttaatgcaatgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttt 11958032  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||| ||||||||    
T  11958031 atggtaataattcccttttatggcatgcttaa 11958000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 8787379 - 8787492
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||  |||||||||||||||||  |||    
T  8787379 tatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatgataataattccattt 8787478  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  8787479 tatggtatgcttaa 8787492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 35504386 - 35504273
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||   |||||||  |||||||| ||||    
T  35504386 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttcccttttatggcaataattcccttt 35504287  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  35504286 tatggtatgcttaa 35504273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 4837261 - 4837364
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    |||||||||||  |||| |||||||| | |||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  4837261 aaatgttaaccggtgccccggggcaccggttaagaatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagt 4837360  T
Q  136 caaa 139  Q
    ||||    
T  4837361 caaa 4837364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 10054516 - 10054386
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||| |||  ||||    
T  10054516 cggggcactggttaagggtatgaaaaaggaaattatataataattaatgcattgaaattgtgtaattaatttataataatgtc-aaaacagtttcctttt 10054418  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||  |||||||||||| ||||    
T  10054417 atggtaataattcctttttatggtatgtttaa 10054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 11846111 - 11846225
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||  | |||  ||||||| |||||| || |||    
T  11846111 atataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaagtagtttccttttatggtaataaatccctt 11846210  T
Q  171 ttatggtatgcttaa 185  Q
    |||| ||||||||||    
T  11846211 ttatagtatgcttaa 11846225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 13470174 - 13470283
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||||||||| ||||| |||| |||||||||||||| | |||||||||||||||||||||||||||| |||  |||||    
T  13470174 ggggcactggttaaggatatgaaaaaggaaataatatagtagtcaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctttta 13470273  T
Q  155 tgataataat 164  Q
    || |||||||    
T  13470274 tggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 31909635 - 31909779
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    |||||||||||  |||||| ||  |||| ||||  |||| |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  31909635 aaatgttaaccggtgcctccggatactggttaaggatattaaaagggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagt 31909734  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||      |||  ||||||||||| |||||||||||||||||||    
T  31909735 caaaaaca-----gtttcctgataataattttcttttatggtatgcttaa 31909779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 19437022 - 19436876
Alignment:
Q  33 ggaaaatgttaacccatgcctcgggg-cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataata 131  Q
    |||||||||||||| ||| ||| ||| ||||  ||||  |||||||||||||||||||||| | ||||| ||||||||||| | |||||||||||| |||    
T  19437022 ggaaaatgttaaccgatgtctctgggacactcgttaaggatatgaaaaaggaaattatatagtggttaaagcattgaaattgtataattaatttat-ata 19436924  T
Q  132 aagtcaaaaacaattttattttatgataataattctcttttatggtatg 180  Q
    |||| ||||| | |||| ||||||| |||||||||||||||||||||||    
T  19436923 aagttaaaaatagtttt-ttttatggtaataattctcttttatggtatg 19436876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 10069991 - 10070092
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||||||| |||  ||||    
T  10069991 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaacagtttcttttt 10070089  T
Q  154 atg 156  Q
    |||    
T  10070090 atg 10070092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 19647822 - 19647720
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||  ||||    
T  19647822 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcataaacagtttcctttt 19647723  T
Q  154 atg 156  Q
    |||    
T  19647722 atg 19647720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 10955997 - 10956104
Alignment:
Q  77 aaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatgg 176  Q
    |||||| ||||||| | ||||||||||||||||||| | |||||||||||||| |||||||||||||||||  ||||||| ||||||||  ||||||||     
T  10955997 aaaagggaattataaagtagttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatga 10956095  T
Q  177 tatgcttaa 185  Q
    |||||||||    
T  10956096 tatgcttaa 10956104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 40057346 - 40057450
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||| |||||||||||  | |||||||||||||||||| |||||| || |||| ||||||  ||||| ||| |||    
T  40057346 atatgaaaaaggaaattatatagtagttagtgcattgaaatagtataattaatttataataaaatcaaaagcagttttcttttatagtaatatttccctt 40057445  T
Q  171 ttatg 175  Q
    |||||    
T  40057446 ttatg 40057450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 39069425 - 39069527
Alignment:
Q  77 aaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataa-agtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||   ||||||||  || |||||||||||  ||||||| ||||||||||||||||||    
T  39069425 aaaaggaaattatatagtagttaatgcattaaaattgtgtaatta---tataataattgtgaaaaacaatttccttttatggtaataattctcttttatg 39069521  T
Q  176 gtatgc 181  Q
     |||||    
T  39069522 atatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 2619704 - 2619635
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaa 140  Q
    ||||||||||| ||||||| || ||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  2619704 atatgaaaaagaaaattatttagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaa 2619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 4268624 - 4268714
Alignment:
Q  94 tagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||| |||||||||||||||| ||| | ||||||| |||  ||||||| |||||||| |||||| ||||||||||||    
T  4268624 tagttaatgcattaaaattgtgtaattaatttataa-aaaataaaaaacagtttccttttatggtaataattttcttttttggtatgcttaa 4268714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 6284839 - 6284892
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataa 129  Q
    ||||||||||||||||| || |||||| ||||||||| | ||||||||||||||    
T  6284839 aaaaaggaaattatatagtaattaatgtattgaaattgtataattaatttataa 6284892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 36395132 - 36395252
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  36395132 ttaaaaatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataataat 36395231  T
Q  165 tctcttttatggtatgcttaa 185  Q
    || ||||||||||||||||||    
T  36395232 tcccttttatggtatgcttaa 36395252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 32217067 - 32217197
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  32217067 cggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttt-tttt 32217165  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||||||||    
T  32217166 atgataataattcccttttatggtatgcttaa 32217197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 12356283 - 12356397
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  12356283 atatgaaaaaggaaattatatagtagttaatacattgaaattatataattaatttataataaagtcaaaaacagtttccttttatgataataattctctt 12356382  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  12356383 ttatggtatgcttaa 12356397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 4220193 - 4220347
Alignment:
Q  31 atggaaaatgttaacccatgcct-cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataa 129  Q
    |||| ||||| ||||| |||||| ||||| || | ||||  |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  4220193 atgggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa 4220292  T
Q  130 taaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  4220293 taaagtcaaaaacaattttcttttatg-taataattcccttttatggtatgcttaa 4220347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 46148977 - 46149092
Alignment:
Q  70 aatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctct 169  Q
    |||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  46148977 aatatgaaaaaggaaattatataataattaatacattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataattctct 46149076  T
Q  170 tttatggtatgcttaa 185  Q
    ||||||||||| ||||    
T  46149077 tttatggtatgtttaa 46149092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 54656039 - 54655900
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  54656039 ggggcactggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttctttta 54655940  T
Q  155 tgataataattctcttttatggtatgcttaattagtgtcc 194  Q
     |||||||||||||| ||||| |||||||||  |||||||    
T  54655939 ggataataattctctcttatgatatgcttaaccagtgtcc 54655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 30154310 - 30154196
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||  || ||||||||||||||||||    
T  30154310 atatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctctt 30154211  T
Q  171 ttatggtatgcttaa 185  Q
    ||||||| |||||||    
T  30154210 ttatggtgtgcttaa 30154196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 29591211 - 29591348
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||  ||||    
T  29591211 cggggcactggttaagaatatgaataaggaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtcaaaaacagtttcctttt 29591310  T
Q  154 atgataataattctcttttatggtatgcttaattagtg 191  Q
    ||| ||||||||  |||||||||||||||||| |||||    
T  29591311 atggtaataattaccttttatggtatgcttaactagtg 29591348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 47232016 - 47231905
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  47232016 tgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttccttttatgataataattccctttta 47231917  T
Q  174 tggtatgcttaa 185  Q
    ||||||| ||||    
T  47231916 tggtatgtttaa 47231905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 50619108 - 50619239
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||  ||||    
T  50619108 cggggcactgattaagaatatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttcctttt 50619207  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  50619208 atggtaataattcccttttatggtatgcttaa 50619239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 24679808 - 24679675
Alignment:
Q  52 ctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatt 151  Q
    |||||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||  |    
T  24679808 ctcggggcactggttaaggatatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaaacaa-tttcct 24679710  T
Q  152 ttatgataataattctcttttatggtatgcttaat 186  Q
    ||||| |||||||||||||||||||||||||||||    
T  24679709 ttatggtaataattctcttttatggtatgcttaat 24679675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 789676 - 789563
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||    
T  789676 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttt 789577  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  789576 tatggtatgcttaa 789563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 32202669 - 32202513
Alignment:
Q  30 tatggaaaatgttaacccatg-cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| |||||||||||  || || |||||||| | ||||  |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  32202669 tatgggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttata 32202570  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaat 186  Q
    ||||||||||||||| |||  ||||||||||||||||| |||||||| ||||||||||    
T  32202569 ataaagtcaaaaacagtttccttttatgataataattc-cttttatgatatgcttaat 32202513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 3783690 - 3783534
Alignment:
Q  30 tatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| ||||| |||||  |||||| ||||||| | ||||| |||||||||| ||||||||||| ||||||||||||| ||||| | ||||||||| |||    
T  3783690 tatgggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagttaatgcattaaaattgtttaattaattgata 3783591  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||    
T  3783590 ataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 53656025 - 53655905
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||   ||    
T  53656025 atatgaaaaaagaaattatataatagttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataatttcatt 53655926  T
Q  171 ttatggtatgcttaattagtg 191  Q
    |||||||||||||||| ||||    
T  53655925 ttatggtatgcttaatcagtg 53655905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 54 - 194
Target Start/End: Original strand, 54897330 - 54897470
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||    
T  54897330 cggggcactggttaaggatatgagaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttcctttt 54897429  T
Q  154 atgataataattctcttttatggtatgcttaattagtgtcc 194  Q
    ||| ||||||||  ||||||||||||| ||||  |||||||    
T  54897430 atggtaataatttccttttatggtatgtttaaccagtgtcc 54897470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 4268986 - 4268855
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||    
T  4268986 cggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcttttt 4268887  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||| ||||    
T  4268886 atggtaataattcccttttatggtatgattaa 4268855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 19503252 - 19503133
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| |||  ||||||  ||||||||| |||    
T  19503252 atatgaaaaaggaaattatatactagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttattgtaataattccctt 19503153  T
Q  171 ttatggtatgcttaattagt 190  Q
    ||||||||||||||| ||||    
T  19503152 ttatggtatgcttaactagt 19503133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 39843946 - 39844061
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||  ||    
T  39843946 atatgaaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattccttt 39844045  T
Q  171 ttatggtatgcttaat 186  Q
    ||| ||||||||||||    
T  39844046 ttagggtatgcttaat 39844061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 43944529 - 43944660
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  43944529 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 43944628  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||| ||||||||||||||    
T  43944629 atggtaataattcccttgtatggtatgcttaa 43944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 4089165 - 4089295
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||   |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  |||||    
T  4089165 ggggcactgattaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttta 4089264  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||||||||||||||||| ||||    
T  4089265 tggtaataattctcttttatggtatgtttaa 4089295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 33108855 - 33108706
Alignment:
Q  36 aaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaag 134  Q
    |||||||||||  |||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||||    
T  33108855 aaatgttaaccggtgcctccggggcactggttaaga-tatgaaaaaggaaattatataatagttaatgcattgaaatagtataattaattgataataaag 33108757  T
Q  135 tcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||| |||  ||||||| |||||||||  |||||||||||||||||    
T  33108756 tcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaa 33108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 16536088 - 16536201
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| |||||||||| |||    
T  16536088 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctattt 16536187  T
Q  172 tatggtatgcttaa 185  Q
    |||||||| |||||    
T  16536188 tatggtattcttaa 16536201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 43202529 - 43202416
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  43202529 tatgaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattctcttt 43202430  T
Q  172 tatggtatgcttaa 185  Q
    ||||||| ||||||    
T  43202429 tatggtaagcttaa 43202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 50603272 - 50603381
Alignment:
Q  77 aaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaaca-attttattttatgataataattctcttttatg 175  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||    
T  50603272 aaaaggaaattgtataataattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatg 50603371  T
Q  176 gtatgcttaa 185  Q
    ||||||||||    
T  50603372 gtatgcttaa 50603381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 42898908 - 42898777
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta- 154  Q
    |||||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||  |||||     
T  42898908 gggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttttat 42898809  T
Q  155 -tgataataattctcttttatggtatgcttaa 185  Q
     || ||||||||||||||||||||||||||||    
T  42898808 gtggtaataattctcttttatggtatgcttaa 42898777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 6164138 - 6164246
Alignment:
Q  77 aaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatgg 176  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||| |||  ||||||| |||||||||||||||||||    
T  6164138 aaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatgg 6164237  T
Q  177 tatgcttaa 185  Q
    |||||||||    
T  6164238 tatgcttaa 6164246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 7768960 - 7769091
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| || ||||||| |||  ||||    
T  7768960 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttcctttt 7769059  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||| || |||||    
T  7769060 atggtaataattctcttttatggcatacttaa 7769091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 54945941 - 54945812
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  ||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  54945941 ggggcactggttaaggatatgaaaaaggaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgtttta 54945842  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || | |||||||  ||||||||||| |||||    
T  54945841 tggt-ataattcctttttatggtatacttaa 54945812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 28755644 - 28755772
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| | ||||| |||  ||||||    
T  28755644 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagttagaaacagtttccttttat 28755743  T
Q  156 gataataattctcttttatggtatgcttaa 185  Q
    ||||||| ||| ||||||| ||||||||||    
T  28755744 gataatacttc-cttttatagtatgcttaa 28755772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 37987975 - 37988088
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| || ||||||| |||  ||||||  ||||||||||||||    
T  37987975 tatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttattgtaataattctcttt 37988074  T
Q  172 tatggtatgcttaa 185  Q
    ||| ||||||||||    
T  37988075 tatagtatgcttaa 37988088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 53268764 - 53268872
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||| ||    
T  53268764 aaaaaagaaattatatattagttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttg 53268862  T
Q  176 gtatgcttaa 185  Q
    ||||||||||    
T  53268863 gtatgcttaa 53268872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 15186265 - 15186389
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  15186265 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 15186364  T
Q  154 atgataataattctcttttatggta 178  Q
    ||| |||||||||  ||||||||||    
T  15186365 atggtaataattccattttatggta 15186389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 30387270 - 30387166
Alignment:
Q  82 gaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgc 181  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| |||||||||  ||||||| |||||    
T  30387270 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgc 30387171  T
Q  182 ttaat 186  Q
    |||||    
T  30387170 ttaat 30387166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 18068043 - 18067912
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |||| |||||||| | |||  ||||    
T  18068043 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttcctttt 18067944  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||| ||||    
T  18067943 atggtaataattcccttttatggtatgtttaa 18067912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 31517217 - 31517319
Alignment:
Q  84 aattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaat-tttattttatgataataattctcttttatggtatgct 182  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||| ||||||| ||||||||||||| |||||||||||    
T  31517217 aattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgct 31517316  T
Q  183 taa 185  Q
    |||    
T  31517317 taa 31517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 52533944 - 52533818
Alignment:
Q  59 cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgat 158  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||   ||||||||| ||||||||||| |||||| |||  ||||||| |    
T  52533944 cactggttaagaatatgaaaaaggaaattatatagtagttaatgcactgaaattgaataattaattgataataaagtcgaaaacagtttccttttatggt 52533845  T
Q  159 aataattctcttttatggtatgcttaa 185  Q
    |||||||| ||||||||||||| ||||    
T  52533844 aataattcccttttatggtatgtttaa 52533818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 31680609 - 31680496
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    |||||||||| || ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||| |||||||||  |||    
T  31680609 tatgaaaaagaaagttacataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaataattcatttt 31680510  T
Q  172 tatggtatgcttaa 185  Q
    |||| |||| ||||    
T  31680509 tatgatatgtttaa 31680496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 42815148 - 42815220
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaaca 143  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42815148 atatgaaaaaggaaattatatcatagttaatgtattgaaattatgtaattaatttataataaagtcaaaaaca 42815220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 55882706 - 55882835
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||  ||||  ||||||||||  |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  55882706 cggggcactcgttaaggatatgaaaaaa-aaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctttt 55882804  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||| ||||| |||||||||||| |||||    
T  55882805 atggtaa-aattcacttttatggtatacttaa 55882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 5091774 - 5091634
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| |||| |||||||||||  ||||||||||||| |||||  ||| ||||| |||||||||||||||||||||||| ||||| |||  ||||    
T  5091774 cggggcactggttaagaatatgaaaaataaaattatataataattaatatattaaaattgtgtaattaatttataataaagtcataaacagtttcctttt 5091675  T
Q  154 atgataataattctcttttatggtatgcttaattagtgtccg 195  Q
    ||  ||||||||| ||||||| ||||||||||  ||||||||    
T  5091674 atagtaataattcccttttat-gtatgcttaaccagtgtccg 5091634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 54054587 - 54054672
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||  |||||||    
T  54054587 atatgaaaaaagaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaacaatttccttttatg 54054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 39877371 - 39877288
Alignment:
Q  96 gttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtat 179  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  39877371 gttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtat 39877288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 52697091 - 52697214
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||  |||||||||| |||||||| |||| ||||||| |||| ||||||||||||||||||||| ||||||  |||||  |||||||||||||    
T  52697091 atatgaaaaacaaaattatatagtagttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaataattctctt 52697189  T
Q  171 ttatggtatgcttaattagtgtccg 195  Q
    ||||| |||| ||||  ||||||||    
T  52697190 ttatgatatgtttaacgagtgtccg 52697214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 49915185 - 49915301
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  ||||||||||| || ||||||| || |||||| ||||||||| |||||||||||||||||||||| ||||||| |||  |||||| |    
T  49915185 gcactgattaaggatatgaaaaagaaatttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataa 49915284  T
Q  158 taataattctcttttat 174  Q
    ||||||||  |||||||    
T  49915285 taataatttccttttat 49915301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 41265510 - 41265611
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgct 182  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||| ||| ||||||||| |||| ||||||  |||||||| |||||| ||||||| |    
T  41265510 aaattatatagtagttaatgcagtgaaattgtgtaattaatttataa-aaaatcaaaaacagttttcttttattgtaataattttcttttttggtatgtt 41265608  T
Q  183 taa 185  Q
    |||    
T  41265609 taa 41265611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 53004060 - 53003980
Alignment:
Q  114 tgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaattagtgtcc 194  Q
    |||||||||| ||||||||||||||||| |||||  |||||  ||||||||||||||||||| |||||||||| |||||||    
T  53004060 tgtaattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtcc 53003980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 46688345 - 46688283
Alignment:
Q  78 aaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaa 140  Q
    |||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  46688345 aaagaaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaa 46688283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 50167611 - 50167685
Alignment:
Q  52 ctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    |||||||||||| ||||| ||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||    
T  50167611 ctcggggcactggttaaagatatgaaaaagaaaattatag--tagttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 16820917 - 16821005
Alignment:
Q  97 ttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||| ||||||||| |||||||||||||| |  || |||  ||||||| ||||||||  ||||||||||||||||||    
T  16820917 ttaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaa 16821005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 8133789 - 8133850
Alignment:
Q  114 tgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    |||||||||||||||||||||||||||| | |||| ||||||| |||||||| |||||||||    
T  8133789 tgtaattaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttatg 8133850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 1432703 - 1432581
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||| |||||      || ||||||||||||||||| | |||||| | ||| |||||||    
T  1432703 ggcactggttaaggatatgaaaaaggaaattatataatagttaatacattg------tg-aattaatttataataaaataaaaaac-agtttcttttatg 1432612  T
Q  157 ataat--aattctcttttatggtatgcttaa 185  Q
    |||||  |||||||||||||  |||||||||    
T  1432611 ataataaaattctcttttataatatgcttaa 1432581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 17344800 - 17344683
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||| ||| | ||||| | |||  ||||||| |||||| | |||||| |     
T  17344800 aaaaatgaaattatataatagttaatgcatttaaattatataattaaattataa-aaatttaaaaaaagtttctttttatggtaataactttcttttctt 17344702  T
Q  176 gtatgcttaattagtgtcc 194  Q
    |||| |||||  |||||||    
T  17344701 gtatccttaaacagtgtcc 17344683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 6e-47; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 11112661 - 11112792
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  11112661 cgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctttt 11112760  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||||||||    
T  11112761 atgataataattcacttttatggtatgcttaa 11112792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 27988663 - 27988532
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||    
T  27988663 cggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctttt 27988564  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  27988563 atggtaataattcccttttatggtatgcttaa 27988532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 28045965 - 28045834
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||    
T  28045965 cggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctttt 28045866  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  28045865 atggtaataattcccttttatggtatgcttaa 28045834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 43119236 - 43119370
Alignment:
Q  51 cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttat 150  Q
    ||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| |    
T  43119236 cctcggggcactgattaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttct 43119335  T
Q  151 tttatgataataattctcttttatggtatgcttaa 185  Q
    |||||| | ||||||||||||||||||||||||||    
T  43119336 tttatggtgataattctcttttatggtatgcttaa 43119370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 33357289 - 33357156
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||     
T  33357289 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgg 33357190  T
Q  158 taataattctcttttatggtatgcttaattagtg 191  Q
    |||||||||||||||||||||||||||| |||||    
T  33357189 taataattctcttttatggtatgcttaactagtg 33357156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 42035141 - 42035014
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  42035141 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgg 42035042  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||| ||||||||||||||||||    
T  42035041 taataattcccttttatggtatgcttaa 42035014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 33 - 194
Target Start/End: Complemental strand, 29444326 - 29444164
Alignment:
Q  33 ggaaaatgttaacccatgc-ctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataata 131  Q
    ||||||||||||||  ||| | |||||||||| ||||  |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  29444326 ggaaaatgttaaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagttaacgcattgaaattgtgtaattaatttataata 29444227  T
Q  132 aagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaattagtgtcc 194  Q
    |||||||||||| |||| ||||||| ||||||||| ||||||||||||| ||||  |||||||    
T  29444226 aagtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaaccagtgtcc 29444164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 13643034 - 13643164
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||    
T  13643034 cggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa-aaattcctttt 13643132  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  13643133 atggtaataattctcttttatggtatgcttaa 13643164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 13743459 - 13743589
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||    
T  13743459 cggggcactggttaaggatacgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa-aaattcctttt 13743557  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  13743558 atggtaataattctcttttatggtatgcttaa 13743589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 16394225 - 16394094
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||  ||||    
T  16394225 cggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcctttt 16394126  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  16394125 atgctaataattctcttttatggtatgcttaa 16394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 7304665 - 7304551
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  7304665 atatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataattctctt 7304566  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  7304565 ttatggtatgcttaa 7304551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 16888691 - 16888577
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  16888691 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctctt 16888592  T
Q  171 ttatggtatgcttaa 185  Q
    || ||||||||||||    
T  16888591 ttgtggtatgcttaa 16888577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 36730483 - 36730597
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  36730483 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctctt 36730582  T
Q  171 ttatggtatgcttaa 185  Q
    |||| ||||||||||    
T  36730583 ttatagtatgcttaa 36730597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 28626810 - 28626931
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  28626810 tgaaaaaggaaattatatagtagttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttctttttatgataataattccctttta 28626909  T
Q  174 tggtatgcttaattagtgtccg 195  Q
    ||||||||||||| ||||||||    
T  28626910 tggtatgcttaatcagtgtccg 28626931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 40831302 - 40831431
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  40831302 ggcactggttaaagatatgaaaaagaaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttcttttatg 40831401  T
Q  157 ataataattctcttttatggtatgcttaat 186  Q
     |||||||| |||||||| |||||| ||||    
T  40831402 gtaataattttcttttatagtatgcataat 40831431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 4537908 - 4537777
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||    
T  4537908 cggggcactggttaaggatataaaataggaaattatatagtagttaatgcattgaaattatgtaattaattgataataaagtcaaaaacagtttcctttt 4537809  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  4537808 atggtaataattcccttttatggtatgcttaa 4537777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 34228705 - 34228835
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||||||| |||  |||||    
T  34228705 ggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 34228804  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  34228805 tggtaataattcccttttatggtatgcttaa 34228835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 37373244 - 37373358
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||| ||||||| ||||||||| |||    
T  37373244 atatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaattgataataaagtcgaaaacagttttcttttatggtaataattccctt 37373343  T
Q  171 ttatggtatgcttaa 185  Q
    | |||||||||||||    
T  37373344 tcatggtatgcttaa 37373358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 2805450 - 2805293
Alignment:
Q  29 atatggaaaatgttaacccatgcctcgggg-cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttat 127  Q
    |||||| |||||||||||  |||| | ||| ||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||    
T  2805450 atatgggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaacctat 2805351  T
Q  128 aataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| || |||  ||||||| ||||||||| ||||||||||||||||||    
T  2805350 aataaagtcaaaagcagtttccttttatggtaataattcccttttatggtatgcttaa 2805293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 20831717 - 20831580
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||| || |||  ||||    
T  20831717 cgggacactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataataaagtcaaaagcagtttcctttt 20831618  T
Q  154 atgataataattctcttttatggtatgcttaattagtg 191  Q
    ||| ||||||||||||||||||||||||||||| ||||    
T  20831617 atggtaataattctcttttatggtatgcttaatcagtg 20831580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 168488 - 168619
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  168488 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 168587  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||  |||||||||||||||||    
T  168588 atggtaataattccattttatggtatgcttaa 168619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 9063212 - 9063085
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||     
T  9063212 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaatcgtgcaattaatttataataaagtcaaaaacaattttcttttatgg 9063113  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||| ||||| || |||||||||    
T  9063112 taataattcccttttgtgatatgcttaa 9063085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 30675736 - 30675606
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  30675736 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 30675637  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  30675636 atggtaataattc-cttttatggtatgcttaa 30675606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 12203894 - 12204004
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||||||||||||| ||||    
T  12203894 tatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttt 12203993  T
Q  172 tatggtatgct 182  Q
    |||||||||||    
T  12203994 tatggtatgct 12204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 12448322 - 12448432
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||||||||||||| ||||    
T  12448322 tatgaaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttt 12448421  T
Q  172 tatggtatgct 182  Q
    |||||||||||    
T  12448422 tatggtatgct 12448432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 16890627 - 16890513
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||  ||||||| |||||||||  ||    
T  16890627 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattccttt 16890528  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  16890527 ttatggtatgcttaa 16890513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 16785110 - 16785239
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||| |||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||||| |||  ||||||    
T  16785110 gggcactggttaaggatatgaaaaaagaaattatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat 16785209  T
Q  156 gataataattctcttttatggtatgcttaa 185  Q
     |||||||||||||||||||||||| ||||    
T  16785210 aataataattctcttttatggtatgattaa 16785239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 4648216 - 4648347
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||| |||  |||     
T  4648216 cggggcactgattaaggatatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataatgtcaaaaacagtttcttttg 4648315  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| |||||||| |||||||||    
T  4648316 atggtaataattcccttttatgatatgcttaa 4648347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 21595886 - 21596008
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| || |||||| ||||    
T  21595886 tatgaaaaaggaaattatataggagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtattaattcccttt 21595985  T
Q  172 tatggtatgcttaattagtgtcc 194  Q
    ||||||||||||||  |||||||    
T  21595986 tatggtatgcttaaccagtgtcc 21596008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 34192813 - 34192899
Alignment:
Q  70 aatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  34192813 aatatgaaaaaggaaattatatactagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaataattttattttatg 34192899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 9254065 - 9253935
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||| |||||| |||| ||||||||||||||||||| ||||||||| | |||||||||||||||||| |||  ||||    
T  9254065 cggggcactggttaaggatatgaaaaatgaaattttatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaacagtttcctttt 9253967  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||  ||||||||||||||||||||||||||||    
T  9253966 atagtaataattctcttttatggtatgcttaa 9253935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 3930395 - 3930266
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||  |||| ||||||||| ||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||||||||| |||  |||| |    
T  3930395 gggcactagttaataatatgaaagaggaaattatatagtagttaatgcattgaagttgtgtaattaattgataataaagtcaaaaacagtttcctttttt 3930296  T
Q  156 gataataattctcttttatggtatgcttaa 185  Q
    ||||||||||  |||||||| |||||||||    
T  3930295 gataataatttccttttatgatatgcttaa 3930266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 32113947 - 32114062
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattt-tattttatgataataattctct 169  Q
    |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||| |||   ||||||||||||||||| ||    
T  32113947 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataataattccct 32114046  T
Q  170 tttatggtatgcttaa 185  Q
    ||||| ||||| ||||    
T  32114047 tttatagtatgtttaa 32114062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 42433685 - 42433583
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||| ||||||||  ||||| ||    
T  42433685 aaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaacagttttcttttatggtaataatttccttttttg 42433587  T
Q  176 gtat 179  Q
    ||||    
T  42433586 gtat 42433583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 9278245 - 9278317
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtca 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9278245 ttaaagatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagtca 9278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 10870391 - 10870495
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| |||  ||||||| ||||||||| |||    
T  10870391 atataaaaaagaaaattatataatagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccctt 10870490  T
Q  171 ttatg 175  Q
    |||||    
T  10870491 ttatg 10870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 9537971 - 9537848
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||  | |||  ||||||  ||||||||  |||    
T  9537971 atatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaataatttcctt 9537872  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    |||||||||||||||  |||||||    
T  9537871 ttatggtatgcttaaccagtgtcc 9537848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 39406905 - 39407001
Alignment:
Q  95 agttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaattagtg 191  Q
    ||||||||| || ||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| |||| |||||    
T  39406905 agttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtg 39407001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 24843393 - 24843311
Alignment:
Q  104 attgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaat 186  Q
    ||||||||| ||||||||||||||||||||||||||| || |||  |||||||| ||||||||||||||||||||||||||||    
T  24843393 attgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaat 24843311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 17467642 - 17467737
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattc 166  Q
    |||||||||||||||||||  | || |||||||||||||||| ||||||||||| |||||||| |||||||||||||  |||||  ||||||||||    
T  17467642 atatgaaaaaggaaattatgcagtaattaatgcattgaaattgtgtaattaattgataataaaatcaaaaacaatttccttttactataataattc 17467737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 29235274 - 29235397
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||| ||||||||||| ||||||||||||| || || |||||||||||||||||||| ||||||| |  ||  ||||||||||||||||  |||    
T  29235274 atataaaaaaagaaattatatagtagttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataataatttcctt 29235373  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    |||| | ||||||||  |||||||    
T  29235374 ttataggatgcttaaccagtgtcc 29235397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 22956730 - 22956871
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| |||| | ||| ||||||||| | ||||  |||||||| |||| ||||||||||||||||||||||||| |||||||||| |||  ||||||    
T  22956730 gggcactggttaagagtataaaaaaggaa-tcatatggtagttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttccttttat 22956828  T
Q  156 gataataatt--ctcttttatggtatgcttaattagtgtccga 196  Q
    | ||| ||||  || |||||||||||| ||||| |||| ||||    
T  22956829 ggtaaaaattcccttttttatggtatgtttaataagtgcccga 22956871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 10618057 - 10618123
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtca 137  Q
    ||||||||||| |||||||||| ||||||||||| | ||||| ||||||||||| ||||||||||||    
T  10618057 atatgaaaaagaaaattatatagtagttaatgcaattaaattgtgtaattaattgataataaagtca 10618123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 14191103 - 14191049
Alignment:
Q  125 tataataaagtcaaaaacaattttattttatgataataattctcttttatggtat 179  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  14191103 tataataaaatcaaaaacagttttattttatgataataattctcttttatagtat 14191049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 30933453 - 30933376
Alignment:
Q  86 ttatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    ||||||| || |||||||||||||||| |||||||||||||||| ||||| ||||||| |||| ||||| |||||||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttataa-aaagttaaaaacatttttcttttacgataataat 30933376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 22451835 - 22451892
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 141  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||    
T  22451835 aaattatatagcagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaa 22451892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 12652656 - 12652707
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaa 109  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||    
T  12652656 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 36057992 - 36057904
Alignment:
Q  78 aaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataa--agtcaaaaacaattttattttatgataataatt 165  Q
    |||||||||||||| | |||||| | ||||||||| | |||||||||||||| ||  ||||||||| | |||| ||||||||||||||||    
T  36057992 aaaggaaattatattagagttaacg-attgaaattgtataattaatttataaaaagtagtcaaaaaaagttttcttttatgataataatt 36057904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 36923824 - 36923782
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagtta 99  Q
    ||||||| ||||  |||||||||||||||||||||||||||||    
T  36923824 ggcactgattaaggatatgaaaaaggaaattatataatagtta 36923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 37714044 - 37713990
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaa-ttatgtaattaatttataa 129  Q
    |||||| |||||| |||||||||| |||||||||| ||||||||||||| |||||    
T  37714044 aaaaagaaaattacataatagttattgcattgaaaattatgtaattaatctataa 37713990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 26387211 - 26387097
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  26387211 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattccctt 26387112  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  26387111 ttatggtatgcttaa 26387097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 561682 - 561550
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||  ||||    
T  561682 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcagtttcctttt 561583  T
Q  154 atgataataattctcttttatggtatgcttaat 186  Q
    || ||||||||||||||||||||||||||||||    
T  561582 ataataataattctcttttatggtatgcttaat 561550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 31438668 - 31438799
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||    
T  31438668 cggggcactggttaaggatatgaaaaaggaaattatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctttt 31438767  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||||||||    
T  31438768 atgataataattcccttttatggtatgcttaa 31438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 35851895 - 35851784
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  35851895 tgaaaaaggaaattatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcattttatggtaataattctctttta 35851796  T
Q  174 tggtatgcttaa 185  Q
    ||||||||||||    
T  35851795 tggtatgcttaa 35851784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 22887753 - 22887903
Alignment:
Q  36 aaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaag 134  Q
    ||||| ||||| ||||||| |||||| || ||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22887753 aaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaag 22887852  T
Q  135 tcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    | ||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  22887853 ttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaa 22887903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 2898110 - 2898233
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||    
T  2898110 atatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataataattctctt 2898209  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    |||||||||| ||||| |||||||    
T  2898210 ttatggtatgtttaatcagtgtcc 2898233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 25782983 - 25782857
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  25782983 ttaagaatatgaaaaaggaaattatata---gttaatgcattgaaattgtgtaattattttataataaagtcaaaaacaattttcttttatgataataat 25782887  T
Q  165 tctcttttatggtatgcttaattagtgtcc 194  Q
    || ||||||||||||||||||  |||||||    
T  25782886 tcccttttatggtatgcttaaccagtgtcc 25782857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 27856560 - 27856429
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  27856560 cggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 27856461  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||  ||||||||||||||||||    
T  27856460 atggtaataatttccttttatggtatgcttaa 27856429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 31390034 - 31390165
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||  ||||  |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||    
T  31390034 cggggcactagttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttcctttt 31390133  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  31390134 atggtaataattcccttttatggtatgcttaa 31390165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 1859201 - 1859315
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  1859201 atataaaaaaagaaattgtatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctctt 1859300  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  1859301 ttatggtatgcttaa 1859315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 6580212 - 6580342
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||   |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||||    
T  6580212 ggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttcctttta 6580311  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  6580312 tggtaataattcccttttatggtatgcttaa 6580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 20552954 - 20553084
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||||||| |||  |||||    
T  20552954 ggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 20553053  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  20553054 tggtaataattcccttttatggtatgcttaa 20553084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 22567641 - 22567755
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||  ||||||| |||||||||||||    
T  22567641 atatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttccttttatggtaataattctctt 22567740  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  22567741 ttatggtatgcttaa 22567755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 34442679 - 34442565
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||| |||    
T  34442679 atatgaaaaagaagattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattccctt 34442580  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  34442579 ttatggtatgcttaa 34442565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 38591037 - 38590907
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| |||| ||||||||||||||||||||| | ||||||||| ||| ||||| ||||||||||| |||||||||||||||||| |||| |||||    
T  38591037 ggggcactggttaagaatatgaaaaaggaaattatacagtagttaatgtattaaaattgtgtaattaattgataataaagtcaaaaacagttttctttta 38590938  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  38590937 tggtaataattcccttttatggtatgcttaa 38590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 11021404 - 11021259
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    ||||||||||   |||||||| |||||| ||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||| |||||||||||    
T  11021404 aaatgttaactggtgcctcggagcactgattaaagatatgaaaaaagaaattatatggtagttaatgcattgaaattgtgtaattaatatataataaagt 11021305  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgc 181  Q
    |||||||| |||| |||| || ||||||||| ||||||||||||||    
T  11021304 caaaaacagttttcttttgtggtaataattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 30486232 - 30486363
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||| |||  ||||    
T  30486232 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaaactataataaagtcaaaaacagtttcctttt 30486331  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  30486332 atggtaataattcccttttatggtatgcttaa 30486363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 32361033 - 32360902
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  || |||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||  ||||    
T  32361033 cggggcactggttaaggatgtgaaaaagaaaattatataatagttaatgcattgaaataatataattaattgataataaagtcaaaaacagtttcctttt 32360934  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  32360933 atggtaataattcccttttatggtatgcttaa 32360902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 32860141 - 32860263
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  32860141 atataaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatg-taataattctctt 32860239  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    |||||||||||||||  |||||||    
T  32860240 ttatggtatgcttaaccagtgtcc 32860263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 4381835 - 4381948
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| |||||||||  |||    
T  4381835 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccattt 4381934  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  4381935 tatggtatgcttaa 4381948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 5093686 - 5093566
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||  |||    
T  5093686 atatgaaaaaggaaattaaatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataatttcctt 5093587  T
Q  171 ttatggtatgcttaattagtg 191  Q
    |||||||||| |||| |||||    
T  5093586 ttatggtatgtttaactagtg 5093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 44587924 - 44588055
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||  |||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||| |||  ||||    
T  44587924 cggggcaccggttaaggatataaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataataaagtaaaaaacagtttcctttt 44588023  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  44588024 atggtaataattcccttttatggtatgcttaa 44588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 22068483 - 22068353
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||| ||||||||| |||||| |||||||||||| | ||||||||| |||||||||||||||||| |||  ||||    
T  22068483 cggggcactggttaaggatatgaaaaagggaattatatagtagtta-tgcattgaaattgtataattaattgataataaagtcaaaaacagtttcctttt 22068385  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  22068384 atggtaataattcccttttatggtatgcttaa 22068353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 5881256 - 5881375
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgc----attgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattc 166  Q
    |||||||||||||||||||||| ||||||||||    ||||||||| ||||||||||| |||||||||||||||| | |||  ||||||||||||||||     
T  5881256 atatgaaaaaggaaattatatagtagttaatgcatgcattgaaattgtgtaattaattgataataaagtcaaaaagagtttccttttatgataataatta 5881355  T
Q  167 tcttttatggtatgcttaat 186  Q
    ||||||||||||||||||||    
T  5881356 tcttttatggtatgcttaat 5881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 13574176 - 13574062
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||||||| ||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||  |||    
T  13574176 atatgaaaaaggaaaatatataaaaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataatttcctt 13574077  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  13574076 ttatggtatgcttaa 13574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 25772143 - 25772265
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataa-tagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataa 163  Q
    |||| ||||||||||||||||||||| || || |||||||| ||||||| |||||||||||||||||||||||||||| |||||   |||||||||||||    
T  25772143 ttaagaatatgaaaaaggaaattataaaaataattaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataataa 25772242  T
Q  164 ttctcttttatggtatgcttaat 186  Q
    ||| |||||||||||| ||||||    
T  25772243 ttcccttttatggtatacttaat 25772265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 28600966 - 28601119
Alignment:
Q  31 atggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataat 130  Q
    |||||||||| |||||  ||||  ||||||||| ||||  |||||||||||| ||||||| | |||||| |||||||||||| | ||||||||| |||||    
T  28600966 atggaaaatgctaaccagtgcccgggggcactggttaaggatatgaaaaagggaattataaagtagtta-tgcattgaaattgtataattaattgataat 28601064  T
Q  131 aaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||| ||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  28601065 aaagttaaaaacagtttctttttatggtaataattctcttttatggtatgcttaa 28601119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 43637203 - 43637297
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  43637203 atatgaataaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataatt 43637297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 38296200 - 38296317
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||| ||||||||||| |||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||| |||  |||||    
T  38296200 ggggcactggttaaagatatgaaaaagaaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttcttttta 38296299  T
Q  155 tgataataattctctttt 172  Q
    || |||||||| ||||||    
T  38296300 tggtaataattttctttt 38296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 8969554 - 8969434
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| || |||  ||||||| ||||||||  |||    
T  8969554 atatgaaaaagaaaattatatagtagttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataatttcctt 8969455  T
Q  171 ttatggtatgcttaattagtg 191  Q
    |||| |||||||||| |||||    
T  8969454 ttatagtatgcttaactagtg 8969434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 3668301 - 3668146
Alignment:
Q  30 tatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataa 129  Q
    ||||||||||| |||||  |||| | || ||||| ||||   |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  3668301 tatggaaaatgctaaccggtgcccccggacactggttaagggtatggaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa 3668202  T
Q  130 taaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||| |||  ||||||| ||||||||  ||||||| ||||| ||||    
T  3668201 taatgtcaaaaacagtttccttttatggtaataatttccttttatagtatgtttaa 3668146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 194
Target Start/End: Complemental strand, 4022636 - 4022503
Alignment:
Q  60 actgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgata 159  Q
    |||| |||| ||||||||||| ||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||  ||||||||||    
T  4022636 actgattaagaatatgaaaaaagaaatta-atagtagttaatgtattgaaattctgtaattaatttataataaagtcagaaacagtttccttttatgata 4022538  T
Q  160 ataattctcttttatggtatgcttaattagtgtcc 194  Q
    ||||||  |||||||| |||| ||||  |||||||    
T  4022537 ataatttccttttatgatatgtttaaccagtgtcc 4022503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 27584777 - 27584891
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||| || |||  ||||||| ||||||||||| |    
T  27584777 atatgaaaagggaaattatatagtagttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttatggtaataattctcat 27584876  T
Q  171 ttatggtatgcttaa 185  Q
    | ||||||| |||||    
T  27584877 tcatggtatacttaa 27584891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 15079100 - 15079012
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  15079100 aaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataa-aaagtcaaaaacaatttccttttatgataataatt 15079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 26891827 - 26891740
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaa 141  Q
    |||| ||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26891827 cgggacactgattaaggatataaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaa 26891740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 29102436 - 29102316
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    |||| ||||| |||||| ||||||||||   |||||| |||||||||| | |||||||||||||||||||||||||||| |||| ||||||  |||||||    
T  29102436 ttaagaatatcaaaaagaaaattatatagcggttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaataat 29102337  T
Q  165 tctcttttatggtatgcttaa 185  Q
    | ||||||||| |||| ||||    
T  29102336 tatcttttatgatatgtttaa 29102316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 15146683 - 15146784
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgct 182  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||| |||||  |||||||||||||||| || ||| ||||||| |    
T  15146683 aaattatataatagttaatacattgaaattgtataattaatttataa-aaagtcaaaaataatttccttttatgataataattttcctttttggtatgtt 15146781  T
Q  183 taa 185  Q
    |||    
T  15146782 taa 15146784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 39531868 - 39531953
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataata 162  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | |||||||| || |||| ||||||| |||||    
T  39531868 aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaata 39531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 34123166 - 34123058
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||| |||||||||||||||||||||| ||||| || |||||||||||||||| ||||||||||||| |||  ||||||| | |||||| |||||| |     
T  34123166 aaaaaagaaattatataatagttaatgctttgaatttgtgtaattaatttataa-aaagtcaaaaacagtttccttttatggtcataattttctttttta 34123068  T
Q  176 gtatgcttaa 185  Q
     |||||||||    
T  34123067 atatgcttaa 34123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 30834504 - 30834409
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaat-tatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttt 172  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||   ||| ||| | ||||||| |||| |||||||||||||||| ||||||    
T  30834504 aaaaaggaaattatataatagttattgcattgaaaactgtgtaattaatac-taaaaaaataaaaaaca-ttttcttttatgataataattttctttt 30834409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 50544 - 50701
Alignment:
Q  29 atatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttat 127  Q
    |||||| |||||||||||  |||||| ||||||||| ||||| |||||||||||||||||||||| |||||||||  |||||||| | ||||||||||||    
T  50544 atatgggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagttaatgttttgaaattgtataattaatttat 50643  T
Q  128 aataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||    
T  50644 aataaagtcaaaatcaattttcttttatgataataattctcttttatagtatgtttaa 50701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 53493 - 53384
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||           |||||||||||||    
T  53493 atataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatt-----------taataattctctt 53405  T
Q  171 ttatggtatgcttaattagtg 191  Q
    ||||||||||||||| |||||    
T  53404 ttatggtatgcttaactagtg 53384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 30810677 - 30810808
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  30810677 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttctttt 30810776  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||| |||||||||||||| ||||    
T  30810777 atggtaataattttcttttatggtatgtttaa 30810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 29993651 - 29993511
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||    
T  29993651 cggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttcctttt 29993552  T
Q  154 atgataataattctcttttatggtatgcttaattagtgtcc 194  Q
    ||| ||||||||| ||||||||||||||||||  |||||||    
T  29993551 atggtaataattcccttttatggtatgcttaaccagtgtcc 29993511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 43594183 - 43594069
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||  | |||||||||||||||||||    
T  43594183 atataaaaaaggaaattatataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctcttatgataataattctctt 43594084  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  43594083 ttatggtatgcttaa 43594069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 8754745 - 8754613
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||     
T  8754745 gcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttgttttatgg 8754646  T
Q  158 taataattctcttttatggtatgcttaattagt 190  Q
    ||||||||  |||||||||||||||||| ||||    
T  8754645 taataatttccttttatggtatgcttaactagt 8754613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 5729372 - 5729499
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||| |||||| ||||||      
T  5729372 gcactggttaaggatatgaaaaaggaaattatataatagttaatgtattgaaataatgtaattaattgataataaagtcaaaaataattttcttttatag 5729471  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||| ||||||||    
T  5729472 taataattctcttttatggcatgcttaa 5729499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 24798550 - 24798436
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| |||    
T  24798550 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattccctt 24798451  T
Q  171 ttatggtatgcttaa 185  Q
    |||| ||||||||||    
T  24798450 ttatagtatgcttaa 24798436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 28587948 - 28588062
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  28587948 atatgaaaaaggaaattatatagtagtcaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattccctt 28588047  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||| ||||    
T  28588048 ttatggtatgtttaa 28588062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 46716657 - 46716791
Alignment:
Q  51 cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttat 150  Q
    |||||| ||| || ||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||  |    
T  46716657 cctcggagcattggttaaagatataaaaaaggaaattatataatacttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttcct 46716756  T
Q  151 tttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||| ||||||||||||| ||||    
T  46716757 tttatgataataattcccttttatggtatgtttaa 46716791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 5239325 - 5239438
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||    
T  5239325 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttt 5239424  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  5239425 tatggtatgcttaa 5239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 24438517 - 24438630
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||    
T  24438517 tatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttt 24438616  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  24438617 tatggtatgcttaa 24438630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 47839514 - 47839640
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||| |||| ||||  |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||  ||||    
T  47839514 cggggtactggttaaggatatgaaaaaggaatttatataatagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctttt 47839613  T
Q  154 atgataataattctcttttatggtatg 180  Q
    ||| ||||||||| |||||||||||||    
T  47839614 atggtaataattcccttttatggtatg 47839640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 11686471 - 11686355
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaaca--attttattttatgataataattctc 168  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||| ||||||| |||||||||||    
T  11686471 atataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaataattctc 11686372  T
Q  169 ttttatggtatgcttaa 185  Q
    ||||||| |||||||||    
T  11686371 ttttatgatatgcttaa 11686355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 45045810 - 45045923
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||||||||||||| ||||    
T  45045810 tatgaaaaatgaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttt 45045909  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  45045910 tatggtatgcttaa 45045923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 12218600 - 12218469
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||||||||  |||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | ||||| | |||  ||||    
T  12218600 cggggcactggataagtatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaaataaaaaatagtttcctttt 12218501  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||| ||||    
T  12218500 atggtaataattctcttttatggtatgtttaa 12218469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 34606283 - 34606414
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| || |||||||||||||||||||||||| || |||  ||||    
T  34606283 cggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaagcagtttcctttt 34606382  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||  ||||||||||||||||||    
T  34606383 atggtaataattaccttttatggtatgcttaa 34606414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 4628605 - 4628719
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||| ||||| |||  ||||||| ||||||||| |||    
T  4628605 atatgaaaaaggaaattatatagtagttaatacattgaaattgtttaattaatttataataaagtcagaaacagtttacttttatggtaataattccctt 4628704  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  4628705 ttatggtatgcttaa 4628719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 7689347 - 7689233
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| |||||||||||| || | || |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  7689347 atataaaaaaggaaattttacagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctctt 7689248  T
Q  171 ttatggtatgcttaa 185  Q
    ||||||||| |||||    
T  7689247 ttatggtatacttaa 7689233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 47657003 - 47657137
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  ||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||| |||| || |||  |||||    
T  47657003 ggggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattgaaattgtgtaattaatttataataaagttaaaagcagttt--tttta 47657100  T
Q  155 tgataataattctcttttatggtatgcttaattagtg 191  Q
    || ||||||||| ||||||||||||||||||| ||||    
T  47657101 tggtaataattcccttttatggtatgcttaatcagtg 47657137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 23363352 - 23363200
Alignment:
Q  33 ggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataa 132  Q
    ||||||||||||||  || | ||| |||||  ||||  ||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  23363352 ggaaaatgttaaccggtgtcccggagcactcgttaaggataagaaaaaggaaattgtatagtagttaatgcattgaaattgtgtaattaatttataataa 23363253  T
Q  133 agtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||| |||  ||||||| ||||| ||||||||||||||||| ||||    
T  23363252 agttaaaaacagtttccttttatggtaatatttctcttttatggtatgtttaa 23363200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 33636485 - 33636605
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||| | |||  ||||||| |||||||    
T  33636485 ttaagaatatgaaaaagaaaattatataataattaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataat 33636584  T
Q  165 tctcttttatggtatgcttaa 185  Q
    ||| |||||||||||||||||    
T  33636585 tctattttatggtatgcttaa 33636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 13065024 - 13064909
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtca-aaaacaattttattttatgataataattctct 169  Q
    ||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||||||||||| |||||| |||  ||||||| ||||||||| ||    
T  13065024 atatgaaaaaggaaattatataatatttaatgtattgaatttgtgtaattaatttataataaagtcaaaaaacagtttccttttatggtaataattccct 13064925  T
Q  170 tttatggtatgcttaa 185  Q
    ||||||||||||||||    
T  13064924 tttatggtatgcttaa 13064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 1737003 - 1737132
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| |||   ||||    
T  1737003 ggggcactggttaaggatatgaaaaatgaaattatataatagttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccattta 1737102  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||  |||||||||||||||||    
T  1737103 tgataataattc-attttatggtatgcttaa 1737132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 18117182 - 18117296
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||||  ||||||||   ||    
T  18117182 atatgaaagaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataatttcatt 18117281  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  18117282 ttatggtatgcttaa 18117296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 195
Target Start/End: Complemental strand, 37674240 - 37674127
Alignment:
Q  82 gaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgc 181  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||  | || | |||||||||||||    
T  37674240 gaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgc 37674141  T
Q  182 ttaattagtgtccg 195  Q
    ||||  ||||||||    
T  37674140 ttaaccagtgtccg 37674127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 42044439 - 42044326
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||||| ||||||||  ||||||||| ||||||||||||||||||| |||||||||| |||| ||||||| ||||||||| ||||    
T  42044439 tatgaaaaaagaaattatatagtagttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattcccttt 42044340  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||| ||||    
T  42044339 tatggtatgtttaa 42044326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 525234 - 525108
Alignment:
Q  59 cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgat 158  Q
    ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||||||| | |||||||||||||||||| ||||||||| |||  ||||||| |    
T  525234 cactggttaaagatatgaaaaagaaaagtatacagtagttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggt 525135  T
Q  159 aataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||| |||| ||||    
T  525134 aataattctcttttatgatatgtttaa 525108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 18485983 - 18486114
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  ||||  |||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||| ||||||| |||  ||||    
T  18485983 cggggcactggttaaggatattgaaaaggaaattatatagtaattaatgtattgaaattgtgtaattaatttataataaagttaaaaacagtttcctttt 18486082  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||   |||||||||||||||||    
T  18486083 atggtaataatttcattttatggtatgcttaa 18486114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 34333306 - 34333436
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||| |||||| |||  ||||    
T  34333306 cggggcactggttaagggtatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaatttataataatgtc-aaaacagtttcctttt 34333404  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||  |||||||||||| ||||    
T  34333405 atggtaataattcctttttatggtatgtttaa 34333436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 47083094 - 47083208
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||| |||  ||||||| ||||||||| |||    
T  47083094 atatgaaaaaagaaattatatagtagttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggtaataattccctt 47083193  T
Q  171 ttatggtatgcttaa 185  Q
    ||||| |||| ||||    
T  47083194 ttatgatatgtttaa 47083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 29835857 - 29835736
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaaca-attttattttatgataataa 163  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||| |||||  ||||||||||| ||||||||| |||||||  |||| ||||||| ||||||    
T  29835857 ttaaagatatgaaaaaggaagttatatactagttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaataa 29835758  T
Q  164 ttctcttttatggtatgcttaa 185  Q
    |||| |||||||||||||||||    
T  29835757 ttctattttatggtatgcttaa 29835736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 34546461 - 34546376
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||  |||||||    
T  34546461 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttatagtaaagtcaaaaacagtttacttttatg 34546376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 37631706 - 37631601
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||  |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| |||  ||||    
T  37631706 cggggcacgggttaaggatataaaaaaggaaattatataataattaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttcctttt 37631607  T
Q  154 atgata 159  Q
    ||||||    
T  37631606 atgata 37631601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 4100671 - 4100562
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| || |||||| ||| ||||||||| ||||||||||||| || ||||||||| ||||| ||||||||||||||||  ||    
T  4100671 atatgaaaaaggaaattatatagtaattaatgtattaaaattatgttattaatttataatcaaatcaaaaacagtttta-tttatgataataattcattt 4100573  T
Q  171 ttatggtatgc 181  Q
    |||| ||||||    
T  4100572 ttatagtatgc 4100562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 28262070 - 28262179
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||     |||||||||||||||||||| |||||||| ||||||||| |||  ||||||  |||||||||| ||    
T  28262070 atatgaaaaaggaaattatatagtagtta-----ttgaaattatgtaattaattgataataaaatcaaaaacagtttccttttatagtaataattctttt 28262164  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  28262165 ttatggtatgcttaa 28262179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 27456275 - 27456174
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||  ||||||    
T  27456275 gggcactggttaaggatatggaaaaagaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttat 27456176  T
Q  156 ga 157  Q
    ||    
T  27456175 ga 27456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 22739868 - 22739976
Alignment:
Q  77 aaaaggaaattatataatagttaatgcattgaaattatgtaattaatttat-aataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||| || ||| | ||||||| |||| ||||||| |||||||| | |||| |     
T  22739868 aaaaggaaagtatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataattttattttttt 22739967  T
Q  176 gtatgctta 184  Q
    |||||||||    
T  22739968 gtatgctta 22739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 18470081 - 18469993
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    |||||||||||||||||  ||||||| |||||||||| |||||||||||||| | ||||||||||||| ||  |||||||| ||||||||    
T  18470081 aaaaaggaaattatatagcagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttatggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 23357854 - 23357743
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| ||||| |||| |||||||||||||  | |    |||||||||||||| ||||||||||||| |||   ||||||||||||||||||||    
T  23357854 atatgaaaaagaaaattgtatagtagttaatgcatttcagta---taattaatttataaaaaagtcaaaaacagtttccatttatgataataattctctt 23357758  T
Q  171 ttatggtatgcttaa 185  Q
     |||| |||||||||    
T  23357757 ctatgatatgcttaa 23357743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 36437421 - 36437507
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataa 163  Q
    ||||||| ||||||||| ||| |||| |||||||||| | |||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  36437421 aaaaaggtaattatatagtaggtaattcattgaaattgtttaattaatttataa-aaagtcaaaaatagttttcttttatgataataa 36437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 3021930 - 3022000
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaac 142  Q
    |||| ||||||||||||||||| |||||||| |||||||||| | |||||||||||||| ||||||| ||||    
T  3021930 atattaaaaaggaaattatatactagttaatacattgaaattgtataattaatttataa-aaagtcataaac 3022000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 18220812 - 18220703
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||||||||||||||| || |||||| || |||||| |||||||||||||||| || | |||||| | |||| ||||||| |||||| |  ||||| ||    
T  18220812 aaaaaggaaattatatagtaattaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttg 18220714  T
Q  176 gtatgcttaat 186  Q
    |||| ||||||    
T  18220713 gtatccttaat 18220703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 4087667 - 4087720
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataa 129  Q
    ||||||||||||||||| ||||||||||||||||||  ||| ||||||||||||    
T  4087667 aaaaaggaaattatatagtagttaatgcattgaaatagtgtgattaatttataa 4087720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 13556474 - 13556553
Alignment:
Q  94 tagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttat 174  Q
    |||| |||||||||||||| |||||||||||||||| |||||||| |||||| |  ||||||| ||||||||  |||||||    
T  13556474 tagtcaatgcattgaaattgtgtaattaatttataa-aaagtcaataacaatatctttttatggtaataatttccttttat 13556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 20116940 - 20117022
Alignment:
Q  82 gaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    ||||||||||| || |||||||||||||||| |||| | ||||| ||| || | |||||||| |||| ||||||||||||||||    
T  20116940 gaaattatatagtaattaatgcattgaaattgtgtagtaaatttttaa-aaggccaaaaacagttttcttttatgataataatt 20117022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 47118100 - 47118037
Alignment:
Q  107 gaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||| ||||||||||||||||||||||||| | || |||  ||||||| |||||||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataattctctt 47118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 18220580 - 18220510
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattt 147  Q
    |||||| |||||||||| || |||||| ||| ||||| |||||||||||||||| |  ||||||||||||||    
T  18220580 aaaaagaaaattatatagtaattaatgtattaaaattgtgtaattaatttataa-attgtcaaaaacaattt 18220510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 18220673 - 18220624
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaattt 125  Q
    ||||||||||||||||| || ||| || ||||||||| ||||||||||||    
T  18220673 aaaaaggaaattatatagtaattactgtattgaaattgtgtaattaattt 18220624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 1391342 - 1391211
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||| |||| ||||  |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||    
T  1391342 cggggtactgattaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttctttt 1391243  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||||||||    
T  1391242 atgataataattcccttttatggtatgcttaa 1391211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 23629769 - 23629609
Alignment:
Q  25 tatgatatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatt 124  Q
    |||| ||||| ||||||||||| ||||| |||||||||| ||||  ||||||||||| |||||||||| ||||||||| ||||||||| |||||||| ||    
T  23629769 tatgttatgggaaatgttaaccgatgccccggggcactgattaaggatatgaaaaagaaaattatatagtagttaatgtattgaaattgtgtaattactt 23629670  T
Q  125 tataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||||||||||  |||||||| ||||||| ||||||||| ||| |||||    
T  23629669 tataataaagtcaaaaacaatttccttttatgacaataattttcttttatgttatacttaa 23629609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 392118 - 392249
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  392118 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 392217  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  392218 atggtaataattctcttttatggtatgcttaa 392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 4215717 - 4215848
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  4215717 cggggcactggttaagagtatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 4215816  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||  ||||||||||||||||||    
T  4215817 atggtaataatttccttttatggtatgcttaa 4215848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 2580991 - 2581105
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||| |||    
T  2580991 atataaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaataattccctt 2581090  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  2581091 ttatggtatgcttaa 2581105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 32985360 - 32985226
Alignment:
Q  51 cctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttat 150  Q
    |||||||||| || ||||  |||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||  |    
T  32985360 cctcggggcattggttaaggatataaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcct 32985261  T
Q  151 tttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||||||| ||||||||||||||||||    
T  32985260 tttatgataataattcccttttatggtatgcttaa 32985226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 29451284 - 29451148
Alignment:
Q  49 tgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaatttt 148  Q
    |||||| |||||| | ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||     
T  29451284 tgcctccgggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaaattataataaagtcaaacacagtttc 29451185  T
Q  149 attttatgataataattctcttttatggtatgcttaa 185  Q
     ||||||||||||||||| ||||||||||||||||||    
T  29451184 cttttatgataataattcccttttatggtatgcttaa 29451148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 961051 - 961162
Alignment:
Q  74 tgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctttta 173  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||    
T  961051 tgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctctttta 961150  T
Q  174 tggtatgcttaa 185  Q
    ||||||||||||    
T  961151 tggtatgcttaa 961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 12145264 - 12145150
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||  |||    
T  12145264 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataatttcctt 12145165  T
Q  171 ttatggtatgcttaa 185  Q
    |||| ||||||||||    
T  12145164 ttatagtatgcttaa 12145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 32929654 - 32929541
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||    
T  32929654 tatgaaaaaggaaattatatattaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttt 32929555  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  32929554 tatggtatgcttaa 32929541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 2350674 - 2350805
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| | |||  ||||    
T  2350674 cggggcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttcctttt 2350773  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| |||||||| |||||||||    
T  2350774 atggtaataattcccttttatgatatgcttaa 2350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 5323426 - 5323549
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| |||| ||||| ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||     
T  5323426 gcactgattaagaatataaaaaaggaaattatatagtaattaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatgg 5323525  T
Q  158 taataattctcttttatggtatgc 181  Q
    ||||||||| ||||||||||||||    
T  5323526 taataattcccttttatggtatgc 5323549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 23402160 - 23402291
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| || ||||||||||||||||||||||||||| |||  ||||    
T  23402160 cggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaaacagtttcctttt 23402259  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||  ||||||||||||||||||    
T  23402260 atggtaataattaccttttatggtatgcttaa 23402291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 35043912 - 35044042
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||| ||||| ||||  |||||||||| ||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||||| |||| ||||    
T  35043912 cgggacactggttaaggatatgaaaaaagaaattatatagtagttaattcattgaaattgtgta-ttaatttataataaagtcaaaaacagttttctttt 35044010  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||||||||||||||||||||||    
T  35044011 atggtaataattctcttttatggtatgcttaa 35044042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 3026155 - 3026033
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||| ||||||||| | ||||||||||||||||||| | ||||||||||||||||| |||||||||| |||| ||||||  ||||||||||||||    
T  3026155 tatgaaaaatgaaattatacagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacagttttcttttatcgtaataattctcttt 3026056  T
Q  172 tatggtatgcttaattagtgtcc 194  Q
    ||||||||||||||| |||||||    
T  3026055 tatggtatgcttaatcagtgtcc 3026033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 25165560 - 25165446
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| ||||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  25165560 atatgaaaaaagaaattatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattctctt 25165461  T
Q  171 ttatggtatgcttaa 185  Q
    ||| | |||||||||    
T  25165460 ttacgatatgcttaa 25165446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 26467288 - 26467162
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||  ||||    
T  26467288 cggggcaccggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttcctttt 26467189  T
Q  154 atgataataattctcttttatggtatg 180  Q
    ||| ||||||||| |||||||||||||    
T  26467188 atggtaataattcccttttatggtatg 26467162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 3515806 - 3515919
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| ||||    
T  3515806 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttt 3515905  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||| ||||    
T  3515906 tatggtatgtttaa 3515919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 7851321 - 7851192
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  ||||||||||| |||||||||| || |||||||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||    
T  7851321 gggcactggttaaggatatgaaaaagaaaattatatagtaattaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat 7851222  T
Q  156 gataataattctcttttatggtatgcttaa 185  Q
    | ||||||||| ||||||||||||||||||    
T  7851221 ggtaataattcccttttatggtatgcttaa 7851192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 34852002 - 34851882
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||  ||||||  |||||||    
T  34852002 ttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataat 34851903  T
Q  165 tctcttttatggtatgcttaa 185  Q
    ||||||||||  |||||||||    
T  34851902 tctcttttataatatgcttaa 34851882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 18276777 - 18276654
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||  ||||||    
T  18276777 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaatttgtgtaattaatttataataaagtcaaaaacagtttccttttat 18276678  T
Q  156 gataataattctcttttatggtat 179  Q
    | ||||||||  ||||||||||||    
T  18276677 ggtaataatttccttttatggtat 18276654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 13417152 - 13416992
Alignment:
Q  29 atatggaaaatgttaacccatgcc-tcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttat 127  Q
    |||||| ||||||||||| || || || |||||||  ||||  |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  13417152 atatgggaaatgttaaccgataccctcagggcactagttaaggatatgaaaaaggaaattatatattagttaatgtattgaaattgtgtaattaatttat 13417053  T
Q  128 a---ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |   ||||||||||||||| |||| ||||||| |||||||||||||||||  |||||||||    
T  13417052 aataataaagtcaaaaacagttttcttttatggtaataattctcttttataatatgcttaa 13416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 28225260 - 28225373
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||| ||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  28225260 atatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattccctt 28225358  T
Q  171 ttatggtatgcttaa 185  Q
    ||||||||| |||||    
T  28225359 ttatggtatccttaa 28225373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 29978271 - 29978385
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||  |||||||||||||||||||||| ||| |||||||| ||||||||| |||    
T  29978271 atatgaaaaaggaaattatatagtatttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataattccctt 29978370  T
Q  171 ttatggtatgcttaa 185  Q
    ||||| |||||||||    
T  29978371 ttatgatatgcttaa 29978385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 12525759 - 12525878
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||| |||||| ||| ||| |||||||| ||||||||| ||||    
T  12525759 tatgaaaaaggaaattatatagtagttaatacattgaaaatgtgtaattaatttataataatgtcaaacacagtttcattttatggtaataattcccttt 12525858  T
Q  172 tatggtatgcttaattagtg 191  Q
    |||| ||||||||| |||||    
T  12525859 tatgatatgcttaactagtg 12525878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 21878494 - 21878399
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattc 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||    
T  21878494 atatgaaaaaggaaattatatagtagttaatgcattgaaattatttaattaatttataataaagtcaaaaacagtttctttttatggtaataattc 21878399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 27433514 - 27433645
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |||| |||||||| | |||  ||||    
T  27433514 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttcctttt 27433613  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||| ||||    
T  27433614 atggtaataattcccttttatggtatgtttaa 27433645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 11115256 - 11115130
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||| ||||  |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||| | |||| |||||||    
T  11115256 ggcactggttaaggatataaaaaaggaaattatataatagttaatacattgaaattgtgtaattaatttataataa--tcaaaaatagttttcttttatg 11115159  T
Q  157 ataataattctcttttatggtatgcttaa 185  Q
     ||||||||| |||||||| |||| ||||    
T  11115158 gtaataattcccttttatgatatgtttaa 11115130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 34396674 - 34396602
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaaca 143  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34396674 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaaca 34396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 20897972 - 20898072
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||    
T  20897972 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttat 20898071  T
Q  156 g 156  Q
    |    
T  20898072 g 20898072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 34477712 - 34477612
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||    
T  34477712 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttat 34477613  T
Q  156 g 156  Q
    |    
T  34477612 g 34477612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 1840407 - 1840280
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||| ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| ||||||| |||  ||| |||     
T  1840407 gcactggttaaggatataaaaaaagaaattatataataattaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatgg 1840308  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||| |||||||| |||| ||||    
T  1840307 taataattcccttttatgatatgtttaa 1840280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 13529476 - 13529554
Alignment:
Q  53 tcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataata 131  Q
    ||||||||||| ||||  || ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  13529476 tcggggcactggttaaggatgtgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 31280362 - 31280456
Alignment:
Q  73 atgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattct 167  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||  |||  ||||||  ||||||||||    
T  31280362 atgaaaaaggaaattatatagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacggtttccttttatagtaataattct 31280456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 9661025 - 9661120
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattc 166  Q
    |||||||||| ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| |||| || |||  ||||||| |||||||||    
T  9661025 atatgaaaaaagaaattacataatagttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatggtaataattc 9661120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 24227506 - 24227443
Alignment:
Q  100 atgcattgaaattatgtaattaatttataataaagtcaaaaacaa-ttttattttatgataataa 163  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  24227506 atgcattgaatttatgtaattaatttataa-aaagtcaaaaaaaagttttcttttatgataataa 24227443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 22417311 - 22417352
Alignment:
Q  150 ttttatgataataattctcttttatggtatgcttaattagtg 191  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  22417311 ttttatgctaataattctcttttatggtatgcttaatcagtg 22417352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 10431780 - 10431827
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaat 123  Q
    ||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  10431780 aaaaaagaaattatataatagttattacattgaaattgtgtaattaat 10431827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 14559943 - 14559993
Alignment:
Q  53 tcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgc 103  Q
    |||||| |||| ||||| |||||||||| |||| |||||||||||||||||    
T  14559943 tcggggaactgattaaagatatgaaaaaagaaaatatataatagttaatgc 14559993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 5e-44; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 3097698 - 3097812
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||  |||    
T  3097698 atatgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataatttcctt 3097797  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  3097798 ttatggtatgcttaa 3097812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 3784873 - 3784746
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||     
T  3784873 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacaattttcttttatgg 3784774  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||  ||||||||||||||||||    
T  3784773 taataatttccttttatggtatgcttaa 3784746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 6770359 - 6770490
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||  ||||  |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  6770359 cggggcactaattaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcatttt 6770458  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| |||||||| |||||||||    
T  6770459 atgataataattcccttttatgatatgcttaa 6770490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 8473061 - 8472938
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  8473061 atataaaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataataattctctt 8472962  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    ||||||||| |||||  |||||||    
T  8472961 ttatggtatacttaaccagtgtcc 8472938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 38335196 - 38335317
Alignment:
Q  59 cactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgat 158  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  38335196 cactggttaaagatatgaaaaaggaaattatatagtaattaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgat 38335295  T
Q  159 aataattctcttttatggtatg 180  Q
    |||||||| |||||||||||||    
T  38335296 aataattcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 48071486 - 48071635
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    ||||| ||||| ||||  ||||| |||| ||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48071486 aaatgctaaccgatgctccggggtactggttaaggatatgtaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatttataataaagt 48071585  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||| |||  ||||||| |||||||| |||||||| ||||||||||    
T  48071586 caaaaacagtttccttttatggtaataattatcttttatagtatgcttaa 48071635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 38162847 - 38163003
Alignment:
Q  30 tatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| |||||||||||  |||||| ||||||||| ||||   |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  38162847 tatgggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttata 38162946  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||| |||||||||| |||  ||||||| ||||||||| ||||||||||||||||||    
T  38162947 ataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 38163003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 18043184 - 18043315
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||    
T  18043184 cggggcactggttaagggtataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttctttt 18043283  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||| |||||||||||||||||    
T  18043284 atggtaataattctattttatggtatgcttaa 18043315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 47010019 - 47010146
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||  |||||||     
T  47010019 gcactggttaaggatatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttttatgg 47010118  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||||||||||||    
T  47010119 taataattctcttttatggtatgcttaa 47010146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 15227762 - 15227892
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||||||| |||  |||||    
T  15227762 ggggcactggttaaggatatgaaaaaggaaattatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcctttta 15227861  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||||| ||||||||||||||||||    
T  15227862 tggtaataattcccttttatggtatgcttaa 15227892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 30294528 - 30294414
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||| |||    
T  30294528 atatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattccctt 30294429  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  30294428 ttatggtatgcttaa 30294414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 43286761 - 43286875
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | |||  ||||||  |||||||||||||    
T  43286761 atatgaaaaaggaaattatataatagttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagtttccttttatagtaataattctctt 43286860  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  43286861 ttatggtatgcttaa 43286875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 5694318 - 5694474
Alignment:
Q  30 tatggaaaatgttaacccatgcctc-ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||| ||||| |||||  |||||| ||||||||| ||||  |||| |||| |||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  5694318 tatgggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagttaatgcattgaaattgtgtaattaattgata 5694417  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||| |||  ||||||| ||||||||| ||||||||||||||||||    
T  5694418 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 5694474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 12072226 - 12072095
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||  ||||||||||||||||||| || ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||    
T  12072226 cggggcaccggttaaggatatgaaaaaggaaattatgtagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagttttctttt 12072127  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||  |||||||||||||||||    
T  12072126 atggtaataattcctttttatggtatgcttaa 12072095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 17333469 - 17333322
Alignment:
Q  31 atggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataat 130  Q
    |||| ||||| |||||  |||| | |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  17333469 atgggaaatgctaaccggtgcccccgggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattcataat 17333370  T
Q  131 aaagtcaaaaacaattttattttatgataataattctcttttatggta 178  Q
    ||||||||||||| |||  ||||||||||||| ||| |||||||||||    
T  17333369 aaagtcaaaaacagtttccttttatgataatacttcccttttatggta 17333322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 24178627 - 24178496
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |||  ||||    
T  24178627 cggggcactggttaaggatatgaaaaaggaaattatataatagttaatgcattgaaattgtgtaattaatctataataaagtcaaaagcagtttcctttt 24178528  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||   |||||||||||||||||    
T  24178527 atggtaataatttcattttatggtatgcttaa 24178496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 42770154 - 42770023
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||| |||  ||||    
T  42770154 cggggcactggttaatggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttcctttt 42770055  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||| |||||||||||||||||    
T  42770054 atggtaataattctattttatggtatgcttaa 42770023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 50128319 - 50128196
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||| || ||| |||||||| |||||||||||||    
T  50128319 atatgaaaaagaaaattacatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataattctctt 50128220  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    |||||||||||||||  |||||||    
T  50128219 ttatggtatgcttaaccagtgtcc 50128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 51065912 - 51065781
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||| ||||| ||||  ||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||  ||||    
T  51065912 cgggacactggttaaggatatgaaaaagtaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcctttt 51065813  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  51065812 atggtaataattcccttttatggtatgcttaa 51065781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 9266889 - 9266761
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||| ||||  |||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||||||| |||  |||||||    
T  9266889 ggcactggttaaggatatgaaaaaggaaattatatagtatttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatg 9266790  T
Q  157 ataataattctcttttatggtatgcttaa 185  Q
     ||||||||| |||||||||||| |||||    
T  9266789 gtaataattcgcttttatggtatacttaa 9266761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 29683217 - 29683349
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaa-aggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattt 152  Q
    |||||||||| ||||| |||| |||| ||||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||| ||| ||||    
T  29683217 cggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattgaaatcgtataattaatttataataaagtcaaaaacagtttcattt 29683316  T
Q  153 tatgataataattctcttttatggtatgcttaa 185  Q
    |||  ||||||||| ||||||||||||||||||    
T  29683317 tatagtaataattcacttttatggtatgcttaa 29683349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 30657630 - 30657755
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||  ||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      | |||    
T  30657630 cggggcactagttaagcatatgaaaaaagaaattatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaac------agttt 30657723  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||||||||    
T  30657724 atgataataattcccttttatggtatgcttaa 30657755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 36446485 - 36446358
Alignment:
Q  57 ggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    ||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||     
T  36446485 ggcactggttaagaatat-aaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttata 36446387  T
Q  157 ataataattctcttttatggtatgcttaa 185  Q
     ||||||||| ||||||||||||| ||||    
T  36446386 gtaataattcccttttatggtatgtttaa 36446358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 29657793 - 29657924
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||| |||  ||||    
T  29657793 cggggcactggttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtataattaattgataataaagtcaaaaacagtttcctttt 29657892  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
     || ||||||||| ||||||||||||||||||    
T  29657893 ttggtaataattcccttttatggtatgcttaa 29657924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 41730328 - 41730461
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagt---taatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatt 151  Q
    ||||||| | |||| ||||||||||| ||||||||||| ||||   ||||||||||||||| | |||||||||||||||||||||||||||| |||  ||    
T  41730328 ggggcacgggttaagaatatgaaaaaagaaattatatagtagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagtttcctt 41730427  T
Q  152 ttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||| ||||||||||||||||||    
T  41730428 ttatgataataattcccttttatggtatgcttaa 41730461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 13961262 - 13961364
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgct 182  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  13961262 aaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttcattttatggtaataattttcttttatggtatgct 13961361  T
Q  183 taa 185  Q
    |||    
T  13961362 taa 13961364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 38702097 - 38701970
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  38702097 cggggcactggttaagggtatgaaaaaggaaactatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagttttctttt 38701998  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||    |||||||||||||||    
T  38701997 atggtaataattc----ttatggtatgcttaa 38701970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 45431317 - 45431431
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| | |||  ||||||| |||||||||||||    
T  45431317 atatgaaaaaggaaattatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattctctt 45431416  T
Q  171 ttatggtatgcttaa 185  Q
    ||||| ||| |||||    
T  45431417 ttatgatatacttaa 45431431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 48383275 - 48383144
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  || |||||||| ||||||||| | |||||||| |||||||| |||||||||||| |||||||||||||||||| |||  ||||    
T  48383275 cggggcactggttaaggatgtgaaaaagaaaattatatgaaagttaatgtattgaaataatgtaattaattgataataaagtcaaaaacagtttcctttt 48383176  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  48383175 atggtaataattcccttttatggtatgcttaa 48383144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 52749624 - 52749755
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||| | || | |||||| |||||||| |||||||||||| ||||    
T  52749624 cggggcattggttaaagatatgaaaaaggaaattatataatagttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaattttttttt 52749723  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| |||||||||  |||||||||||| ||||    
T  52749724 atggtaataattcctttttatggtatgtttaa 52749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 19031962 - 19031848
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||  |||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||  |||    
T  19031962 atatgaaaaaggaaattatatagtagttaaaacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttcctt 19031863  T
Q  171 ttatggtatgcttaa 185  Q
    ||||| |||||||||    
T  19031862 ttatgatatgcttaa 19031848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 47532817 - 47532704
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||||| |||||  |||||| |||||||||| |||    
T  47532817 atatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaa-tgataataaagtcaaaaataatttccttttataataataattccctt 47532719  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  47532718 ttatggtatgcttaa 47532704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 185
Target Start/End: Complemental strand, 35985803 - 35985654
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    |||||||||||  |||| |||  ||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35985803 aaatgttaaccggtgccccggatcactgtttaaggatataaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagt 35985704  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
     ||||||| |||  ||||||| ||||||||| | ||||| |||| |||||    
T  35985703 gaaaaacagtttccttttatggtaataattcccatttatagtatacttaa 35985654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 12306961 - 12307070
Alignment:
Q  75 gaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttat 174  Q
    ||||||| |||||||||  |||||||| |||||||||| ||||||||||||||||||||||||||||||  ||  ||||||| |||||||||||||||||    
T  12306961 gaaaaagaaaattatatg-tagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttat 12307059  T
Q  175 ggtatgcttaa 185  Q
    |||||||||||    
T  12307060 ggtatgcttaa 12307070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 14350423 - 14350311
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||  ||||||| ||||||||| | ||    
T  14350423 tatgaaaaaggaaattatattgtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacaatttccttttatggtaataattc-cctt 14350325  T
Q  172 tatggtatgcttaa 185  Q
     |||||||||||||    
T  14350324 aatggtatgcttaa 14350311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 37315409 - 37315301
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||| ||||||||   |||| ||    
T  37315409 aaaaaggaaattatatagtagttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttg 37315311  T
Q  176 gtatgcttaa 185  Q
    ||||||||||    
T  37315310 gtatgcttaa 37315301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 51368931 - 51368818
Alignment:
Q  72 tatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttt 171  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||| | |||  ||||||  |||||||||  |||    
T  51368931 tatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtagttaatttataataatgtcaaaaatagtttccttttatagtaataattccattt 51368832  T
Q  172 tatggtatgcttaa 185  Q
    ||||||||||||||    
T  51368831 tatggtatgcttaa 51368818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 45449433 - 45449277
Alignment:
Q  29 atatggaaaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttata 128  Q
    |||||||||||| ||||  ||||| ||||| | || ||||| |||| |||||| |||||||||| ||||||||||||| ||||  ||||||||| |||||    
T  45449433 atatggaaaatgctaactgatgccccggggtattggttaaagatataaaaaagaaaattatatagtagttaatgcattaaaatagtgtaattaaattata 45449334  T
Q  129 ataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    |||||||||||| || |||  ||||||| ||||||||  ||||||||||||| ||||    
T  45449333 ataaagtcaaaagcagtttccttttatggtaataattgccttttatggtatgtttaa 45449277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 29210435 - 29210537
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||    
T  29210435 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttcctttt 29210534  T
Q  154 atg 156  Q
    |||    
T  29210535 atg 29210537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 39497346 - 39497430
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  39497346 atatgaaaaagaaaattatatagtagttaatgcattaaaattatataattaatttataataaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 15282661 - 15282551
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||| |    || |||||||||||||||| ||     
T  15282661 atatgaaaaagaaaattatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaaaa----taatttatgataataattcccta 15282566  T
Q  171 ttatggtatgcttaa 185  Q
    |||| ||||||||||    
T  15282565 ttattgtatgcttaa 15282551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 30217806 - 30217915
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||||| ||||| | | ||||||||||||| ||||||| |||||||||||||||||||||||||| | |||| ||||||| ||||||||   |||||||    
T  30217806 aaaaagggaattagagagtagttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttcttttatggtaataatttctttttatg 30217905  T
Q  176 gtatgcttaa 185  Q
    ||||||||||    
T  30217906 gtatgcttaa 30217915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 3838919 - 3838831
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||||| ||||||| |||||||  |||||||    
T  3838919 aaaaaggaaattatataatagttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaataatt 3838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 26228237 - 26228300
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaa 139  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  26228237 aaaaatgaaattatatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaa 26228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 52431632 - 52431734
Alignment:
Q  83 aaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataa-ttctcttttatggtatgc 181  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||| ||||||| ||||||| |||||| |||  |||| ||||||||    
T  52431632 aaattatatagtagttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgc 52431730  T
Q  182 ttaa 185  Q
    ||||    
T  52431731 ttaa 52431734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 35700792 - 35700707
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataa 163  Q
    ||||||||||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||| || ||| ||||||||||||||    
T  35700792 aaaaaggaaattatacagtagttaatacattgaaattgtgtaattaatttataa-aaagtcaaaaaaaaattt-ttttatgataataa 35700707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 37503260 - 37503361
Alignment:
Q  78 aaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggt 177  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||||| ||| ||||||| | |||  ||||||| ||| |||| |||||| ||||    
T  37503260 aaaggaaattatatagtagttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaattgtcttttttggt 37503358  T
Q  178 atg 180  Q
    |||    
T  37503359 atg 37503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 39912445 - 39912363
Alignment:
Q  52 ctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaag 134  Q
    |||||||||||| ||||  |||| |||| |||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||    
T  39912445 ctcggggcactgattaaggatataaaaagggaaattatatactagttaatgcattgaaattgtgtgattaatttataaaaaag 39912363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 23473611 - 23473517
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    ||||||||||||| ||||||||  |||||||| ||||||||| | ||||||||||||||||||||  ||| || |||  ||||||| ||||||||    
T  23473611 atatgaaaaaggagattatatagcagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaataatt 23473517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 39081845 - 39081954
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatg 175  Q
    ||||| ||||||||||| ||||||||| ||||||||| | |||||||||||||| ||  | |||| || ||| ||||||||||||||||| |||||| |     
T  39081845 aaaaatgaaattatatactagttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttatgataataattttctttttta 39081943  T
Q  176 gtatgcttaat 186  Q
     ||||||||||    
T  39081944 atatgcttaat 39081954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 16590356 - 16590269
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataatt 165  Q
    |||||| ||||||||||| | |||||| ||| ||||| |||||||||||||||| || |||| |||||||||| ||||||||||||||||    
T  16590356 aaaaagaaaattatataacaattaatgtatt-aaattgtgtaattaatttataa-aatgtcagaaacaattttcttttatgataataatt 16590269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10976049 - 10976004
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgt 116  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||    
T  10976049 atatgaaaaaggagattatatagtagttaatgcattaaaattatgt 10976004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 19011160 - 19011108
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcatt 106  Q
    |||||||| | ||||  |||||||||||||||||||||| |||||||||||||    
T  19011160 cggggcacgggttaaggatatgaaaaaggaaattatatagtagttaatgcatt 19011108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 19010778 - 19010720
Alignment:
Q  127 taataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||| | |||  ||||||| ||||||||| ||||||||||||| ||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaa 19010720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 19011091 - 19011057
Alignment:
Q  94 tagttaatgcattgaaattatgtaattaatttata 128  Q
    ||||||||||||||||||| |||||||||||||||    
T  19011091 tagttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 28481883 - 28481957
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttat 150  Q
    |||||||||||||||||||| | ||    ||||||| ||||| |||||||||||||||||||| | ||||||| ||||||    
T  28481883 atatgaaaaaggaaattatacagta----atgcattaaaattgtgtaattaatttataataaaat-aaaaacagttttat 28481957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 14881081 - 14881036
Alignment:
Q  116 taattaatttataataaagtcaaaaacaattttattttatgataat 161  Q
    |||||||||||||||||||||||||||| |||  ||||||| ||||    
T  14881081 taattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 65 - 194
Target Start/End: Original strand, 40952 - 41081
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||    
T  40952 ttaagaatatgaaaaatgaaattatataatagttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatgataataat 41051  T
Q  165 tctcttttatggtatgcttaattagtgtcc 194  Q
    |  |||||||| |||||||||  |||||||    
T  41052 ttccttttatgatatgcttaaccagtgtcc 41081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 711 - 831
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataat 164  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||  |||| ||||||| | |||||    
T  711 ttaaagatatgaaaaaggaaattatatagtagttaatccattgaaattgtgtaattaatttataataaagtcaaaaactgttttcttttatggtgataat 810  T
Q  165 tctcttttatggtatgcttaa 185  Q
    |||||||||||||||||||||    
T  811 tctcttttatggtatgcttaa 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 116226 - 116357
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||    
T  116226 cggggcacaggttaaagatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttcctttt 116325  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||| ||||||||||||| ||||    
T  116326 atgataataattcccttttatggtatgtttaa 116357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 864 - 978
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||  |||||||||||||    
T  864 atatgaaaaagaaaattatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataattctctt 963  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  964 ttatggtatgcttaa 978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 95742 - 95618
Alignment:
Q  60 actgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgata 159  Q
    |||| |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||||| ||    
T  95742 actggttaagaatatgaaaaaggaaattatataataattaatgaattgaaattatgtaattaatttataataaagtc-aaaacagttttcttttatggta 95644  T
Q  160 ataattctcttttatggtatgcttaa 185  Q
    ||||||| ||||||||||||| ||||    
T  95643 ataattcccttttatggtatgtttaa 95618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 22987 - 23114
Alignment:
Q  58 gcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatga 157  Q
    |||||| ||||  |||||||||||||||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||| |||  |||||||     
T  22987 gcactggttaaggatatgaaaaaggaaattatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgt 23086  T
Q  158 taataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||||||| ||||    
T  23087 taataattctcttttatggtatgtttaa 23114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 14918 - 15049
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||| |||| ||||| ||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||  ||||    
T  14918 cggggcactggttaaagatataaaaaaagaaattatatagtagttaatgcactgaaattgtgtagttaatttataataaagtcaaaaacagtttcctttt 15017  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||||||||    
T  15018 atggtaataattcccttttatggtatgcttaa 15049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 19732 - 19609
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |||  ||||| ||||||| |||||||    
T  19732 atatgaaaaaagaaattatataataattaatgcattgaaattgtgtaatgaatttataataaagtcaaaaacagtttccttttacgataatagttctctt 19633  T
Q  171 ttatggtatgcttaattagtgtcc 194  Q
    ||||| |||| ||||| |||||||    
T  19632 ttatgatatgattaatcagtgtcc 19609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 316 - 446
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||  || ||     
T  316 gggcactggttaagcatatgaaaaagaaaattatataatagttaatgcattgaaattgtgtaataaatttataataaagtcaaaaacagtttccttctac 415  T
Q  156 gataataattctcttttatggtatgcttaat 186  Q
    | |||||||||||||||||| |||| |||||    
T  416 ggtaataattctcttttatgatatgattaat 446  T

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Target: scaffold0038 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 25758 - 25871
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||| ||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  25758 atatgaaaaaggaa-ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattccctt 25856  T
Q  171 ttatggtatgcttaa 185  Q
    ||||||||| |||||    
T  25857 ttatggtatccttaa 25871  T

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Target: scaffold0325 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 17617 - 17504
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||||||  ||    
T  17617 atatgaaaaagaaaattatatagtagctaatgcattgaaattgtg-aattaatttataataaagtcaaaaacagttttcttttatgataataattccttt 17519  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||| ||||    
T  17518 ttatggtatgtttaa 17504  T

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Target: scaffold0188 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 6273 - 6143
Alignment:
Q  55 ggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttta 154  Q
    ||||||||| ||||  ||||||||||||||| |||||| |||||||||||||| |||| ||||||||| |||||||||||||||||||| |||  |||||    
T  6273 ggggcactggttaaggatatgaaaaaggaaactatatagtagttaatgcattggaattgtgtaattaaattataataaagtcaaaaacagtttcctttta 6174  T
Q  155 tgataataattctcttttatggtatgcttaa 185  Q
    || ||||||| | ||||||||||||| ||||    
T  6173 tggtaataatccccttttatggtatgtttaa 6143  T

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Target: scaffold0050 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 69265 - 69378
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    ||||||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| || |||| ||||| | |||||||| ||||    
T  69265 atatgaaaaagtaaattatatagtagttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataatt-tctt 69363  T
Q  171 ttatggtatgcttaa 185  Q
    |||||||||||||||    
T  69364 ttatggtatgcttaa 69378  T

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Target: scaffold0050; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 33863 - 33707
Alignment:
Q  36 aaatgttaacccatgcctcggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagt 135  Q
    ||||| ||| ||||||||||| |||||  ||||  |||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||| ||  |    
T  33863 aaatgctaatccatgcctcggagcacttgttaagtatattaaaatggaaattatataatagttaatacattgaaattgtgtaattaatttataa-aagat 33765  T
Q  136 caaaaacaattttattttatgataataattctcttttatggtatgcttaattagtgtc 193  Q
     ||||| | |||| ||||||| |||||||| ||| || || ||||||||| |||||||    
T  33764 aaaaaatagttttcttttatgctaataattttctcttttgatatgcttaactagtgtc 33707  T

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Target: scaffold0003 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 53849 - 53718
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |||| |||||||| | |||  ||||    
T  53849 cggggcactggttaagggtatgaaaaaggaaattatatagtagttaatgcattaaaattgtgtaattaatttatcataatgtcaaaaatagtttcctttt 53750  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    ||| ||||||||| ||||||||||||| ||||    
T  53749 atggtaataattcccttttatggtatgtttaa 53718  T

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Target: scaffold0002 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 147052 - 146937
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctctt 170  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||| |||| | ||| | ||||||||   ||    
T  147052 atatgaaaaaggaaattatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttcttt 146953  T
Q  171 ttatggtatgcttaat 186  Q
    ||||||||||||||||    
T  146952 ttatggtatgcttaat 146937  T

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Target: scaffold0425 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 10772 - 10863
Alignment:
Q  94 tagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||| | ||||||||||||||||    
T  10772 tagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaa 10863  T

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Target: scaffold0014 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 68454 - 68323
Alignment:
Q  54 cggggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttatttt 153  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||||||| ||||| ||||| ||| |||||||||||| |||| || |||  ||||    
T  68454 cggggcactggttaaggatatgaaaaatgaaattatatagtagttaatgcattaaaattgtgtaaataaattataataaagttaaaatcagtttcctttt 68355  T
Q  154 atgataataattctcttttatggtatgcttaa 185  Q
    | | ||||||||| ||||||||||||||||||    
T  68354 aaggtaataattcccttttatggtatgcttaa 68323  T

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Target: scaffold0206 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 11117 - 11032
Alignment:
Q  71 atatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatg 156  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||||    
T  11117 atatgaaaaaggaaattatatattagttaatgcattgaaattgtgtaattaaactataataaagtcaaaaacagtttcattttatg 11032  T

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Target: scaffold0674 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 8059 - 7959
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||    
T  8059 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttat 7960  T
Q  156 g 156  Q
    |    
T  7959 g 7959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 7312 - 7412
Alignment:
Q  56 gggcactgcttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttat 155  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||    
T  7312 gggcactggttaaggatatgaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttat 7411  T
Q  156 g 156  Q
    |    
T  7412 g 7412  T

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Target: scaffold0007 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 233918 - 234006
Alignment:
Q  97 ttaatgcattgaaattatgtaattaatttataataaagtcaaaaacaattttattttatgataataattctcttttatggtatgcttaa 185  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| || |||  |||||||| |||||||  ||||||||||||| ||||    
T  233918 ttaattcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaa 234006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 1415 - 1462
Alignment:
Q  76 aaaaaggaaattatataatagttaatgcattgaaattatgtaattaat 123  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  1415 aaaaaagaaattatataatagttattgcattgaaattgtgtaattaat 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 5072 - 5136
Alignment:
Q  65 ttaaaaatatgaaaaaggaaattatataatagttaatgcattgaaattatgtaattaatttataa 129  Q
    |||| ||||| |||||  |||||||||| ||||||||  ||||||||| ||||||||||||||||    
T  5072 ttaagaatattaaaaaaaaaattatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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