View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_81 (Length: 287)
Name: NF17134_high_81
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_81 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 18 - 278
Target Start/End: Original strand, 22379378 - 22379638
Alignment:
| Q |
18 |
gcagcccatgctcctagaaactgcatagctcccattccatcacagatacaatgacaaaggcgtaaaccgaggctaaatccaccacatgtgaagattgtta |
117 |
Q |
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| T |
22379378 |
gcagcccatgctcctagaaactgcatagctcccattccatcacagatacaatgacaaaggcgtaaaccgaggctaaatccaccacatgtgaagattgtta |
22379477 |
T |
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| Q |
118 |
cctgagctataacaagtggcatttccaacactttgtattgttcttcatttggaaatttgaatatcaatggttcccaagatggatttggagcagcaaaatc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22379478 |
cctgagctataacaagtggcatttccaacactttgtattgttcttcatttggaaatttgaatatcaatggttcccaagatggatttggagcagcaaaatc |
22379577 |
T |
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| Q |
218 |
acctagttcagataaagctatgtttgatcttgcttcaaccattaacgctccttgttcttct |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22379578 |
acctagttcagataaagctatgtttgatcttgcttcaaccattaacgctccttgttcttct |
22379638 |
T |
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