View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17135_high_11 (Length: 283)
Name: NF17135_high_11
Description: NF17135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17135_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 36025621 - 36025880
Alignment:
| Q |
1 |
cctaatgaagcaggaattgaacctgttaacctattattgaagagttgaacacctcttagattgttgagaagtcctaatgttgaagggattgaaccaccaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025621 |
cctaatgaagcaggaattgaacctgttaacctattattgaagagttgaacacctcttagattgttgagaagtcctaatgttgaagggattgaaccaccaa |
36025720 |
T |
|
| Q |
101 |
tttggttattatgaagactaagctttcttagaccttcaagttgaccaatcctttcagtgattctccccttcaatcctttccatggaagctgaattataat |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025721 |
tttggttattatgaagactaagctttctaagaccttcaagttgaccaatcctctcagtgattctccccttcaatcctttccatggaagctgaattataat |
36025820 |
T |
|
| Q |
201 |
cacttttccttgagcacatttgattccaacccaacctccagaacaagctccaaagccact |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025821 |
cacttttccttgagcacatttgattccaacccaacctccagaacaagctccaaagccact |
36025880 |
T |
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