View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_90 (Length: 258)
Name: NF17134_high_90
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_90 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1328194 - 1328429
Alignment:
| Q |
1 |
aggagtgaagagatcactgagacaattcacattcggcgccggaaaaaccgccggccgtaactgttacggccgcatcacctccttccaccgcggtggcggc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
1328194 |
aggagtgaagagatcactgagacaattcacattcggcgccggaaaaaccgccggccgtaactgttacggccgcatcacctccttccaccgcggcggcggc |
1328293 |
T |
|
| Q |
101 |
cataaacgtttacatcgagtcatcgatctcaagcgcaacacttcttcttccgtcggtatcgtcgaacgcatcgaatacgatcctaaccgttcatctcgta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1328294 |
cataaacgtttacatcgagtcatcgatctcaagcgcaacacttcttcttccgtcggtatcgtcgaacgcatcgaatacgatcctaaccgttcatctcgta |
1328393 |
T |
|
| Q |
201 |
tcgctctcgttcgttggctcaacggtatcaatccac |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
1328394 |
tcgctctcgttcgttggctcaacggtatcaatccac |
1328429 |
T |
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