View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17134_low_109 (Length: 242)
Name: NF17134_low_109
Description: NF17134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17134_low_109 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9888357 - 9888585
Alignment:
| Q |
1 |
tcgtagctattttactactatctctatctttaggtataacccttttcgtttttctctcttacaatgcaacccaattgaacaattacgcgaaaactgatct |
100 |
Q |
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| T |
9888357 |
tcgtagctattttactactatctttatctttaggtataacccttttcgtttttctctcttacaatgcaacccaattgaacaattacgcgaaaactgatct |
9888456 |
T |
|
| Q |
101 |
gggttttgatgattatccgttttcgaagctcaggaatttggttatggttgctggtcattcggtttatatgagtagtggttgtgggaagattgagaaagag |
200 |
Q |
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||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9888457 |
gggttttgatgattacccgttttcgaagctgaggaatttggttatggttgctggtcattcggtttatatgagtagtggttgtgggaagattgagaaagaa |
9888556 |
T |
|
| Q |
201 |
gattcgtggtatttggagagttatcagaa |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
9888557 |
gattcgtggtatttggagagttatcagaa |
9888585 |
T |
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