View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17138_low_5 (Length: 242)
Name: NF17138_low_5
Description: NF17138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17138_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 25300495 - 25300393
Alignment:
| Q |
131 |
tttgttggaggttattttggcttgtaatcgatttgtttattttttattagaatacccctttattgtaacgatgtattttggatcttttaatgtattagta |
230 |
Q |
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| T |
25300495 |
tttgttggaggtttttttggcttgtaatagatttgtttattttttattagacaacccctttattgtaacgatgtattttggatctttaaatgtatgagta |
25300396 |
T |
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| Q |
231 |
tat |
233 |
Q |
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||| |
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| T |
25300395 |
tat |
25300393 |
T |
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