View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_74 (Length: 304)
Name: NF17134_high_74
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_74 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 8035946 - 8036214
Alignment:
| Q |
18 |
aatgagaagcaagatgagttggtatttatagctgatgactacaagagctttatgaaattagtatgaacaaaagatgctagctgttagctaaccatttact |
117 |
Q |
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| T |
8035946 |
aatgagaagcacgatgagttggtatttatagctgatgactacaagagctttatgaaattagtatgaacaaaagatgctagctgttagctaaccatttact |
8036045 |
T |
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| Q |
118 |
aatcaagtactgatggattaccacatacagacccatttttaatggtacgaataagatagagaattagaaacaaaatattagatagggctcaataggaata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
8036046 |
aatcaagtactgatggattaccacatacagacccatttttaatggtacgaataagatagagaattagaaacaaaatattacatagggctcaataggaata |
8036145 |
T |
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| Q |
218 |
agatgaaattaatattagagataagataaacatatatgtatgttataatgtgttcaatgtgcatatgat |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
8036146 |
agatgaaattaatattagagataagataaacatatatgtatgttataatgtgtttaatgtgcatatgat |
8036214 |
T |
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