View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_high_97 (Length: 249)
Name: NF17134_high_97
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_high_97 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 49082812 - 49082605
Alignment:
| Q |
18 |
gttggattggaatataagtaagtatattgacattgacatacagtagtatttcttctccacacatgctgccacaggttcctaagctcattcctgcgaactg |
117 |
Q |
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| T |
49082812 |
gttggattggaatataaataagtatattgacat------acagtagtatttcttctccacacatgctgccacaagttcctaagctcattcctgcgaactg |
49082719 |
T |
|
| Q |
118 |
gtttaatgagaaaatcgacagccccgttgagcatgaatttgaatacagtgctaactgaatcttgagaagacatcactgcaaattacatttacatacatga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49082718 |
gtttaatgagaaaatcgacagccccgttgagcatgaatttgaatacagtgctaactgaatcttgagaagacatcactgcaaattacatttacatacatga |
49082619 |
T |
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| Q |
218 |
tgtaatgaggaaac |
231 |
Q |
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|||||||||||||| |
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| T |
49082618 |
tgtaatgaggaaac |
49082605 |
T |
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