View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17139_high_12 (Length: 245)
Name: NF17139_high_12
Description: NF17139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17139_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 37446934 - 37447094
Alignment:
| Q |
48 |
aggaaataatggtacacatatacttgtttgtcaaataaatattatttacattatttgtaaaatttcatttatctatatcatcgcgacatgataaatttta |
147 |
Q |
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| T |
37446934 |
aggaaataatggtacacatatacttgtttgtcaaataaatattatttacattatttgtaaaatttcatttatctatatcatcgcgacatgataaatttta |
37447033 |
T |
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| Q |
148 |
ctttgacatgattaatttgagtacgagaccaacaatgcatagctttgcaataaagcacaac |
208 |
Q |
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| T |
37447034 |
ctttgacatgattaatttgagtacgagaccaacaatgcatagctttgcaataaagcacaac |
37447094 |
T |
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