View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17139_high_2 (Length: 485)
Name: NF17139_high_2
Description: NF17139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17139_high_2 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 334; Significance: 0; HSPs: 43)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 19 - 460
Target Start/End: Original strand, 10034625 - 10035066
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034625 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
10034724 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034725 |
aaagaacaaagccatctgtaacggaatggggtctccaatatttgacagcactttccaacttgagtattgaaaagggtgatgatatagttaacaccttgat |
10034824 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034825 |
gaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
10034924 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaa |
418 |
Q |
| |
|
|||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
10034925 |
ctccaaactctctgtttttggaattgtcatcaacttgagacattgccagaaaactgcctcccttcctcgctgaaatcacttagattgtgggattgtaaaa |
10035024 |
T |
|
| Q |
419 |
agctagagtcattaccagaagacagcctccctgactctctta |
460 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10035025 |
agcttgagtcattaccagaagacagcctcactgactctctta |
10035066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 19 - 461
Target Start/End: Original strand, 10263323 - 10263765
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
10263323 |
ctcaccgctcttgaaaggttgtttctaacatgtgcagagttgtcattttctgaaggagtttgtctacctcccaaattacaatcaattgagatttctaccc |
10263422 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
10263423 |
aaaaaacaacaccgccggttacggaatggggtctccaatatttgacagcactttcctacttgactattcaaaagggtgatgatatatttaacaccttgat |
10263522 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||| | || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10263523 |
gaaggagtcattgctacccatctcccttttgtatctacgtgtctttgatctctctgaaatgaagtcctttgatggaaatgggcttcaacacctctcctct |
10263622 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaa |
418 |
Q |
| |
|
|||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||| ||| |
|
|
| T |
10263623 |
ctccaatatctctgttttttcttttgtcatcaacttgagacattgccagaaaactgcctcccttcctcgctgaaatcacttctattgcttggatgtgaaa |
10263722 |
T |
|
| Q |
419 |
agctagagtcattaccagaagacagcctccctgactctcttaa |
461 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10263723 |
agctagagtcattaccagaagacagcctcccttcctctcttaa |
10263765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 467
Target Start/End: Original strand, 10129544 - 10129992
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
10129544 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattgagatacagtcca |
10129643 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
|||||||| ||| |||| || ||||||||||| ||| ||||||| || ||||| ||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
10129644 |
aaagaacagcaccgcctgtgacagaatggggtcttcaagatttgaccgctctttcaagattgagtattggaaagggtgatgatatagttaacaccttgat |
10129743 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10129744 |
gaaggagtcattgctacccatctcccttgtgtatctatatatcagggatttcgatgaaatgaagtcctttgatggaaatgggcttcgacacctcttctct |
10129843 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcga-tgtaaa |
417 |
Q |
| |
|
||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | || || || ||| || |
|
|
| T |
10129844 |
ctccaacatctcttcttttggaattgtcatcaacttgagacattgccagaaaactgcctcccttcctcgctgaaatcacttgactt-ttgggattgtgaa |
10129942 |
T |
|
| Q |
418 |
aagctagagtcattaccagaagacagcctccctgactctcttaagcaact |
467 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
10129943 |
aagctagagtcattaccagaagacagcctccctgattctcttatgcaact |
10129992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 459
Target Start/End: Original strand, 9841480 - 9841920
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |
|
|
| T |
9841480 |
ctcacagctcttgaaatgttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattgctatttctaccc |
9841579 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
||| |||| ||| | || ||||||||||||| |||||||||||| |||||||||| ||| |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
9841580 |
aaaaaacagcaccgccggttacggaatggggtcaccaatatttgacggcactttcctacttgcgaattgataagggtgatgatatatttaacaccttgat |
9841679 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9841680 |
gaaggagtcgttgctacccatctcccttgtgtctctaaatatcagggatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
9841779 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaa |
418 |
Q |
| |
|
|||||| ||||| |||| | ||||| | |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||| |
|
|
| T |
9841780 |
ctccaatatctcgatttttcgttttgtccacagcttgagtcattgccagaaaactgcctcccttcctcgctgaaatcacttatattgtttcaatgtgaaa |
9841879 |
T |
|
| Q |
419 |
agctagagtcattaccagaagacagcctccctgactctctt |
459 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9841880 |
agcttgagtcattaccagaagacagcctccctgactctctt |
9841920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 10431488 - 10431040
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
||||| |||||||||| |||| || | |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |
|
|
| T |
10431488 |
ctcaccgctcttgaaaagttgcatatgaaatgtcaaaagctgtcattttgtgaaggagtttgtctacctcccaaattacaatcaatttggttttcatctc |
10431389 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
||||| || || | || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
10431388 |
gaagaataactccgccggttacggaatggggtctccaatatttgacagcactttccttattgacaattcaaaagggtgatgatatatttaacaccttgat |
10431289 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10431288 |
gaaggagtcgttgctacccatctcccttgtgtatctatatatcactgatctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctct |
10431189 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaa |
418 |
Q |
| |
|
|||||| |||||||||| || |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||| ||| |
|
|
| T |
10431188 |
ctccaaactctctgtttttggttttgtgatcaacttgagacattgccagaaaactgcctcccttcctcgctgaaatcacttgatttgtggaaatgtgaaa |
10431089 |
T |
|
| Q |
419 |
agctagagtcattaccagaagacagcctccctgactctcttaagcaact |
467 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10431088 |
agcttgagtcattaccagaagacagcctccctgactctcttaagcaact |
10431040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 458
Target Start/End: Original strand, 10520107 - 10520546
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
|||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |
|
|
| T |
10520107 |
ctcacagctcttgaaaggttgactctagattgtgtagagttgtcattttgtgaaggagtttgtctacctcccaaattgcaatcaattaagatttctaccc |
10520206 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
||| |||| ||| | || |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||| |
|
|
| T |
10520207 |
aaaaaacagcaccgccggttacggaatggggtctccaatatttgacagcactttccgacttgggtattgtaaagggtgatgatatatttaacaccttgat |
10520306 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
10520307 |
gaaggagtcattgctacccatctcccttgtgactctaactatcagggatctctctgaaatgaagtcctttgatggaaaagggcttcgtcacctctcctct |
10520406 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaa |
418 |
Q |
| |
|
||||||| |||| ||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| ||| |
|
|
| T |
10520407 |
ctccaacgtctccgtttttgggattgtgaacaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttgatttgtggaaatgtgaaa |
10520506 |
T |
|
| Q |
419 |
agctagagtcattaccagaagacagcctccctgactctct |
458 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
10520507 |
agcttaaatcattaccagaagacagcctccctgactctct |
10520546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 56 - 467
Target Start/End: Original strand, 9980125 - 9980536
Alignment:
| Q |
56 |
agttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcca |
155 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| || ||| |||| ||| | || ||||||||||||||||| |
|
|
| T |
9980125 |
agttgtcattttctgaaggagtttgtctacctctcaaattacaatcaattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctcca |
9980224 |
T |
|
| Q |
156 |
atatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctg |
255 |
Q |
| |
|
||||||||||||||||| | |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9980225 |
atatttgacagcacttttcgacttgagaattgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatcta |
9980324 |
T |
|
| Q |
256 |
gatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttg |
355 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||| |||||| |
|
|
| T |
9980325 |
cgtatctgtgatctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttg |
9980424 |
T |
|
| Q |
356 |
agacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactc |
455 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||| | | ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
9980425 |
agacattgccagaaaactgcctcccttcctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatc |
9980524 |
T |
|
| Q |
456 |
tcttaagcaact |
467 |
Q |
| |
|
||||||| |||| |
|
|
| T |
9980525 |
tcttaaggaact |
9980536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 25 - 467
Target Start/End: Complemental strand, 10361242 - 10360800
Alignment:
| Q |
25 |
gctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaa |
124 |
Q |
| |
|
||||||||| |||||| |||| | || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |
|
|
| T |
10361242 |
gctcttgaacggttgactctagattggccagagttgtcgttttgtgaaggagtttgtctacctcccaaattacaatcaattatgatacagtccaaaagaa |
10361143 |
T |
|
| Q |
125 |
caaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaagga |
224 |
Q |
| |
|
|| || |||| || ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10361142 |
cagcactgcctgtgacagaatggggtctccaatatttgacagcactttccaacttgggtattggaaagggtgatgatatagttaacaccttgatgaagga |
10361043 |
T |
|
| Q |
225 |
gtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaa |
324 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10361042 |
gtcattgctacccgtctcccttgtgtctctggaaatccatcatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaa |
10360943 |
T |
|
| Q |
325 |
catctc-tgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagcta |
423 |
Q |
| |
|
|||||| | |||| ||| |||| | |||||| |||| ||||||||||||||||||||||||||||||| |||| ||| | | | ||| ||||||| |
|
|
| T |
10360942 |
catctcgtattttttgaa-tgtcgacagcttgagtcattaccagaaaactgcctcccttcctcgctgaaatcacttacattttatggttgtgaaaagctt |
10360844 |
T |
|
| Q |
424 |
gagtcattaccagaagacagcctccctgactctcttaagcaact |
467 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10360843 |
aaatcattaccagaagacagcctccctgactctcttaaggaact |
10360800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 56 - 404
Target Start/End: Original strand, 9852398 - 9852746
Alignment:
| Q |
56 |
agttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcca |
155 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| | ||||| |||||| || ||| |||| ||| | || ||||||||||||||||| |
|
|
| T |
9852398 |
agttgtcattttctgaaggagtttgtctacctcccaaattaagaacaattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctcca |
9852497 |
T |
|
| Q |
156 |
atatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctg |
255 |
Q |
| |
|
|||||||||||| ||||| | |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9852498 |
atatttgacagctctttcatcattgtggattgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctcta |
9852597 |
T |
|
| Q |
256 |
gatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttg |
355 |
Q |
| |
|
|||||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| | |||||| | |||| |
|
|
| T |
9852598 |
aatatcatggttctctctgaaatgaagtcctttgatggaaatgggcttcgacacctcttctctctccaatatctctattttgcgggttgtcaacagcttg |
9852697 |
T |
|
| Q |
356 |
agacattgccagaaaactgcctcccttcctcgctgaaattacttcaatt |
404 |
Q |
| |
|
| ||||||||||||||||| |||||||||| ||||||| |||| |||| |
|
|
| T |
9852698 |
ggtcattgccagaaaactgcttcccttcctcactgaaatcacttaaatt |
9852746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 56 - 450
Target Start/End: Original strand, 10583172 - 10583566
Alignment:
| Q |
56 |
agttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcca |
155 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||| |||||| |||| ||| | || ||||||||||||||| | |
|
|
| T |
10583172 |
agttgtcattttctgaaggagtttgtctacctctcaaattacgatcaattgtgatttttacccaaaaaacagcaccgccggttacggaatggggtctcaa |
10583271 |
T |
|
| Q |
156 |
atatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctg |
255 |
Q |
| |
|
| || | ||||| ||||| | || |||| ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |
|
|
| T |
10583272 |
agatctaacagctctttcaagctggagtattggaaaggatgatgatatatttaacaccttgatgaaggagtcgttgctacccatctcccttgtgtatcta |
10583371 |
T |
|
| Q |
256 |
gatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttg |
355 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||| |||||| |
|
|
| T |
10583372 |
tatatctggaatctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaatatctctgttttttcatttgtcatcaacttg |
10583471 |
T |
|
| Q |
356 |
agacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcga-tgtaaaaagctagagtcattaccagaagacagcctccct |
450 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||| ||| | | || ||| ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10583472 |
agacattgccagaaaactgcctcccttcctcactgaaatcactttcatt-tatggattgtgaaaagcttgggtcattaccagaagacagcctccct |
10583566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 10373289 - 10372916
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
||||| |||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |
|
|
| T |
10373289 |
ctcaccgctcttgaaaggttgagtttgggatgtcgagagttgtcattttgtgaaggagtttgtctacctctcaaattacaatcaatttggatttcatctc |
10373190 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
||||| || ||| | || |||||||||||||||||| || | ||||| || || |||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
10373189 |
gaagaataacaccgccggttacggaatggggtctccaagatctaacagctctgtcaagcttgagtattagaaaggatgatgatatagttaacaccttgat |
10373090 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10373089 |
gaaggagtcgttgctacccatctcccttgtgcatctacgtatcaattatctctctgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
10372990 |
T |
|
| Q |
319 |
ctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaa |
392 |
Q |
| |
|
||| || |||||| |||| |||||| | || |||||| |||| |||||| || ||||||||||||| ||||| |
|
|
| T |
10372989 |
ctcaaaaatctctatttttttaattgtgaaaagcttgagtcattaccagaagacagcctcccttcctctctgaa |
10372916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 10666088 - 10666390
Alignment:
| Q |
19 |
ctcacagctcttgaaaggttgaatctaaaatgtgcagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatccc |
118 |
Q |
| |
|
||||| |||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | |
|
|
| T |
10666088 |
ctcactgctcttgaaaagttgattctaagatgtgcacagttgtcattttgtgaaggagtttgtctacctcccaaattacaaacaattgtgatttcatctc |
10666187 |
T |
|
| Q |
119 |
aaagaacaaaaccatctgtaacggaatggggtctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgat |
218 |
Q |
| |
|
|||||| || || | || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10666188 |
aaagaataactccgccggttacggaatggggtctccaatatttgacagcactttcctacttgagtattgaaaagggtgatgatatatttaacaccttgat |
10666287 |
T |
|
| Q |
219 |
gaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctct |
318 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| ||| | |||| | ||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
10666288 |
gaaggagtcgttgctacccatatcccttgtgtctctaacgttcagagctctctgcaatttgaagtcctttaatggaaatgggcttctacacctctcctct |
10666387 |
T |
|
| Q |
319 |
ctc |
321 |
Q |
| |
|
||| |
|
|
| T |
10666388 |
ctc |
10666390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 55 - 399
Target Start/End: Original strand, 10503240 - 10503584
Alignment:
| Q |
55 |
gagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcc |
154 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| | | || ||| | |||||||||| |
|
|
| T |
10503240 |
gagttatcattttgtgaaggagtttgtcttcctcccaaattacaatcaattgatatttggtcccaaagaacaacaactcctataatgaaatggggtcttg |
10503339 |
T |
|
| Q |
155 |
aatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctct |
254 |
Q |
| |
|
|| || |||| || ||||| | ||| ||||| | |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
10503340 |
aagatctgaccgctctttcaagactgaaaattggagcaggtgatgatatatttaacaccttgatgaaggagtcgttgcttcccatctcccttgcatctct |
10503439 |
T |
|
| Q |
255 |
ggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaactt |
354 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||| | ||| |
|
|
| T |
10503440 |
atatatcagtgatctctatgaaatgaagtcctttgatggaaatgggcttcgacaaatctcctctctcgaaaatcttgaatttcttaattgtctacagctt |
10503539 |
T |
|
| Q |
355 |
gagacattgccagaaaactgcctcccttcctcgctgaaattactt |
399 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10503540 |
gagtcattgccagaaaactgcctcccttcctcgctgaaattactt |
10503584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 467
Target Start/End: Original strand, 11771898 - 11772304
Alignment:
| Q |
61 |
tcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatt |
160 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| || || ||||||| ||||| |||| | || || ||||||||||||||| | |
|
|
| T |
11771898 |
tcattttgtgaaggagtttgtctacctcccaacttacaatcaattgtgagtttttcccaaataacaacaccaccagttacagaatggggtctccaaaacc |
11771997 |
T |
|
| Q |
161 |
tgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatat |
260 |
Q |
| |
|
|| | ||||| |||| |||| ||| | |||| ||||||| | |||||||||||| |||| ||||| || |||||||||||| ||| ||| |
|
|
| T |
11771998 |
aaaccactctttcgaaattggttattggaaatgatgataatatagtcaccaccttgatgaaagagttgttgctgcctatctcccttgtggacctgtctat |
11772097 |
T |
|
| Q |
261 |
caatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagaca |
360 |
Q |
| |
|
|| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | || ||| || |
|
|
| T |
11772098 |
cattgatctctatgaaatgaagtcttttgatggaaatgggcttcgacacctctcctctctccaatatctctatttttggaattgtcaacagctcgagtca |
11772197 |
T |
|
| Q |
361 |
ttgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctctta |
460 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||| ||| ||| | |||| ||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
11772198 |
ttgccagaaaactgcctcccttcctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctctta |
11772297 |
T |
|
| Q |
461 |
agcaact |
467 |
Q |
| |
|
||||||| |
|
|
| T |
11772298 |
agcaact |
11772304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 61 - 467
Target Start/End: Complemental strand, 11779387 - 11778981
Alignment:
| Q |
61 |
tcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaatatt |
160 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| || || ||||||| ||||| |||| | || || ||||||||||||||| | |
|
|
| T |
11779387 |
tcattttgtgaaagagtttgtctacctcccaaattacaatcaattgtgagtttttcccaaataacaacaccaccagttacagaatggggtctccaaaacc |
11779288 |
T |
|
| Q |
161 |
tgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatat |
260 |
Q |
| |
|
|| | ||||| | || |||| ||| | |||| ||||||| | ||||||||||||||| | |||||||| |||||||||||| ||| ||| |
|
|
| T |
11779287 |
aaaccactctttcagaactggttattggaaatgatgataatatagtcaccaccttgatgaaggatttgttgctacctatctcccttgtggacctgtctat |
11779188 |
T |
|
| Q |
261 |
caatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagaca |
360 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||| |||||||||| | || ||| || |
|
|
| T |
11779187 |
cattgatctctatgaaatgaagtccttcgatggaaatgggcttcgacacctctcctctctcgaatatctctatttttggaattgtcaacagctcgagtca |
11779088 |
T |
|
| Q |
361 |
ttgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctctta |
460 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||| ||| ||| | |||| ||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
11779087 |
ttgccagaaaactgcctcccttcctcgttgaaatcactttcatttcaaatgtgtgaggagcttgagtcattaccggaagacagcctccccgactctctta |
11778988 |
T |
|
| Q |
461 |
agcaact |
467 |
Q |
| |
|
||||||| |
|
|
| T |
11778987 |
agcaact |
11778981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 393
Target Start/End: Original strand, 10091457 - 10091784
Alignment:
| Q |
57 |
gttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| || || ||| | || |||||||||||||||||| |
|
|
| T |
10091457 |
gttgtcattttgtgaaggagtttgtctacctcccaaattacaaaagattgttattttttccaaaaaaataacaccgccggttacggaatggggtctccaa |
10091556 |
T |
|
| Q |
157 |
tatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctgg |
256 |
Q |
| |
|
|| | || | |||||| ||||| ||| || ||| | |||||||||||||| |||| ||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
10091557 |
gatctaaccactctttccgaattgatgattaaagaggcaggtgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctgg |
10091656 |
T |
|
| Q |
257 |
atatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttga |
356 |
Q |
| |
|
|| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | | |||| | ||| | |
|
|
| T |
10091657 |
at---------ctctataagatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttca |
10091747 |
T |
|
| Q |
357 |
gacattgccagaaaactgcctcccttcctcgctgaaa |
393 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10091748 |
gtcattgccagaaaactgcctcccttcctcgctgaaa |
10091784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 393
Target Start/End: Original strand, 10198339 - 10198666
Alignment:
| Q |
57 |
gttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctccaa |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| || || ||| | || |||||||||||||||||| |
|
|
| T |
10198339 |
gttgtcattttgtgaaggagtttgtctacctcccaaattacaaaagattgttattttttccaaaaaaataacaccgccggttacggaatggggtctccaa |
10198438 |
T |
|
| Q |
157 |
tatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctgg |
256 |
Q |
| |
|
|| | || | |||||| ||||| ||| || ||| | |||||||||||||| |||| ||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
10198439 |
gatctaaccactctttccgaattgatgattaaagaggcaggtgatatagttaacaacttggtgacggagtcgttgctacccatctcccttgtgtctctgg |
10198538 |
T |
|
| Q |
257 |
atatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttga |
356 |
Q |
| |
|
|| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | | |||| | ||| | |
|
|
| T |
10198539 |
at---------ctctataagatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacgtctcgatttctgtcaatgtcgacagcttca |
10198629 |
T |
|
| Q |
357 |
gacattgccagaaaactgcctcccttcctcgctgaaa |
393 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10198630 |
gtcattgccagaaaactgcctcccttcctcgctgaaa |
10198666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 183 - 399
Target Start/End: Original strand, 10192882 - 10193097
Alignment:
| Q |
183 |
aattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaag |
282 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | || ||| | ||||||||||||||||||||||||||| |||| ||||||| || | |||||| |
|
|
| T |
10192882 |
aattgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctacccatctcccttgtgtctctgaatattggtgatctctataacatgaag |
10192981 |
T |
|
| Q |
283 |
tcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctccctt |
382 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| || |||| ||| | |||||||| |||||||| |||| || ||||| ||| | |||| |
|
|
| T |
10192982 |
tcctttgatggaaatgggcttcaacacctctcctttctcgaa-atcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcgttcctt |
10193080 |
T |
|
| Q |
383 |
cctcgctgaaattactt |
399 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
10193081 |
cctcgctgaaatcactt |
10193097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 183 - 399
Target Start/End: Original strand, 10085962 - 10086177
Alignment:
| Q |
183 |
aattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaag |
282 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| | || ||| | |||||| |||||||||||||||||||| |||| ||||||| || | |||||| |
|
|
| T |
10085962 |
aattgaaaaggatggtgatatagttaacaccttggtaaaagagccgttgctaaccatctcccttgtgtctctgaatattggtgatctctataacatgaag |
10086061 |
T |
|
| Q |
283 |
tcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcctccctt |
382 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| || |||| ||| | |||||||| |||||||| |||| || ||||| ||| | |||| |
|
|
| T |
10086062 |
tcctttgatggaaatgggcttcaacacctctcctttctcgaa-atcttcactttcgtaattgtcaacaacttgagccatttcctgaaaattgcgttcctt |
10086160 |
T |
|
| Q |
383 |
cctcgctgaaattactt |
399 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
10086161 |
cctcgctgaaatcactt |
10086177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 461
Target Start/End: Original strand, 10531561 - 10531845
Alignment:
| Q |
177 |
attgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaa |
276 |
Q |
| |
|
||||||| ||| || || ||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| | ||||| |||| |
|
|
| T |
10531561 |
attgacagttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaa |
10531660 |
T |
|
| Q |
277 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcc |
376 |
Q |
| |
|
|| ||||| ||||| |||||||| ||||||||||||||||||||| || |||| ||| ||||| | |||||| ||||||||||||| |||| |
|
|
| T |
10531661 |
ataaagtcatttgaaggaaatggacttcgacacctctcctctctcaaaaatcttcactttcttaattgcttggagcttgagtcattgccagaaaattgcc |
10531760 |
T |
|
| Q |
377 |
tcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaa |
461 |
Q |
| |
|
|||||||||||||||| | ||||||||| | | ||| || || ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10531761 |
tcccttcctcgctgaagtcacttcaattttcgagttgtgtaagacttgagtcattaccagaagacagcctcccttcctctcttaa |
10531845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 10666497 - 10666605
Alignment:
| Q |
359 |
cattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctct |
458 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||||| |||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10666497 |
cattaccagaagacagcctcccttcctcgctgaaatcacttgaattgtttgaatgtgaaaagcttgagtcattaccagaagacagcctccctgactctct |
10666596 |
T |
|
| Q |
459 |
taagcaact |
467 |
Q |
| |
|
|||| |||| |
|
|
| T |
10666597 |
taaggaact |
10666605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 177 - 461
Target Start/End: Original strand, 10680359 - 10680643
Alignment:
| Q |
177 |
attgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaa |
276 |
Q |
| |
|
||||||| ||| || || ||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| | ||||| |||| |
|
|
| T |
10680359 |
attgacagttggaacggttgatgatatagttaacaccgtgctgaacgagtcattgcttcccatctcccttgtgtctctatctattggtcatctctctgaa |
10680458 |
T |
|
| Q |
277 |
atgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttgagacattgccagaaaactgcc |
376 |
Q |
| |
|
|| ||||| |||| |||||||| ||||||||||||||||||||| || |||| ||| ||||| | |||||| |||| |||||||| |||| |
|
|
| T |
10680459 |
ataaagtcacttgaaggaaatggacttcgacacctctcctctctcaaaaatcttaactttcttaattgctcggagcttgagtcatttccagaaaattgcc |
10680558 |
T |
|
| Q |
377 |
tcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctcttaa |
461 |
Q |
| |
|
|||||||||||||||||| ||||||||| || | ||| || || |||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
10680559 |
tcccttcctcgctgaaatcacttcaatttttgagttgtgtaagacttgagttgttaccagaagacagcctcccttcctctcttaa |
10680643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 455
Target Start/End: Original strand, 9852832 - 9852935
Alignment:
| Q |
352 |
cttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctg |
451 |
Q |
| |
|
|||||| |||| ||||||||||||||||| || |||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9852832 |
cttgagtcattaccagaaaactgcctcccatcatcgctgaaatcacttgaattgtggaaatgtgaaaagctagagtcattaccagaagacagcctccctg |
9852931 |
T |
|
| Q |
452 |
actc |
455 |
Q |
| |
|
|||| |
|
|
| T |
9852932 |
actc |
9852935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 10531319 - 10531420
Alignment:
| Q |
55 |
gagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcc |
154 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| || | ||||||| ||| || ||||||| ||||||||||||| |
|
|
| T |
10531319 |
gagttgttattttgtgaaggaatttgtctacctcccaaattacaatcaattgtgatatctttccaaagagcaacgccgcctgtaacagaatggggtctcc |
10531418 |
T |
|
| Q |
155 |
aa |
156 |
Q |
| |
|
|| |
|
|
| T |
10531419 |
aa |
10531420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 13852873 - 13852822
Alignment:
| Q |
54 |
agagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaatt |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13852873 |
agagttgtcattttgtgaaggagtttgtctacctcctaaattacaatcaatt |
13852822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 459
Target Start/End: Original strand, 10583544 - 10583644
Alignment:
| Q |
359 |
cattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactctct |
458 |
Q |
| |
|
|||| |||||| || ||||||||||||||||||||| ||||||||| | | ||| || || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583544 |
cattaccagaagacagcctcccttcctcgctgaaatcacttcaatttgtgggttgtgtaagactcgagtcattaccagaagacagcctccctgactctct |
10583643 |
T |
|
| Q |
459 |
t |
459 |
Q |
| |
|
| |
|
|
| T |
10583644 |
t |
10583644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 346
Target Start/End: Complemental strand, 13852699 - 13852563
Alignment:
| Q |
210 |
caccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacac |
309 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| |||||||| |||| |||| |||||||||||| || |||||||||||||||||||| |
|
|
| T |
13852699 |
caccttgatgaaggagctgttgatacccatctcccttttgtctctgtttatcggcagtctctctgaaatgaagtctttcgatggaaatgggcttcgacat |
13852600 |
T |
|
| Q |
310 |
ctctcctctctccaacatctctgttttaggaattgtc |
346 |
Q |
| |
|
|||||||||||| | ||||| | ||| ||||||||| |
|
|
| T |
13852599 |
ctctcctctctcaacaatctcggattttggaattgtc |
13852563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 10680127 - 10680167
Alignment:
| Q |
65 |
tttgtgaaggagtttgtctacctcccaaattacaatcaatt |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10680127 |
tttgtgaaggagtttgtctacctcccaaattacaatcaatt |
10680167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 450
Target Start/End: Original strand, 10091937 - 10092048
Alignment:
| Q |
339 |
gaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaa |
438 |
Q |
| |
|
||||||| | || |||||| |||| ||||| ||||||||||| ||||||||||||| |||| |||| | ||||||| ||| || |||||||||||| |
|
|
| T |
10091937 |
gaattgtgaaaagcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaa |
10092036 |
T |
|
| Q |
439 |
gacagcctccct |
450 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10092037 |
gacagcctccct |
10092048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 450
Target Start/End: Original strand, 10198819 - 10198930
Alignment:
| Q |
339 |
gaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaa |
438 |
Q |
| |
|
||||||| | || |||||| |||| ||||| ||||||||||| ||||||||||||| |||| |||| | ||||||| ||| || |||||||||||| |
|
|
| T |
10198819 |
gaattgtgaaaagcttgagtcatttccagacaactgcctcccgtcctcgctgaaatcacttagattgagtgattgtaaaatgcttgattcattaccagaa |
10198918 |
T |
|
| Q |
439 |
gacagcctccct |
450 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10198919 |
gacagcctccct |
10198930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 13163782 - 13163906
Alignment:
| Q |
196 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
295 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||||||||||||| |
|
|
| T |
13163782 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
13163881 |
T |
|
| Q |
296 |
atgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
13163882 |
atggactccgacacctatcctctct |
13163906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 13173830 - 13173954
Alignment:
| Q |
196 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
295 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||| ||||||||| |
|
|
| T |
13173830 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatccattgatggaa |
13173929 |
T |
|
| Q |
296 |
atgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
13173930 |
atggactccgacacctatcctctct |
13173954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 13346909 - 13347033
Alignment:
| Q |
196 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
295 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| ||||||| | ||||| |||||| | ||||||||||||| |
|
|
| T |
13346909 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttggatatttctaatctctgtgaaatacaatcctttgatggaa |
13347008 |
T |
|
| Q |
296 |
atgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||| || ||||||| |||||||| |
|
|
| T |
13347009 |
atggactcggacacctatcctctct |
13347033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 10892194 - 10892241
Alignment:
| Q |
273 |
tgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctct |
320 |
Q |
| |
|
||||||||| | ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
10892194 |
tgaaatgaaatgcttaggtggaaatgggcttcgacacctctcctctct |
10892241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 10091812 - 10091850
Alignment:
| Q |
352 |
cttgagacattgccagaaaactgcctcccttcctcgctg |
390 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
10091812 |
cttgagtcattgccagaaaactgtctcccttcctcgctg |
10091850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 10198694 - 10198732
Alignment:
| Q |
352 |
cttgagacattgccagaaaactgcctcccttcctcgctg |
390 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
10198694 |
cttgagtcattgccagaaaactgtctcccttcctcgctg |
10198732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 10372961 - 10372927
Alignment:
| Q |
416 |
aaaagctagagtcattaccagaagacagcctccct |
450 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10372961 |
aaaagcttgagtcattaccagaagacagcctccct |
10372927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 9852775 - 9852860
Alignment:
| Q |
364 |
ccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccc |
449 |
Q |
| |
|
|||| |||||||||||| || |||||||||| |||| |||| || ||||| ||||| ||||||||||||||| || ||||||| |
|
|
| T |
9852775 |
ccagtaaactgcctcccatcatcgctgaaatcacttaaatttgttgattgtaagaagcttgagtcattaccagaaaactgcctccc |
9852860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 10085907 - 10085944
Alignment:
| Q |
49 |
tgtgcagagttgtcattttgtgaaggagtttgtctacc |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
10085907 |
tgtggagagttgtcattttgtgaaggagtttgcctacc |
10085944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 10192827 - 10192864
Alignment:
| Q |
49 |
tgtgcagagttgtcattttgtgaaggagtttgtctacc |
86 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
10192827 |
tgtggagagttgtcattttgtgaaggagtttgcctacc |
10192864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 320
Target Start/End: Complemental strand, 11128192 - 11128163
Alignment:
| Q |
291 |
tggaaatgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11128192 |
tggaaatgggcttcgacacctctcctctct |
11128163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 320
Target Start/End: Complemental strand, 11157183 - 11157154
Alignment:
| Q |
291 |
tggaaatgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11157183 |
tggaaatgggcttcgacacctctcctctct |
11157154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 463
Target Start/End: Original strand, 10503681 - 10503717
Alignment:
| Q |
427 |
tcattaccagaagacagcctccctgactctcttaagc |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
10503681 |
tcattaccagaagacagccttcctgattctcttaagc |
10503717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 56 - 467
Target Start/End: Complemental strand, 55012 - 54601
Alignment:
| Q |
56 |
agttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctcca |
155 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| || ||| |||| ||| | || ||||||||||||||||| |
|
|
| T |
55012 |
agttgtcattttctgaaggagtttgtctacctctcaaattacaatcaattgtgatttctaccaaaaaaacagcaccgccggttacggaatggggtctcca |
54913 |
T |
|
| Q |
156 |
atatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctg |
255 |
Q |
| |
|
|||||||||||| |||| || ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
54912 |
atatttgacagctcttttttttttgtgtattgtaaagggtgatgatatatttaacaccttgatgaaggagtcattgctacccatctcccttgtgcatcta |
54813 |
T |
|
| Q |
256 |
gatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaacttg |
355 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||| |||||| |
|
|
| T |
54812 |
cgtatctgtgatctctctgaaatgaagtcctttgatggaaatgggctgcgacacctctcctctctccaaagtctctgttttttgttttgtcaacaacttg |
54713 |
T |
|
| Q |
356 |
agacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgactc |
455 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||| | | ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
54712 |
agacattgccagaaaactgcctcccttcctcgctgaaatcacttgaattttatgattgtaaaaagctagagtcattaccagaagacagcctccctgaatc |
54613 |
T |
|
| Q |
456 |
tcttaagcaact |
467 |
Q |
| |
|
||||||| |||| |
|
|
| T |
54612 |
tcttaaggaact |
54601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 54 - 459
Target Start/End: Original strand, 26909545 - 26909950
Alignment:
| Q |
54 |
agagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtctc |
153 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| || |||| ||||| ||| ||||| ||||||||| ||||| |
|
|
| T |
26909545 |
agagttgtcattttgtgaaggtgtttgtctacctcccaacttacaatcaattgacctttggtctcaaataacaacaccgtctgttacggaatggtgtctc |
26909644 |
T |
|
| Q |
154 |
caatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctc |
253 |
Q |
| |
|
||| || | || | ||||| |||||| || || ||||| |||||| | ||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
26909645 |
caagatctaaccactctttcagaattgactatcaaagagggtcatgatacatttaacaccttgatgaaggagttgttgctacccatctcccttgtttctc |
26909744 |
T |
|
| Q |
254 |
tggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataaact |
353 |
Q |
| |
|
| | |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| |||||| | |||| |
|
|
| T |
26909745 |
tacaaatcatggatctctatgaaatgaagtcctttgatggaaatgggcttcgacgcctctcctctctccaaaatcttcactttattaattgtgaacaact |
26909844 |
T |
|
| Q |
354 |
tgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccctgac |
453 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||| |||||||| | | | ||| | || || |||||||||||||||||||||||||| ||| |
|
|
| T |
26909845 |
caagtcatttccagaaaactgcctcccttcctcgctgaaatatcttcaattttatggctgtgagaaacttgagtcattaccagaagacagcctccccgac |
26909944 |
T |
|
| Q |
454 |
tctctt |
459 |
Q |
| |
|
|||||| |
|
|
| T |
26909945 |
tctctt |
26909950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 53 - 321
Target Start/End: Original strand, 11487685 - 11487953
Alignment:
| Q |
53 |
cagagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaaccatctgtaacggaatggggtct |
152 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||| || ||||| ||| || |||| |||||||||||||| |
|
|
| T |
11487685 |
cagagttgtcattttgtgaagatgtttctctacctcccaaattagaatcaattgagattttgtcggaaagatcaacgccgcctgttacggaatggggtct |
11487784 |
T |
|
| Q |
153 |
ccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtct |
252 |
Q |
| |
|
| || || |||| || ||||| ||||| |||| | ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11487785 |
caaagatctgaccgctctttcacggttgactattggagtgggtgatgatatacttaacaccttgatgaagcagtcgttgctacccatctcccttgtgtct |
11487884 |
T |
|
| Q |
253 |
ctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctc |
321 |
Q |
| |
|
||| |||| || || | | |||||||| ||| |||||||| |||||||||| |||||||||||||| |
|
|
| T |
11487885 |
ctgactatcgattgtcgctacaaaatgaagccctatgatggaagtgggcttcgatacctctcctctctc |
11487953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 230 - 475
Target Start/End: Complemental strand, 44954896 - 44954651
Alignment:
| Q |
230 |
tgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacct-ctcctctctccaacatc |
328 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||| | ||||||||||||| |||||| |||||||||| || ||| |
|
|
| T |
44954896 |
tgctacccatctcccttgtgtctctgactatcagttatctggatgaaatgaagtcctttcaaggaaatgggcttcaacacctactcctctctcgaaaatc |
44954797 |
T |
|
| Q |
329 |
tctgttttaggaattgtcataaacttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtc |
428 |
Q |
| |
|
|| ||| | || ||||| | |||||| |||| ||||||||||| || |||||||||||||||| ||||||||| || ||| || | || ||||| |
|
|
| T |
44954796 |
tccactttcgtaactgtcaacagcttgagtcatttccagaaaactgtcttccttcctcgctgaaatcacttcaatttttgttttgtgaaga-cttgagtc |
44954698 |
T |
|
| Q |
429 |
attaccagaagacagcctccctgactctcttaagcaactagtcattt |
475 |
Q |
| |
|
||||||||||| |||||||| |||||||||| | ||| ||||||| |
|
|
| T |
44954697 |
gttaccagaagaaagcctccccaactctcttaatcgactggtcattt |
44954651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 44955066 - 44955024
Alignment:
| Q |
59 |
tgtcattttgtgaaggagtttgtctacctcccaaattacaatc |
101 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
44955066 |
tgtcattttgtgaaggtgtttgcctacctcccaaattacaatc |
44955024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 54 - 475
Target Start/End: Complemental strand, 17850338 - 17849914
Alignment:
| Q |
54 |
agagttgtcattttgtgaaggagtttgtctacctcccaaattacaatcaattacgatttcatcccaaagaacaaaa---ccatctgtaacggaatggggt |
150 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||| |||| |||||||| | || ||||||| ||||||||| |
|
|
| T |
17850338 |
agagttgtcattttgtggaggagtttccctacctcccaagttacaatcaattgatattcattcccgaagaacaacagccccgcctgtaacagaatggggt |
17850239 |
T |
|
| Q |
151 |
ctccaatatttgacagcactttccttattgacaattgaaaagggtgatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgt |
250 |
Q |
| |
|
|||||| | || || ||||| | ||||| ||| ||||| |||||||||||| |||||||||||||||||||| ||||| || || ||||| |||| |
|
|
| T |
17850238 |
ctccaaggcctaactgctctttcatcattgagtcttggaaaggatgatgatatagtgaacaccttgatgaaggagtcgttgctcccaatatccctcgtgt |
17850139 |
T |
|
| Q |
251 |
ctctggatatcaatgatctcaatgaaatgaagtcctttgatggaaatgggcttcgacacctctcctctctccaacatctctgttttaggaattgtcataa |
350 |
Q |
| |
|
||||| |||| | ||||| || | |||| ||||||||||||||||| |||||||| || |||||||| || ||| ||| || ||||| | |
|
|
| T |
17850138 |
ctctgactatctgtcatctctataatctgaactcctttgatggaaatggacttcgacatctttcctctcttgaaagtcttgactttcttaactgtcaaca |
17850039 |
T |
|
| Q |
351 |
acttgagacattgccagaaaactgcctcccttcctcgctgaaattacttcaattgtttcgatgtaaaaagctagagtcattaccagaagacagcctccct |
450 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||| ||||||| ||| |||| | | ||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
17850038 |
acttgagtcattgccacaaaactgcctcccttcctcactgaaatcgcttgaattttgttattgtaaaagacttgagtcgttaccagaagacagcctccct |
17849939 |
T |
|
| Q |
451 |
gactctcttaagcaactagtcattt |
475 |
Q |
| |
|
||||||||||| ||| ||||||| |
|
|
| T |
17849938 |
tcctctcttaagcgactggtcattt |
17849914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 143206 - 143082
Alignment:
| Q |
196 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
295 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||||||||||||| |
|
|
| T |
143206 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatcctttgatggaa |
143107 |
T |
|
| Q |
296 |
atgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
143106 |
atggactccgacacctatcctctct |
143082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 133158 - 133034
Alignment:
| Q |
196 |
gatgatatagttaacaccttgatgaaggagtcattgctacccatctcccttgtgtctctggatatcaatgatctcaatgaaatgaagtcctttgatggaa |
295 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||||| || || || ||||||||| || |||| | ||||| |||||| || ||| ||||||||| |
|
|
| T |
133158 |
gatgatattgttaacaccttgctgaaggagcggttgctgccaatttcacttgtgtctttgtatatttctaatctctgtgaaataaaatccattgatggaa |
133059 |
T |
|
| Q |
296 |
atgggcttcgacacctctcctctct |
320 |
Q |
| |
|
|||| || |||||||| |||||||| |
|
|
| T |
133058 |
atggactccgacacctatcctctct |
133034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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