View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_82 (Length: 282)
Name: NF17134_high_82
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_82 |
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Alignment Details
Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 41567101 - 41567207
Alignment:
| Q |
64 |
taagattttgttgaatctcatgtttgccaagagaggtttttcaattcttccctaaagcttcttacggtagaccaagaaataacctcctttttatagagat |
163 |
Q |
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| T |
41567101 |
taagattttgttgaatctcaagtttgccaagagaggtttttcaattcttccctaaagcttcttacggtagaccaagaaataacctcctttttatagagat |
41567200 |
T |
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| Q |
164 |
tcatgac |
170 |
Q |
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||||||| |
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| T |
41567201 |
tcatgac |
41567207 |
T |
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Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 41434411 - 41434313
Alignment:
| Q |
69 |
ttttgttgaatctcatgtttgccaagagaggtttttcaattcttccctaaagcttcttacggtagaccaagaaataacctcctttttatagagattcatg |
168 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41434411 |
ttttgttgaatctcatgtttaccaagagaggtttttcaattcttacctaaag---cttacggtagaccaagaaataacctcctttttataaagattcatg |
41434315 |
T |
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