View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_78 (Length: 294)
Name: NF17134_high_78
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_78 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 6 - 278
Target Start/End: Complemental strand, 24572159 - 24571887
Alignment:
| Q |
6 |
cttatagtcatggtttaagagacatatggtgttgtttcccacaccctacccctcctcccctatttattataactcatgcgcaacaattggtcaacaacat |
105 |
Q |
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||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
24572159 |
cttatagtcatggtttaaggaacatatggtgtggtttcccacaccctacccctcctcccctatttattataactcatgcacaacaattggtcaacaacat |
24572060 |
T |
|
| Q |
106 |
caccatttttctcccccaactccttttaaaaacccctccttctccttttctcctcataacacatttctaaccattctatatacctcattcactacacacc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
24572059 |
caccatttttctcccccaactccttttaaaaacccctccttctccttttctcctcataacacatttctaaccattctaaatacctcattcactacacacc |
24571960 |
T |
|
| Q |
206 |
catcttctcaacctcactctacattttcttatggtcatgggagcatttcaccatttcaaaccaatttcaaagt |
278 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24571959 |
catcttctcaacctcactctacatttccttatggtcatgggagcatttcaccatttcaaaccaatttcaaagt |
24571887 |
T |
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