View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1713_low_13 (Length: 208)

Name: NF1713_low_13
Description: NF1713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1713_low_13
NF1713_low_13
[»] chr7 (43 HSPs)
chr7 (77-204)||(60400-60527)
chr7 (77-200)||(14337629-14337752)
chr7 (77-200)||(14331045-14331168)
chr7 (77-204)||(18164397-18164524)
chr7 (77-204)||(40523085-40523212)
chr7 (77-204)||(9510736-9510863)
chr7 (77-204)||(21937-22064)
chr7 (77-204)||(8201798-8201925)
chr7 (77-204)||(15155893-15156020)
chr7 (77-204)||(16407018-16407145)
chr7 (77-204)||(13684717-13684844)
chr7 (77-204)||(13691332-13691459)
chr7 (77-204)||(15162544-15162671)
chr7 (77-204)||(15022384-15022512)
chr7 (77-204)||(14655140-14655267)
chr7 (77-204)||(18176359-18176486)
chr7 (77-204)||(18183031-18183158)
chr7 (77-146)||(12703111-12703180)
chr7 (77-204)||(11366455-11366582)
chr7 (77-172)||(44786198-44786293)
chr7 (77-172)||(44792839-44792934)
chr7 (77-204)||(20702715-20702842)
chr7 (77-204)||(32767929-32768056)
chr7 (77-142)||(1347824-1347889)
chr7 (77-142)||(11232008-11232073)
chr7 (77-142)||(11238695-11238760)
chr7 (77-174)||(33392-33489)
chr7 (77-145)||(12704382-12704450)
chr7 (105-204)||(49051625-49051724)
chr7 (77-174)||(70489-70586)
chr7 (91-143)||(4318283-4318335)
chr7 (128-204)||(12703184-12703260)
chr7 (91-204)||(18585038-18585151)
chr7 (93-145)||(9410258-9410310)
chr7 (91-143)||(14148885-14148937)
chr7 (77-174)||(74597-74695)
chr7 (91-204)||(8706250-8706363)
chr7 (91-204)||(8719666-8719779)
chr7 (91-145)||(18531558-18531612)
chr7 (91-204)||(23519692-23519805)
chr7 (99-204)||(18553278-18553383)
chr7 (91-142)||(10869764-10869815)
chr7 (91-142)||(10875844-10875895)
[»] chr6 (52 HSPs)
chr6 (77-204)||(2869859-2869986)
chr6 (77-204)||(2876474-2876601)
chr6 (77-204)||(4233222-4233349)
chr6 (77-204)||(6980914-6981041)
chr6 (77-204)||(20649517-20649644)
chr6 (77-204)||(8229143-8229270)
chr6 (77-204)||(14059340-14059467)
chr6 (77-204)||(18931332-18931459)
chr6 (77-204)||(20060905-20061032)
chr6 (77-204)||(29587403-29587530)
chr6 (77-204)||(29593544-29593671)
chr6 (79-204)||(12762957-12763082)
chr6 (77-204)||(30597473-30597600)
chr6 (77-204)||(27327780-27327907)
chr6 (77-204)||(27388520-27388647)
chr6 (77-204)||(30637854-30637980)
chr6 (77-204)||(18194248-18194375)
chr6 (91-204)||(8797446-8797559)
chr6 (77-204)||(30694618-30694745)
chr6 (91-204)||(17031126-17031239)
chr6 (91-204)||(27430021-27430134)
chr6 (77-200)||(1538668-1538791)
chr6 (77-200)||(1544767-1544890)
chr6 (91-204)||(20802012-20802124)
chr6 (77-142)||(26130786-26130851)
chr6 (91-204)||(28258192-28258304)
chr6 (91-204)||(28264816-28264928)
chr6 (91-204)||(28336941-28337053)
chr6 (91-204)||(28343565-28343677)
chr6 (91-204)||(28314827-28314940)
chr6 (93-145)||(3708222-3708274)
chr6 (93-145)||(14098941-14098993)
chr6 (91-143)||(16372175-16372227)
chr6 (93-145)||(34832969-34833021)
chr6 (121-204)||(28287612-28287694)
chr6 (91-204)||(17037073-17037186)
chr6 (91-204)||(27185965-27186078)
chr6 (91-204)||(27207801-27207914)
chr6 (91-204)||(27241314-27241427)
chr6 (91-204)||(27263162-27263275)
chr6 (91-143)||(22331756-22331808)
chr6 (93-145)||(25595092-25595144)
chr6 (91-204)||(32564980-32565093)
chr6 (93-141)||(31316832-31316880)
chr6 (91-204)||(17016660-17016773)
chr6 (91-204)||(34369711-34369824)
chr6 (93-145)||(4168239-4168291)
chr6 (93-145)||(4208919-4208971)
chr6 (91-143)||(19808843-19808895)
chr6 (93-141)||(24314819-24314867)
chr6 (93-145)||(25111155-25111207)
chr6 (93-145)||(25117758-25117810)
[»] chr5 (58 HSPs)
chr5 (77-204)||(27608994-27609121)
chr5 (77-204)||(22265200-22265327)
chr5 (77-204)||(27615600-27615727)
chr5 (77-204)||(27663513-27663640)
chr5 (77-204)||(27670153-27670280)
chr5 (78-204)||(41097947-41098073)
chr5 (78-204)||(41769497-41769623)
chr5 (77-204)||(17706654-17706781)
chr5 (78-204)||(41776071-41776197)
chr5 (77-204)||(14994759-14994886)
chr5 (77-204)||(22062605-22062732)
chr5 (77-204)||(23610157-23610284)
chr5 (77-204)||(23841553-23841680)
chr5 (77-204)||(15001402-15001529)
chr5 (77-204)||(23584395-23584522)
chr5 (77-204)||(24471971-24472098)
chr5 (77-204)||(25107039-25107166)
chr5 (77-204)||(25166132-25166259)
chr5 (79-204)||(34294278-34294403)
chr5 (77-204)||(1692160-1692287)
chr5 (77-204)||(16355100-16355227)
chr5 (77-204)||(16361759-16361886)
chr5 (77-204)||(18038391-18038518)
chr5 (77-204)||(34565093-34565220)
chr5 (77-204)||(34571748-34571875)
chr5 (77-204)||(27687052-27687179)
chr5 (77-204)||(19992138-19992265)
chr5 (77-204)||(25406680-25406807)
chr5 (77-204)||(37286504-37286631)
chr5 (77-204)||(37293207-37293334)
chr5 (77-172)||(40707408-40707503)
chr5 (77-172)||(40714050-40714145)
chr5 (77-202)||(22327887-22328012)
chr5 (77-202)||(22334541-22334666)
chr5 (77-204)||(22133253-22133380)
chr5 (77-204)||(22139945-22140072)
chr5 (77-204)||(41294158-41294285)
chr5 (91-204)||(37544296-37544410)
chr5 (91-204)||(33726114-33726227)
chr5 (77-204)||(22588349-22588476)
chr5 (77-172)||(27517039-27517133)
chr5 (77-172)||(27523676-27523770)
chr5 (77-204)||(17284321-17284448)
chr5 (77-204)||(29477678-29477805)
chr5 (77-204)||(29471083-29471210)
chr5 (77-174)||(15236504-15236601)
chr5 (91-204)||(20776143-20776256)
chr5 (91-143)||(23337026-23337078)
chr5 (91-204)||(21667544-21667657)
chr5 (91-204)||(29316673-29316786)
chr5 (93-141)||(19768666-19768714)
chr5 (93-141)||(19775262-19775310)
chr5 (93-141)||(23250258-23250306)
chr5 (91-145)||(22410336-22410390)
chr5 (91-143)||(14359557-14359609)
chr5 (91-142)||(22258211-22258262)
chr5 (93-133)||(24020586-24020626)
chr5 (93-141)||(25808226-25808274)
[»] chr4 (50 HSPs)
chr4 (77-200)||(8048220-8048343)
chr4 (77-200)||(8054833-8054956)
chr4 (77-204)||(19780014-19780141)
chr4 (77-204)||(4772351-4772478)
chr4 (77-204)||(17962049-17962176)
chr4 (77-204)||(22194874-22195001)
chr4 (77-204)||(36884459-36884586)
chr4 (77-204)||(15148710-15148837)
chr4 (77-204)||(15383218-15383345)
chr4 (77-204)||(23954402-23954529)
chr4 (77-204)||(23961064-23961191)
chr4 (79-204)||(18024154-18024279)
chr4 (77-204)||(8385089-8385216)
chr4 (77-204)||(8391744-8391871)
chr4 (77-204)||(12475274-12475401)
chr4 (77-204)||(12481904-12482031)
chr4 (77-204)||(14074085-14074212)
chr4 (77-204)||(15256863-15256990)
chr4 (77-204)||(15362387-15362514)
chr4 (77-204)||(16231566-16231693)
chr4 (77-204)||(17808668-17808795)
chr4 (77-204)||(20115397-20115524)
chr4 (77-204)||(17089702-17089829)
chr4 (77-204)||(29040623-29040750)
chr4 (77-204)||(14268182-14268309)
chr4 (77-204)||(7900895-7901022)
chr4 (77-204)||(15321818-15321945)
chr4 (77-172)||(18295912-18296007)
chr4 (77-204)||(51493542-51493669)
chr4 (91-204)||(18071423-18071536)
chr4 (77-204)||(6873100-6873227)
chr4 (77-204)||(14298552-14298679)
chr4 (77-204)||(26284632-26284759)
chr4 (77-204)||(40478402-40478529)
chr4 (77-204)||(14305176-14305303)
chr4 (77-204)||(40471729-40471856)
chr4 (77-174)||(17810557-17810654)
chr4 (91-175)||(9271842-9271926)
chr4 (77-145)||(14757146-14757214)
chr4 (93-145)||(30234918-30234970)
chr4 (77-114)||(17991393-17991430)
chr4 (91-143)||(35170944-35170996)
chr4 (91-204)||(12349312-12349425)
chr4 (77-133)||(386078-386134)
chr4 (93-141)||(16956390-16956438)
chr4 (91-142)||(55795774-55795825)
chr4 (91-204)||(12299636-12299749)
chr4 (93-141)||(19941894-19941942)
chr4 (93-141)||(23081906-23081954)
chr4 (93-141)||(27710063-27710111)
[»] scaffold0044 (3 HSPs)
scaffold0044 (77-204)||(30782-30909)
scaffold0044 (77-204)||(72622-72749)
scaffold0044 (77-204)||(8314-8441)
[»] chr8 (23 HSPs)
chr8 (77-204)||(17669294-17669421)
chr8 (77-204)||(17675946-17676073)
chr8 (77-200)||(20019664-20019787)
chr8 (77-204)||(5534163-5534290)
chr8 (77-204)||(21915294-21915421)
chr8 (77-204)||(22084086-22084213)
chr8 (77-200)||(20013588-20013710)
chr8 (77-204)||(28455014-28455141)
chr8 (77-204)||(22123109-22123236)
chr8 (77-204)||(8354487-8354614)
chr8 (77-172)||(19111513-19111608)
chr8 (77-172)||(19117804-19117899)
chr8 (77-204)||(16882896-16883023)
chr8 (77-204)||(18855191-18855318)
chr8 (77-204)||(18865586-18865713)
chr8 (91-204)||(19496645-19496758)
chr8 (77-142)||(22115444-22115509)
chr8 (77-204)||(29123340-29123467)
chr8 (91-204)||(22048201-22048314)
chr8 (77-126)||(22122146-22122195)
chr8 (91-143)||(19905812-19905864)
chr8 (91-142)||(18065648-18065699)
chr8 (93-138)||(20023668-20023713)
[»] chr3 (70 HSPs)
chr3 (77-204)||(10846007-10846133)
chr3 (77-204)||(26788528-26788655)
chr3 (77-204)||(26794118-26794245)
chr3 (77-204)||(37615647-37615774)
chr3 (77-204)||(26889711-26889838)
chr3 (77-204)||(6598974-6599101)
chr3 (77-204)||(6605654-6605781)
chr3 (77-204)||(10153458-10153585)
chr3 (77-204)||(16623778-16623905)
chr3 (79-204)||(14672925-14673050)
chr3 (77-204)||(418256-418383)
chr3 (77-204)||(31422276-31422403)
chr3 (77-204)||(5106607-5106734)
chr3 (77-204)||(16489393-16489520)
chr3 (77-204)||(16634107-16634234)
chr3 (77-204)||(16640717-16640844)
chr3 (77-204)||(43161382-43161509)
chr3 (77-204)||(43167619-43167746)
chr3 (77-204)||(48423624-48423751)
chr3 (77-204)||(48430402-48430529)
chr3 (77-204)||(1332784-1332910)
chr3 (77-204)||(53380075-53380201)
chr3 (77-204)||(53386727-53386853)
chr3 (77-204)||(16747562-16747689)
chr3 (77-204)||(16758294-16758421)
chr3 (81-204)||(5149695-5149818)
chr3 (77-204)||(5221660-5221787)
chr3 (77-172)||(13251007-13251102)
chr3 (77-172)||(13257653-13257748)
chr3 (91-204)||(3690875-3690988)
chr3 (91-204)||(10904483-10904596)
chr3 (91-204)||(10911155-10911268)
chr3 (77-204)||(41201521-41201648)
chr3 (91-204)||(10003893-10004006)
chr3 (91-204)||(10010540-10010653)
chr3 (91-204)||(20057140-20057253)
chr3 (91-204)||(20063778-20063891)
chr3 (77-204)||(23704492-23704619)
chr3 (77-204)||(23722948-23723075)
chr3 (77-204)||(23741404-23741531)
chr3 (77-142)||(41092070-41092135)
chr3 (80-204)||(15726658-15726782)
chr3 (77-174)||(30066234-30066331)
chr3 (77-145)||(14499642-14499710)
chr3 (77-174)||(11070356-11070453)
chr3 (77-174)||(11165253-11165350)
chr3 (77-145)||(15692001-15692069)
chr3 (93-145)||(15825978-15826030)
chr3 (93-145)||(19809343-19809395)
chr3 (95-142)||(4710616-4710663)
chr3 (91-200)||(6608739-6608848)
chr3 (93-145)||(10236133-10236185)
chr3 (93-145)||(15991843-15991895)
chr3 (93-145)||(17710331-17710383)
chr3 (93-144)||(13315927-13315978)
chr3 (91-204)||(12482684-12482797)
chr3 (93-141)||(1145291-1145339)
chr3 (93-141)||(15349988-15350036)
chr3 (91-142)||(5201541-5201592)
chr3 (91-145)||(15584457-15584511)
chr3 (91-145)||(15591115-15591169)
chr3 (96-141)||(410493-410538)
chr3 (93-138)||(8720895-8720940)
chr3 (93-138)||(9072782-9072827)
chr3 (97-141)||(4291090-4291134)
chr3 (91-142)||(5420042-5420093)
chr3 (91-142)||(5426440-5426491)
chr3 (93-141)||(15343345-15343393)
chr3 (77-133)||(22643062-22643118)
chr3 (77-133)||(55023174-55023230)
[»] chr2 (40 HSPs)
chr2 (77-204)||(22320710-22320837)
chr2 (77-204)||(22326863-22326990)
chr2 (77-204)||(26877292-26877419)
chr2 (77-204)||(27216321-27216448)
chr2 (77-204)||(13306313-13306440)
chr2 (77-204)||(16986199-16986326)
chr2 (77-204)||(28431636-28431763)
chr2 (79-200)||(19489650-19489771)
chr2 (77-204)||(9340538-9340665)
chr2 (77-204)||(9489172-9489299)
chr2 (77-204)||(9608433-9608560)
chr2 (77-204)||(24913688-24913815)
chr2 (84-204)||(16922787-16922907)
chr2 (77-204)||(23171293-23171420)
chr2 (77-204)||(23582550-23582677)
chr2 (77-204)||(27617551-27617678)
chr2 (77-204)||(29233784-29233911)
chr2 (77-204)||(29347083-29347210)
chr2 (77-204)||(12829325-12829452)
chr2 (77-204)||(27599519-27599646)
chr2 (77-204)||(1843338-1843465)
chr2 (77-172)||(16997337-16997432)
chr2 (77-172)||(17003970-17004065)
chr2 (85-172)||(16928643-16928730)
chr2 (91-204)||(10866627-10866740)
chr2 (91-204)||(10873794-10873907)
chr2 (77-174)||(10101369-10101466)
chr2 (93-145)||(37318589-37318641)
chr2 (93-141)||(13970109-13970157)
chr2 (93-141)||(24715030-24715078)
chr2 (91-143)||(27197201-27197253)
chr2 (93-141)||(41604471-41604519)
chr2 (93-141)||(41610368-41610416)
chr2 (93-141)||(45057165-45057213)
chr2 (91-142)||(27369619-27369670)
chr2 (91-142)||(27376129-27376180)
chr2 (92-145)||(24872146-24872199)
chr2 (92-145)||(24880031-24880084)
chr2 (91-142)||(44380931-44380982)
chr2 (91-142)||(44387601-44387652)
[»] scaffold0155 (1 HSPs)
scaffold0155 (77-204)||(9540-9667)
[»] scaffold0052 (3 HSPs)
scaffold0052 (77-204)||(10614-10741)
scaffold0052 (77-204)||(57036-57163)
scaffold0052 (77-204)||(776-903)
[»] chr1 (30 HSPs)
chr1 (77-204)||(20215652-20215779)
chr1 (77-204)||(46157044-46157171)
chr1 (79-204)||(44844608-44844734)
chr1 (77-204)||(43078695-43078822)
chr1 (77-204)||(18599829-18599956)
chr1 (77-204)||(41478300-41478428)
chr1 (77-204)||(21828969-21829096)
chr1 (77-172)||(51328402-51328497)
chr1 (77-172)||(51335036-51335131)
chr1 (91-204)||(16345512-16345625)
chr1 (91-204)||(16352160-16352273)
chr1 (91-204)||(41356025-41356138)
chr1 (77-204)||(21844482-21844609)
chr1 (91-204)||(41348588-41348701)
chr1 (91-204)||(47659472-47659585)
chr1 (77-174)||(1011008-1011105)
chr1 (91-143)||(19063836-19063888)
chr1 (91-143)||(19105069-19105121)
chr1 (91-143)||(19111726-19111778)
chr1 (91-204)||(27898397-27898510)
chr1 (91-204)||(43063014-43063127)
chr1 (91-204)||(44756360-44756473)
chr1 (91-204)||(49334827-49334940)
chr1 (93-141)||(21806940-21806988)
chr1 (93-141)||(33385963-33386011)
chr1 (93-141)||(33392607-33392655)
chr1 (92-145)||(8305450-8305503)
chr1 (91-204)||(33394102-33394215)
chr1 (91-142)||(18626013-18626064)
chr1 (99-143)||(20524961-20525005)
[»] scaffold0061 (1 HSPs)
scaffold0061 (80-204)||(59187-59311)
[»] scaffold0017 (1 HSPs)
scaffold0017 (80-204)||(139322-139446)
[»] scaffold0032 (1 HSPs)
scaffold0032 (77-204)||(109048-109175)
[»] scaffold0028 (4 HSPs)
scaffold0028 (77-204)||(67763-67890)
scaffold0028 (77-204)||(41792-41919)
scaffold0028 (77-204)||(57299-57426)
scaffold0028 (93-145)||(7318-7370)
[»] scaffold0140 (1 HSPs)
scaffold0140 (77-204)||(38959-39086)
[»] scaffold0003 (1 HSPs)
scaffold0003 (91-204)||(57229-57342)
[»] scaffold0109 (1 HSPs)
scaffold0109 (77-204)||(26897-27024)
[»] scaffold0029 (2 HSPs)
scaffold0029 (77-204)||(125837-125964)
scaffold0029 (77-204)||(105602-105729)
[»] scaffold0141 (1 HSPs)
scaffold0141 (91-204)||(38297-38410)
[»] scaffold0049 (1 HSPs)
scaffold0049 (91-204)||(76402-76515)
[»] scaffold0005 (1 HSPs)
scaffold0005 (77-204)||(307351-307478)
[»] scaffold0180 (1 HSPs)
scaffold0180 (91-145)||(3023-3077)
[»] scaffold0144 (1 HSPs)
scaffold0144 (91-204)||(32050-32162)
[»] scaffold0525 (1 HSPs)
scaffold0525 (77-174)||(3600-3697)
[»] scaffold0431 (1 HSPs)
scaffold0431 (93-145)||(12758-12810)
[»] scaffold0349 (1 HSPs)
scaffold0349 (77-145)||(12736-12804)
[»] scaffold0156 (1 HSPs)
scaffold0156 (93-145)||(3086-3138)
[»] scaffold0004 (1 HSPs)
scaffold0004 (93-145)||(78528-78580)
[»] scaffold0553 (1 HSPs)
scaffold0553 (91-204)||(9044-9157)
[»] scaffold0126 (1 HSPs)
scaffold0126 (91-204)||(3816-3929)
[»] scaffold0216 (1 HSPs)
scaffold0216 (77-145)||(8601-8669)
[»] scaffold0009 (1 HSPs)
scaffold0009 (93-141)||(74314-74362)
[»] scaffold0133 (1 HSPs)
scaffold0133 (91-204)||(22459-22572)


Alignment Details
Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 60400 - 60527
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  60400 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 60499  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  60500 acttgtttgtgtgtttgtgcgatctgtg 60527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 14337752 - 14337629
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  14337752 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 14337653  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||||||||||||||    
T  14337652 acttgtttgtgtgtttgtgcgatc 14337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 14331168 - 14331045
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| ||||||||| || ||||    
T  14331168 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaactaggatga 14331069  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||||||||||||||    
T  14331068 acttgtttgtgtgtttgtgcgatc 14331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 18164397 - 18164524
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  18164397 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 18164496  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  18164497 acttgtttatgtgtttatgcgatctgtg 18164524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 40523085 - 40523212
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  40523085 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 40523184  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  40523185 acttgtttatgtgtttatgcgatctgtg 40523212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 9510736 - 9510863
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  9510736 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9510835  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
     ||||||| ||||||| |||||||||||    
T  9510836 gcttgtttatgtgtttatgcgatctgtg 9510863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22064 - 21937
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  22064 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 21965  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  21964 acttgattatgtgtttgtgcgatctgtg 21937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 8201798 - 8201925
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8201798 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8201897  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  8201898 acttgattatgtgtttgtgcgatctgtg 8201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 15155893 - 15156020
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  15155893 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 15155992  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  15155993 acttgcttgagtgtttgtgcgatctgtg 15156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16407018 - 16407145
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  16407018 tgtaggatcagagggaacccagaacaacgttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 16407117  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  16407118 acttgcttgagtgtttgtgcgatctgtg 16407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 13684844 - 13684717
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  13684844 tgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 13684745  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  13684744 acttgcttgagtgtttgtgcgatctgtg 13684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 13691459 - 13691332
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  13691459 tgtaggatcagagggaacccataacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 13691360  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  13691359 acttgcttgagtgtttgtgcgatctgtg 13691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 15162544 - 15162671
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  15162544 tgtaggatcagagggaacccaggacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 15162643  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  15162644 acttgcttgagtgtttgtgcgatctgtg 15162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 15022512 - 15022384
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  15022512 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15022413  T
Q  177 acttgtttgtgtg-tttgtgcgatctgtg 204  Q
    ||||| || |||| |||||||||||||||    
T  15022412 acttgattatgtgttttgtgcgatctgtg 15022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14655140 - 14655267
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| | | |||| |||     
T  14655140 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgagcatagccaggatgt 14655239  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  14655240 agttgcttgagtgtttgtgcgatctgtg 14655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 18176486 - 18176359
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| ||| ||| |||| |||     
T  18176486 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18176387  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  18176386 agttgcttgtgagtttgtgcgatctgtg 18176359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 18183158 - 18183031
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| ||| ||| |||| |||     
T  18183158 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18183059  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  18183058 agttgcttgtgagtttgtgcgatctgtg 18183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 12703111 - 12703180
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12703111 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagt 12703180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 11366582 - 11366455
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| ||||||||||||||||||||||  |||  |||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| ||||    
T  11366582 tgtaagatcagagggaacccagaacaagtttatgttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatga 11366483  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| |||||||||||||||||||    
T  11366482 agttgtttatgtgtttgtgcgatctgtg 11366455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 44786198 - 44786293
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  44786198 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 44786293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 44792839 - 44792934
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  44792839 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 44792934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 20702715 - 20702842
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  20702715 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 20702814  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  20702815 agatgcttgagtgtttgtgcgatctgtg 20702842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 32768056 - 32767929
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  32768056 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 32767957  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  32767956 agatgcttgagtgtttgtgcgatctgtg 32767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 1347889 - 1347824
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  1347889 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 1347824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 11232008 - 11232073
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  11232008 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 11232073  T

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Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 11238695 - 11238760
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  11238695 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagt 11238760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 33489 - 33392
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  33489 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 33392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 12704382 - 12704450
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  12704382 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 12704450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 204
Target Start/End: Complemental strand, 49051724 - 49051625
Alignment:
Q  105 cttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||  |||||||||||||||| | ||   || ||||||||||||||||||    
T  49051724 cttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcacgagtacaaccagaatgtagtttcctgagtgtttgtgcgatctgtg 49051625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 70489 - 70586
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  |||||||||||||   ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  70489 tgtaggatcagattgaacccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 70586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 4318283 - 4318335
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  4318283 gaacccagaacaacactagtttgggaattgactggtactcgccatggcgagta 4318335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 12703184 - 12703260
Alignment:
Q  128 ctcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||| || |||| ||| |||||||||||| | || ||||||| ||||||| |||||||||||    
T  12703184 ctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggaagagcttgtttatgtgtttatgcgatctgtg 12703260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 18585038 - 18585151
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| | ||||||| |||     
T  18585038 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagttgtttgagtgg 18585137  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  18585138 ttgtgcgatctgtg 18585151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 9410310 - 9410258
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||||||||    
T  9410310 acccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 9410258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 14148937 - 14148885
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  14148937 gaacctagaacaacattagtttggaaattgactggtactcgccatggcgagta 14148885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 74597 - 74695
Alignment:
Q  77 tgtaggatcagagggaaccc-agaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  |||||| |||||||   ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  74597 tgtaggatcagattgaaccccagaacaatactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 74695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 8706363 - 8706250
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  8706363 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 8706264  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  8706263 ttgtgcgatctgtg 8706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 8719779 - 8719666
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  8719779 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 8719680  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  8719679 ttgtgcgatctgtg 8719666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 18531612 - 18531558
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||||| ||||||||  | |||| | |||||||||||||||||||||    
T  18531612 gaacccagaacaacattagtttgaaacttgacttgtactcgccatggcgagtaag 18531558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 23519692 - 23519805
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 189  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||    
T  23519692 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgaggactctcgcctcgcgagcaagtccagaatgtagctgtttgagtg 23519790  T
Q  190 tttgtgcgatctgtg 204  Q
     ||||||||||||||    
T  23519791 gttgtgcgatctgtg 23519805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 18553278 - 18553383
Alignment:
Q  99 aacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcga 198  Q
    |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| ||| ||||||||    
T  18553278 aacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtggttgtgcga 18553377  T
Q  199 tctgtg 204  Q
    ||||||    
T  18553378 tctgtg 18553383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 10869815 - 10869764
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  10869815 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 10869764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 10875895 - 10875844
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  10875895 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 10875844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 2869859 - 2869986
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||||||||    
T  2869859 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 2869958  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| |||||||||||||||||||    
T  2869959 acttgtttatgtgtttgtgcgatctgtg 2869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 2876474 - 2876601
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||||||||    
T  2876474 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 2876573  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| |||||||||||||||||||    
T  2876574 acttgtttatgtgtttgtgcgatctgtg 2876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 4233222 - 4233349
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| || |||| ||| |||||||||||||||||    
T  4233222 tgtaggatcagagggaacccagaacaaccttattttgggagttgagtggtactcgtcatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 4233321  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  4233322 acttgtttgtgtgtttgtgcgatctgtg 4233349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 6981041 - 6980914
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  6981041 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6980942  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  6980941 acttgtttatgtgtttatgcgatctgtg 6980914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 20649517 - 20649644
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  20649517 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 20649616  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| ||||||| |||||||||||    
T  20649617 atttgtttatgtgtttatgcgatctgtg 20649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 8229270 - 8229143
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8229270 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggttctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8229171  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  8229170 acttgattatgtgtttgtgcgatctgtg 8229143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14059340 - 14059467
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||  || |||| ||| |||||||||||||||||    
T  14059340 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 14059439  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
      |||||| |||||||||||||||||||    
T  14059440 gattgtttatgtgtttgtgcgatctgtg 14059467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 18931459 - 18931332
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  18931459 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 18931360  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  18931359 acttgattatgtgtttgtgcgatctgtg 18931332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 20061032 - 20060905
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||| ||| |||| ||| |||||||||||| ||||    
T  20061032 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtgctcgccaaggcgagtaagagctctcgcctcgcgagtacaaccaggatga 20060933  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  20060932 acttgattatgtgtttgtgcgatctgtg 20060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 29587403 - 29587530
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  29587403 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29587502  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  29587503 acttgattatgtgtttgtgcgatctgtg 29587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 29593544 - 29593671
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  29593544 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29593643  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  29593644 acttgattatgtgtttgtgcgatctgtg 29593671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 12763082 - 12762957
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaac 178  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| || |||| ||  |||||||||||| ||||||    
T  12763082 taggatcagagggaacccagaacaagcttagtttgggagttgagaggtactcgccatggcgagtaagtactctcgcctcacgagtacaaccaggatgaac 12762983  T
Q  179 ttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||| ||||||| |||||||||||    
T  12762982 ttgtttatgtgtttatgcgatctgtg 12762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 30597600 - 30597473
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||  |||     
T  30597600 tgtaggatcagaaggaacccagaacaaccttggtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccaatatgg 30597501  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| |||||||||||||||||||    
T  30597500 aattgtttatgtgtttgtgcgatctgtg 30597473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 27327780 - 27327907
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| |||| |||||||     
T  27327780 tgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaatcagaatgt 27327879  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  27327880 agttgcttgagtgtttgtgcgatctgtg 27327907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 27388520 - 27388647
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| |||| |||||||     
T  27388520 tgtaggatcagagggaacccagaacaagattagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaatcagaatgt 27388619  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  27388620 agttgcttgagtgtttgtgcgatctgtg 27388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 30637854 - 30637980
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||| | || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  30637854 tgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 30637952  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||  | |||||||||||||||||||    
T  30637953 acttgagtatgtgtttgtgcgatctgtg 30637980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 18194248 - 18194375
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| ||| ||| |||| |||     
T  18194248 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 18194347  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  18194348 agttgcttgtgagtttgtgcgatctgtg 18194375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 8797559 - 8797446
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||| ||||||||||||||| ||    
T  8797559 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgtttgtgcgt 8797460  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  8797459 ttgtgcgatctgtg 8797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 30694745 - 30694618
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| |||||  ||| ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| |||     
T  30694745 tgtaggatcagagggaacccaaaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 30694646  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||||||||||||||||    
T  30694645 agttgcttgtgtgtttgtgcgatctgtg 30694618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 17031239 - 17031126
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  || |||| ||| ||| |||| ||||||| | ||| ||| ||||    
T  17031239 gaacccaaaacaacattagtttgggaattgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaacagaatgtagttgcttgagtgt 17031140  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  17031139 ttgtgcgatctgtg 17031126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 27430021 - 27430134
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  27430021 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 27430120  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  27430121 ttgtgcgatctgtg 27430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 1538668 - 1538791
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  1538668 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 1538767  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    | ||  ||| ||||||||||||||    
T  1538768 agtttcttgagtgtttgtgcgatc 1538791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 1544767 - 1544890
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  1544767 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 1544866  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    | ||  ||| ||||||||||||||    
T  1544867 agtttcttgagtgtttgtgcgatc 1544890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 20802124 - 20802012
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  20802124 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 20802026  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  20802025 ttgtgcgatctgtg 20802012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 26130851 - 26130786
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  26130851 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 26130786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 28258192 - 28258304
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  28258192 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 28258290  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  28258291 ttgtgcgatctgtg 28258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 28264816 - 28264928
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  28264816 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 28264914  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  28264915 ttgtgcgatctgtg 28264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 28336941 - 28337053
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  28336941 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 28337039  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  28337040 ttgtgcgatctgtg 28337053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 28343565 - 28343677
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  28343565 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg- 28343663  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  28343664 ttgtgcgatctgtg 28343677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 28314940 - 28314827
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  28314940 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 28314841  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  28314840 ttgtgcgatctgtg 28314827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 3708222 - 3708274
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  3708222 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 3708274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 14098993 - 14098941
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  14098993 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 14098941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 16372227 - 16372175
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  16372227 gaacccagaacaacattagtttggaaattgactggtactcgccatggcgagta 16372175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 34833021 - 34832969
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  34833021 acccagaacaactttagtttgggaattgtgtggtactcgctatggcgagtaag 34832969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 28287694 - 28287612
Alignment:
Q  121 agtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||    
T  28287694 agtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg-ttgtgcgatctgtg 28287612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 17037073 - 17037186
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatg-aacttgtttgtgtg 189  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||| ||||| ||  || |||| ||| ||| ||| |||||||| |  ||||||| |||    
T  17037073 gaacccagaacaacattagtttgggaattaagtggtacttgccatgacgagtgagaactctcgcctcgcgagcacatccagaatgtaggttgtttgagtg 17037172  T
Q  190 tttgtgcgatctgtg 204  Q
     ||||||||||||||    
T  17037173 -ttgtgcgatctgtg 17037186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 27186078 - 27185965
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  27186078 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 27185979  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  27185978 ttgcgcgatctgtg 27185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 27207914 - 27207801
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  27207914 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 27207815  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  27207814 ttgcgcgatctgtg 27207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 27241314 - 27241427
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  27241314 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 27241413  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  27241414 ttgcgcgatctgtg 27241427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 27263162 - 27263275
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  27263162 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 27263261  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  27263262 ttgcgcgatctgtg 27263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22331808 - 22331756
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  22331808 gaacctagaacaacgttagtttggaaattgactggtactcgccatggcgagta 22331756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 25595092 - 25595144
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||   ||||||||||||||||||||||    
T  25595092 acccagaacaactttagtttgggaattgttgggtactcgccatggcgagtaag 25595144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 32564980 - 32565093
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  32564980 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 32565079  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  32565080 ttgtgcgatctgtg 32565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 31316832 - 31316880
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  31316832 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 31316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 17016660 - 17016773
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 189  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||    
T  17016660 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtg 17016758  T
Q  190 tttgtgcgatctgtg 204  Q
     ||||||||||||||    
T  17016759 gttgtgcgatctgtg 17016773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 34369711 - 34369824
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| ||||||||  | |||| | ||||||||||||||||||| || || |||| ||| ||| ||  ||||| || | |   ||| ||||    
T  34369711 gaacccagaacaacattagtttgtaatttgacttgtactcgccatggcgagtatgtactctcgcctcgcgagcacttccagattggagtgccttgagtgt 34369810  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  34369811 ttgtgcgatctgtg 34369824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 4168291 - 4168239
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||| |||||| |||||||||||||||  ||||| |||||||||||| ||||    
T  4168291 acccataacaactttagtttgggaattgtttggtaatcgccatggcgattaag 4168239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 4208971 - 4208919
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||| |||||| |||||||||||||||  ||||| |||||||||||| ||||    
T  4208971 acccataacaactttagtttgggaattgtttggtaatcgccatggcgattaag 4208919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19808895 - 19808843
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||||| || |||||| | |||| |||||||||||||||||||||    
T  19808895 gaacctagaacaacattggtttggaatttgactggtactcgccatggcgagta 19808843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 24314819 - 24314867
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||| ||||||||||    
T  24314819 acccagaacaactttagtttgggaattgtttagtactcaccatggcgag 24314867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 25111207 - 25111155
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| ||| |||||||| ||  |||||||||||||||| ||||||    
T  25111207 acccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaag 25111155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 25117810 - 25117758
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| ||| |||||||| ||  |||||||||||||||| ||||||    
T  25117810 acccagaacaactttaatttgggaaatgtttggtactcgccatggctagtaag 25117758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27609121 - 27608994
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  27609121 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27609022  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  27609021 acttgtttgtgtgtttgtgcgatctgtg 27608994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22265327 - 22265200
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  22265327 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22265228  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  22265227 acttgtttatgtgtttatgcgatctgtg 22265200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27615727 - 27615600
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||| ||||| |||||| ||||    
T  27615727 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtaaaaccaggatga 27615628  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  27615627 acttgtttgtgtgtttgtgcgatctgtg 27615600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 27663513 - 27663640
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  27663513 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27663612  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  27663613 acttgtttatgtgtttatgcgatctgtg 27663640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 27670153 - 27670280
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  27670153 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27670252  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  27670253 acttgtttatgtgtttatgcgatctgtg 27670280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 204
Target Start/End: Original strand, 41097947 - 41098073
Alignment:
Q  78 gtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaa 177  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| |||||    
T  41097947 gtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41098046  T
Q  178 cttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||| ||||||| |||||||||||    
T  41098047 cttgtttatgtgtttatgcgatctgtg 41098073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 41769623 - 41769497
Alignment:
Q  78 gtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaa 177  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| |||||    
T  41769623 gtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41769524  T
Q  178 cttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||| ||||||| |||||||||||    
T  41769523 cttgtttatgtgtttatgcgatctgtg 41769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 17706654 - 17706781
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| ||| |||||||| ||||    
T  17706654 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccaggatga 17706753  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  17706754 acttgtttatgtgtttatgcgatctgtg 17706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 41776197 - 41776071
Alignment:
Q  78 gtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaa 177  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| |||||    
T  41776197 gtaggatcagagggaacctagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaa 41776098  T
Q  178 cttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||| ||||||| |||||||||||    
T  41776097 cttgtttatgtgtttatgcgatctgtg 41776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14994759 - 14994886
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| |||||||||||||||||    
T  14994759 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 14994858  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  14994859 acttgcttgagtgtttgtgcgatctgtg 14994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 22062605 - 22062732
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  22062605 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22062704  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  22062705 acttgtttatgtgtttatgcgatctgtg 22062732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23610284 - 23610157
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| ||| ||||||||||||     
T  23610284 tgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccagaatgg 23610185  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| |||||||||||||||||||    
T  23610184 aattgtttatgtgtttgtgcgatctgtg 23610157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23841680 - 23841553
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| ||| ||||||||||||     
T  23841680 tgtaggatcagaggaaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagcacaaccagaatgg 23841581  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| |||||||||||||||||||    
T  23841580 aattgtttatgtgtttgtgcgatctgtg 23841553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 15001402 - 15001529
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| |||||||||||||||||    
T  15001402 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatga 15001501  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| || |||||||||||||||    
T  15001502 acttgcttgagtatttgtgcgatctgtg 15001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23584522 - 23584395
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| |||||||||||||| ||    
T  23584522 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaaggactctcgcctcgcgagtacaaccagaacga 23584423  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |||||| |||||||||||||||||||    
T  23584422 aattgtttttgtgtttgtgcgatctgtg 23584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 24471971 - 24472098
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  24471971 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 24472070  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  24472071 acttgtttatgtgtttatgcgatctgtg 24472098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 25107166 - 25107039
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  25107166 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 25107067  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  25107066 acttgattatgtgtttgtgcgatctgtg 25107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 25166259 - 25166132
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  25166259 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 25166160  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  25166159 acttgattatgtgtttgtgcgatctgtg 25166132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 34294278 - 34294403
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaac 178  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| || |||| ||| |||||||||||| ||||||    
T  34294278 taggatcacagggaacccagaacaagcttagtttgggagttgagtggtactcgccgtggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 34294377  T
Q  179 ttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||| ||||||| |||||||||||    
T  34294378 ttgtttatgtgtttatgcgatctgtg 34294403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 1692160 - 1692287
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  1692160 tgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 1692259  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  1692260 acttgcttgagtgtttgtgcgatctgtg 1692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16355227 - 16355100
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  16355227 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16355128  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16355127 acttgattatgtgtttgtgcgatctgtg 16355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16361886 - 16361759
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  16361886 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16361787  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16361786 acttgattatgtgtttgtgcgatctgtg 16361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 18038391 - 18038518
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  18038391 tgtaggatcagagggaacccaaaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 18038490  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  18038491 acttgcttgagtgtttgtgcgatctgtg 18038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 34565220 - 34565093
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  34565220 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 34565121  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  34565120 acttgattatgtgtttgtgcgatctgtg 34565093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 34571875 - 34571748
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  34571875 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 34571776  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  34571775 acttgattatgtgtttgtgcgatctgtg 34571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 27687052 - 27687179
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||| |||  || |||| ||| ||||||||||||||||     
T  27687052 tgtaggatcagagagaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagcaagaactctcgcctcgcgagtacaaccagaatgt 27687151  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  27687152 acttgcttgagtgtttgtgcgatctgtg 27687179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 19992265 - 19992138
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| |||     
T  19992265 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 19992166  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||| ||||||||||||    
T  19992165 agttgcttgtgtgttggtgcgatctgtg 19992138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 25406807 - 25406680
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  25406807 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 25406708  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  25406707 agttgcttgagtgtttgtgcgatctgtg 25406680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 37286504 - 37286631
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  37286504 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 37286603  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  37286604 agttgcttgagtgtttgtgcgatctgtg 37286631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 37293207 - 37293334
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  37293207 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 37293306  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  37293307 agttgcttgagtgtttgtgcgatctgtg 37293334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 40707503 - 40707408
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  40707503 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 40707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 40714145 - 40714050
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  40714145 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 40714050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 22327887 - 22328012
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| |||||||  ||| ||||||| ||||||||||||||||||||||||||||  ||||||| ||| ||| ||| |||| |||     
T  22327887 tgtaggatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactttcgcctcgcgagcacagccaggatgc 22327986  T
Q  177 acttgtttgtgtgtttgtgcgatctg 202  Q
    | ||| | ||||||||||||||||||    
T  22327987 agttgctggtgtgtttgtgcgatctg 22328012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 22334541 - 22334666
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| |||     
T  22334541 tgtaggatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactatcgcctcgcgagcacagccaggatgc 22334640  T
Q  177 acttgtttgtgtgtttgtgcgatctg 202  Q
    | ||| | ||||||||||||||||||    
T  22334641 agttgctggtgtgtttgtgcgatctg 22334666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22133380 - 22133253
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| |||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  22133380 tgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 22133281  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  22133280 agttgcttgagtgtttgtgcgatctgtg 22133253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22140072 - 22139945
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| |||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  22140072 tgtatgatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 22139973  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  22139972 agttgcttgagtgtttgtgcgatctgtg 22139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 41294158 - 41294285
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| |||||  |||||     
T  41294158 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaacttgaatgt 41294257  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  41294258 agttgcttgagtgtttgtgcgatctgtg 41294285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 37544410 - 37544296
Alignment:
Q  91 gaacccagaacaaccttagtttggga-attgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 189  Q
    |||||||||||||| | ||||||||| | | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||    
T  37544410 gaacccagaacaacatcagtttgggagaatcagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtg 37544311  T
Q  190 tttgtgcgatctgtg 204  Q
    |||||||||||||||    
T  37544310 tttgtgcgatctgtg 37544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 33726227 - 33726114
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  33726227 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 33726128  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  33726127 ttgtgcgatctgtg 33726114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22588476 - 22588349
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  |||| |||||||||  ||||||||||  |||||||||||||||| ||||||||||  || |||| |||  || ||||||||||||     
T  22588476 tgtaggatcagattgaactcagaacaacactagtttgggagatgagtggtactcgccaaggcgagtaagaactctcgcctcgcaagcacaaccagaatgt 22588377  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  22588376 agttgcttgagtgtttgtgcgatctgtg 22588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 27517133 - 27517039
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    |||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  27517133 tgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgcctcgcgagtacaaccaga 27517039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 27523770 - 27523676
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    |||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  27523770 tgtaggatcagaggaaacccagaacaagcttagtt-gggagttgagtggtgctcgccatggcgagtaaggactctcgcctcgcgagtacaaccaga 27523676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 17284448 - 17284321
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||| |||      
T  17284448 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccataattt 17284349  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  17284348 agatgcttgagtgtttgtgcgatctgtg 17284321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 29477678 - 29477805
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||| ||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||| |||||      
T  29477678 tgtaggatcagattgaacccataacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaactagaattt 29477777  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  29477778 agatgcttgagtgtttgtgcgatctgtg 29477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 29471083 - 29471210
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||| ||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| ||||| |||||      
T  29471083 tgtaggatcagattgaacccataacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaactagaattt 29471182  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  29471183 agatgcttgagtgtttgtgcgatctgtg 29471210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 15236504 - 15236601
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  15236504 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 15236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 20776256 - 20776143
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| |  | |||||||||    
T  20776256 gaacccagaacaacatcagttgggagtttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagctttttgtgtgt 20776157  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  20776156 ttgtgcgatctgtg 20776143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23337026 - 23337078
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||    
T  23337026 gaacccataacaactttagtttggaaattgaatggtactcgccatggcgagta 23337078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 21667544 - 21667657
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  21667544 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtga 21667643  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  21667644 ttgtgcgatctgtg 21667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 29316786 - 29316673
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  29316786 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 29316687  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  29316686 ttgtgcgatctgtg 29316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 19768714 - 19768666
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  19768714 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 19768666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 19775310 - 19775262
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  19775310 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 19775262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 23250306 - 23250258
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  23250306 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 23250258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 22410336 - 22410390
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaag 145  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||    
T  22410336 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaag 22410390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 14359557 - 14359609
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||||| || |||||| | |||| |||||||||||||||||||||    
T  14359557 gaacctagaacaacattggtttggaatttgactggtactcgccatggcgagta 14359609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 22258211 - 22258262
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  22258211 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 22258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 24020626 - 24020586
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgcc 133  Q
    |||||||||||| |||||||||||||||  |||||||||||    
T  24020626 acccagaacaactttagtttgggaattgtttggtactcgcc 24020586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 25808226 - 25808274
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| || ||||||||||||  | |||||||||||||||||    
T  25808226 acccagaacaacttttgtttgggaattgtttagtactcgccatggcgag 25808274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 8048220 - 8048343
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8048220 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8048319  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||||||||||||||    
T  8048320 acttgtttgtgtgtttgtgcgatc 8048343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 8054833 - 8054956
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8054833 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8054932  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||||||||||||||    
T  8054933 acttgtttgtgtgtttgtgcgatc 8054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 19780014 - 19780141
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  19780014 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 19780113  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  19780114 acttgtttatgtgtttatgcgatctgtg 19780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 4772478 - 4772351
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  4772478 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 4772379  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||  | |||||||||||||||||||    
T  4772378 acttggctatgtgtttgtgcgatctgtg 4772351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 17962049 - 17962176
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  17962049 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17962148  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||| |||| ||||||| |||||||||||    
T  17962149 actcgtttatgtgtttatgcgatctgtg 17962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22195001 - 22194874
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  22195001 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 22194902  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  22194901 acttgattttgtgtttgtgcgatctgtg 22194874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 36884459 - 36884586
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  36884459 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 36884558  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  36884559 acttgattatgtgtttgtgcgatctgtg 36884586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 15148837 - 15148710
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  15148837 tgtaggatcagagggaacccaaaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15148738  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  15148737 acttgattatgtgtttgtgcgatctgtg 15148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 15383218 - 15383345
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| ||||||| |||| ||||    
T  15383218 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacagccaggatga 15383317  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  15383318 acttgattatgtgtttgtgcgatctgtg 15383345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23954529 - 23954402
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  | |||| ||| |||||||||||| ||||    
T  23954529 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatctcgcctcgcgagtacaaccaggatga 23954430  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  23954429 acttgtttatgtgtttatgcgatctgtg 23954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23961191 - 23961064
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  | |||| ||| |||||||||||| ||||    
T  23961191 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtacttgccatggcgagtaagttatctcgcctcgcgagtacaaccaggatga 23961092  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  23961091 acttgtttatgtgtttatgcgatctgtg 23961064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 18024154 - 18024279
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaac 178  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| || |||| ||| |||||||||||| ||||||    
T  18024154 taggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 18024253  T
Q  179 ttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||| ||||||| |||||||||||    
T  18024254 ttgtttatgtgtttatgcgatctgtg 18024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 8385216 - 8385089
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8385216 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8385117  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  8385116 acttgattatgtgtttgtgcgatctgtg 8385089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 8391871 - 8391744
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  8391871 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 8391772  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  8391771 acttgattatgtgtttgtgcgatctgtg 8391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 12475401 - 12475274
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  12475401 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 12475302  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  12475301 acttgtttatgtgtttatgcgatctgtg 12475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 12482031 - 12481904
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  12482031 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 12481932  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  12481931 acttgtttatgtgtttatgcgatctgtg 12481904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 14074212 - 14074085
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  14074212 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 14074113  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  14074112 acttgattatgtgtttgtgcgatctgtg 14074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 15256990 - 15256863
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  15256990 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 15256891  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  15256890 acttgattatgtgtttgtgcgatctgtg 15256863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 15362514 - 15362387
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  15362514 tgtaggatcagagggaaccgagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 15362415  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||| ||||||||||||||    
T  15362414 acttgattatgtgcttgtgcgatctgtg 15362387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16231566 - 16231693
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| ||||| | |||| ||||    
T  16231566 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtatagccaggatga 16231665  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16231666 acttgattatgtgtttgtgcgatctgtg 16231693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 17808795 - 17808668
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  17808795 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17808696  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  17808695 acttgattatgtgtttgtgcgatctgtg 17808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 20115524 - 20115397
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  20115524 tgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 20115425  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  20115424 acttgcttgagtgtttgtgcgatctgtg 20115397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 17089702 - 17089829
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || | ||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  17089702 tgtaggatcagagggaacccagaacaagcttagtttgtgagtggagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17089801  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  17089802 acttgattatgtgtttgtgcgatctgtg 17089829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 29040623 - 29040750
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  29040623 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 29040722  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  29040723 acttgattatgtgtttgtgcgatctgtg 29040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14268182 - 14268309
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||| ||| ||| |||| |||     
T  14268182 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactttcgcctcgcgagcacagccaggatgt 14268281  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  14268282 agttgcttgagtgtttgtgcgatctgtg 14268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 7900895 - 7901022
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  7900895 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 7900994  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  7900995 agttgcttgagtgtttgtgcgatctgtg 7901022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 15321818 - 15321945
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  15321818 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 15321917  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| |||||| |||||||||||    
T  15321918 aattgcttgagtgtttatgcgatctgtg 15321945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 18296007 - 18295912
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  18296007 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 18295912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 51493542 - 51493669
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  51493542 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 51493641  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  51493642 agttgcttgagtgtttgtgcgatctgtg 51493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 18071536 - 18071423
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  18071536 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 18071437  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  18071436 ttgtgcgatctgtg 18071423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 6873100 - 6873227
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  6873100 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 6873199  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||| ||||||    
T  6873200 agttgcttgagtgtttgtgcgttctgtg 6873227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14298552 - 14298679
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| |||     
T  14298552 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 14298651  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||| ||||||||||||    
T  14298652 agttgcttgtgtgttggtgcgatctgtg 14298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 26284632 - 26284759
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  26284632 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 26284731  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  26284732 agatgcttgagtgtttgtgcgatctgtg 26284759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 40478529 - 40478402
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  40478529 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 40478430  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  40478429 agatgcttgagtgtttgtgcgatctgtg 40478402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 14305176 - 14305303
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||| ||||||  || |||| ||| ||| ||| |||| |||     
T  14305176 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcaagtaagaactctcgcctcgcgagcacagccaggatgc 14305275  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||| ||||||| ||||    
T  14305276 agttgcttgtgtgttggtgcgatatgtg 14305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 40471856 - 40471729
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  40471856 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 40471757  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  40471756 agatgcttgagtgtttgtgcgatctgtg 40471729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 17810654 - 17810557
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  17810654 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 17810557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 9271842 - 9271926
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatg 175  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||  || |||| ||| |||||  |||||||||    
T  9271842 gaacccagaacaactttagtttgggatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagtatgaccagaatg 9271926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 14757146 - 14757214
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  14757146 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 14757214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 30234918 - 30234970
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  30234918 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 30234970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 17991393 - 17991430
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgg 114  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17991393 tgtaggatcagagggaacccagaacaaccttagtttgg 17991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 35170996 - 35170944
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||||| ||||||||| |||||| |||||||||||||||||||||    
T  35170996 gaacctagaacaacattagtttggaaattgactggtactcgccatggcgagta 35170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 12349312 - 12349425
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  12349312 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 12349411  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  12349412 ttgtgcgatctgtg 12349425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 386078 - 386134
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 133  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||    
T  386078 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgcc 386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 16956390 - 16956438
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  16956390 acccagaacaactttagtttgggaattgtttcgtactcgccatggcgag 16956438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 55795825 - 55795774
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| || | |||||||||||||||||||||||||    
T  55795825 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagt 55795774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 12299636 - 12299749
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 189  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||    
T  12299636 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtg 12299734  T
Q  190 tttgtgcgatctgtg 204  Q
     ||||||||||||||    
T  12299735 gttgtgcgatctgtg 12299749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 19941894 - 19941942
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| ||||||||| |||||  | |||||||||||||||||    
T  19941894 acccagaacaactttagtttggaaattgtttagtactcgccatggcgag 19941942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 23081954 - 23081906
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    ||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  23081954 acccaaaacaactttagtttgggaattgtttagtactcgccatggcgag 23081906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 27710111 - 27710063
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    ||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  27710111 acccataacaactttagtttgggaattgtttagtactcgccatggcgag 27710063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 30909 - 30782
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  30909 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 30810  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  30809 acttgtttatgtgtttatgcgatctgtg 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 72622 - 72749
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  72622 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 72721  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  72722 acttgtttatgtgtttatgcgatctgtg 72749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 8441 - 8314
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  |||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||  ||| |||||||||||      
T  8441 tgtaggatcagattgaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcacgagcacaaccagaattt 8342  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| |||||||||| |||||||    
T  8341 agatgcttgagtgtttgtgcaatctgtg 8314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 17669294 - 17669421
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  17669294 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17669393  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  17669394 acttgtttatgtgtttatgcgatctgtg 17669421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 17675946 - 17676073
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  17675946 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 17676045  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  17676046 acttgtttatgtgtttatgcgatctgtg 17676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 20019664 - 20019787
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| | | |||||||||||| ||||    
T  20019664 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgccttgcgagtacaaccaggatga 20019763  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||||||||||||||    
T  20019764 acttgtttgtgtgtttgtgcgatc 20019787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 5534163 - 5534290
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  5534163 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 5534262  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  5534263 acttgtttatgtgtttatgcgatctgtg 5534290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 21915294 - 21915421
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  21915294 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 21915393  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  21915394 acttgtttatgtgtttatgcgatctgtg 21915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 22084213 - 22084086
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  22084213 tgtaggatcagagggaacccagaacaaccttagtttgggagttgaggggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 22084114  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  22084113 acttgattatgtgtttgtgcgatctgtg 22084086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 20013588 - 20013710
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| | | |||||||||||| ||||    
T  20013588 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgccttgcgagtacaaccaggatga 20013687  T
Q  177 acttgtttgtgtgtttgtgcgatc 200  Q
    ||||||||||||| ||||||||||    
T  20013688 acttgtttgtgtg-ttgtgcgatc 20013710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 28455141 - 28455014
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||||||| || |||| |||||||||||||||| ||||    
T  28455141 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgggagtacaaccaggatga 28455042  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  28455041 acttgcttatgtgtttgtgcgatctgtg 28455014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 22123109 - 22123236
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| ||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||  || |||| ||| ||||||||||||||||     
T  22123109 tgtaagatcagagggaacccagaacaacattagtttgggagatgagtggtactctccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 22123208  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||| ||||||||||||||||||    
T  22123209 acttgtttgagtgtttgtgcgatctgtg 22123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 8354487 - 8354614
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||||||  || |||| ||| ||| ||| |||| |||     
T  8354487 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtattcgccacggcgagtaagaactctcgcctcgcgagcacagccaggatgt 8354586  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  8354587 agttgcttgtgagtttgtgcgatctgtg 8354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 19111608 - 19111513
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  19111608 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 19111513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 19117899 - 19117804
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  19117899 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 19117804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16882896 - 16883023
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||| ||||||  ||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||     
T  16882896 tgtagaatcagattgaacccagaacaacactagtttgggagatgagcggtactcgccatggcgagtaagaactttcgcctcgcgagcacaaccagaatgt 16882995  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  16882996 agttgcttgagtgtttgtgcgatctgtg 16883023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 18855318 - 18855191
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||| |||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  18855318 tgtaggatcagattgaacccagaacaacactagtgtgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 18855219  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  18855218 agttgcttgagtgtttgtgcgatctgtg 18855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 18865713 - 18865586
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  18865713 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 18865614  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||| ||||||    
T  18865613 agttgcttgagtgtttgtgcgttctgtg 18865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 19496758 - 19496645
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  19496758 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 19496659  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  19496658 ttgtgcgatctgtg 19496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 22115444 - 22115509
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  22115444 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 22115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 29123467 - 29123340
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  29123467 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 29123368  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  29123367 agatgcttgagtgtttgtgcgatctgtg 29123340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 22048314 - 22048201
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| ||||| |||||||| | | ||| ||| ||||    
T  22048314 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtataaccagaaggtagttgcttgagtgt 22048215  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  22048214 ttgtgcgatctgtg 22048201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 22122146 - 22122195
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggt 126  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  22122146 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggt 22122195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19905864 - 19905812
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||| | ||||||||| |||||| |||||||||||||||||||||    
T  19905864 gaacctagaacaccattagtttggaaattgactggtactcgccatggcgagta 19905812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 18065699 - 18065648
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| || | |||||||||||||||||||||||||    
T  18065699 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagt 18065648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 20023668 - 20023713
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggc 138  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||    
T  20023668 acccagaacaactttagtttgggaattgtttagtactcgccatggc 20023713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 10846007 - 10846133
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||||||||    
T  10846007 tgtaggatcagagggaacccagaacaaccttaatttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatga 10846106  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||| ||||||||||||||    
T  10846107 acttgtttgtgtg-ttgtgcgatctgtg 10846133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 26788528 - 26788655
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  26788528 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26788627  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  26788628 acttgtttatgtgtttatgcgatctgtg 26788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 26794118 - 26794245
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  26794118 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26794217  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  26794218 acttgtttatgtgtttatgcgatctgtg 26794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 37615774 - 37615647
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  37615774 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 37615675  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  37615674 acttgtttatgtgtttatgcgatctgtg 37615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 26889838 - 26889711
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||    
T  26889838 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaaccaggatga 26889739  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  26889738 acttgattatgtgtttgtgcgatctgtg 26889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 6599101 - 6598974
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  6599101 tgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6599002  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||||||| |||||||    
T  6599001 acttgtttatgtgtttgtgcaatctgtg 6598974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 6605781 - 6605654
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  6605781 tgtaggatcagagggaacccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 6605682  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||||||| |||||||    
T  6605681 acttgtttatgtgtttgtgcaatctgtg 6605654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 10153458 - 10153585
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| ||| |||||||| ||||    
T  10153458 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagcacaaccaggatga 10153557  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  10153558 acttgtttgtgtgtttgtgcgatctgtg 10153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16623778 - 16623905
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||     
T  16623778 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgt 16623877  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  16623878 agttgcttgagtgtttgtgcgatctgtg 16623905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 14672925 - 14673050
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaac 178  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| || |||| ||| |||||||||||| ||||||    
T  14672925 taggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgcgatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 14673024  T
Q  179 ttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||| ||||||| |||||||||||    
T  14673025 ttgtttatgtgtttatgcgatctgtg 14673050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 418383 - 418256
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  418383 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 418284  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  418283 acttgtttatgtgtttatgcgatctgtg 418256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 31422276 - 31422403
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  31422276 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 31422375  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  31422376 acttgtttatgtgtttatgcgatctgtg 31422403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 5106607 - 5106734
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||| || |||| ||| ||||||||| || ||||    
T  5106607 tgtaggatcagagggagcccagaacaaccttagtttgggagatgagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaactaggatga 5106706  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  5106707 acttgtttatgtgtttatgcgatctgtg 5106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16489393 - 16489520
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||  || |||| ||| ||||||||||||||||     
T  16489393 tgtaggatcagagggaacccagaacaactttagtttgggagatgagtggtactcgccacggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 16489492  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| ||| ||||||||||||||||||    
T  16489493 acttgcttgagtgtttgtgcgatctgtg 16489520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16634234 - 16634107
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  16634234 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16634135  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16634134 acttgattatgtgtttgtgcgatctgtg 16634107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16640844 - 16640717
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  16640844 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16640745  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16640744 acttgattatgtgtttgtgcgatctgtg 16640717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 43161509 - 43161382
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  43161509 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43161410  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  43161409 acttgattatgtgtttgtgcgatctgtg 43161382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 43167746 - 43167619
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  43167746 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43167647  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  43167646 acttgattatgtgtttgtgcgatctgtg 43167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 48423751 - 48423624
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  48423751 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 48423652  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  48423651 acttgcttatgtgtttgtgcgatctgtg 48423624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 48430529 - 48430402
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  48430529 tgtaggatcagagggaacccagaacaagctcagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 48430430  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  48430429 acttgcttatgtgtttgtgcgatctgtg 48430402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 1332784 - 1332910
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||| | || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  1332784 tgtaggatcagagggaacccagaacaagcttagtt-gtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 1332882  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  1332883 acttgattatgtgtttgtgcgatctgtg 1332910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 53380075 - 53380201
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||||||  || |||| ||| | |||||| ||||||||    
T  53380075 tgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgggtacaatcagaatga 53380174  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||||||| |||||||||||||||    
T  53380175 acttgtttgtgt-tttgtgcgatctgtg 53380201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 53386727 - 53386853
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||||||  || |||| ||| | |||||| ||||||||    
T  53386727 tgtaggatcagaggggacccataacaaccttagtttggaagttgagtggtactcgccatggcgagtaaggactctcgcctcgcgggtacaatcagaatga 53386826  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||||||| |||||||||||||||    
T  53386827 acttgtttgtgt-tttgtgcgatctgtg 53386853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16747562 - 16747689
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||  | |||||||||||||||||||||||   |||||  |||||||||||||||| |||||| |||| ||| |||||||||||| | ||    
T  16747562 tgtaggatcagagaaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctcgcctcgcgagtacaaccaggacga 16747661  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| |||||||||||||||||||    
T  16747662 acttgtttatgtgtttgtgcgatctgtg 16747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 16758294 - 16758421
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||   | |||||||||||||||||||||||   |||||  |||||||||||||||| |||||| |||| ||| |||||||||||| | ||    
T  16758294 tgtaggatcagataaagcccagaacaaccttagtttgggagaagagtgtcactcgccatggcgagtgagtgctctcgcctcgcgagtacaaccaggacga 16758393  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| |||||||||||||||||||    
T  16758394 acttgtttatgtgtttgtgcgatctgtg 16758421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 5149695 - 5149818
Alignment:
Q  81 ggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaactt 180  Q
    ||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||| | ||    
T  5149695 ggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgtagtt 5149794  T
Q  181 gtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||||||||||||    
T  5149795 gcttgagtgtttgtgcgatctgtg 5149818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 5221787 - 5221660
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||  || |||| ||| ||| ||| |||| ||      
T  5221787 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgacacggcgagtaagaactctcgcctcgcgagcacagccaggatat 5221688  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  5221687 agttgcttgagtgtttgtgcgatctgtg 5221660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 13251102 - 13251007
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  13251102 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 13251007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 13257748 - 13257653
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  13257748 tgtaggatcagagggaacccagaacaagcttagtttggaagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 13257653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 3690988 - 3690875
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  3690988 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 3690889  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  3690888 ttgtgcgatctgtg 3690875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10904596 - 10904483
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  10904596 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10904497  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  10904496 ttgtgcgatctgtg 10904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10911268 - 10911155
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  10911268 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 10911169  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  10911168 ttgtgcgatctgtg 10911155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 41201521 - 41201648
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  41201521 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 41201620  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  41201621 agatgcttgagtgtttgtgcgatctgtg 41201648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10004006 - 10003893
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  10004006 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10003907  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  10003906 ttgtgcgatctgtg 10003893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10010653 - 10010540
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| |||     
T  10010653 gaacccagaacaacttcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgg 10010554  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  10010553 ttgtgcgatctgtg 10010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 20057140 - 20057253
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||  || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  20057140 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 20057239  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  20057240 ttgtgcgatctgtg 20057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 20063778 - 20063891
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||  || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  20063778 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaaggactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 20063877  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  20063878 ttgtgcgatctgtg 20063891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 23704492 - 23704619
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  23704492 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 23704591  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  23704592 agatgcttgagtgtttgtgcgatctgtg 23704619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 23722948 - 23723075
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  23722948 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 23723047  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  23723048 agatgcttgagtgtttgtgcgatctgtg 23723075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 23741404 - 23741531
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  23741404 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 23741503  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  23741504 agatgcttgagtgtttgtgcgatctgtg 23741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 41092070 - 41092135
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  41092070 tgtaggagcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagt 41092135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 15726658 - 15726782
Alignment:
Q  80 aggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaact 179  Q
    |||||||||  ||||||||||||||  ||||||||||  | |||||||||||||||||||||||||  || |||| ||| ||| |||||||||||  |      
T  15726658 aggatcagattgaacccagaacaacactagtttgggagataagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatttaga 15726757  T
Q  180 tgtttgtgtgtttgtgcgatctgtg 204  Q
    || ||| ||||||||||||||||||    
T  15726758 tgcttgagtgtttgtgcgatctgtg 15726782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 30066331 - 30066234
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  30066331 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 30066234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 14499710 - 14499642
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  14499710 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 14499642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 11070453 - 11070356
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  11070453 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 11070356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 11165253 - 11165350
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||| ||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  11165253 tgtaggatcagattgaacccaaaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 11165350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 15692001 - 15692069
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||    
T  15692001 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactctccatggcgagtaag 15692069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 15826030 - 15825978
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  15826030 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 15825978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 19809395 - 19809343
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  19809395 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 19809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 4710663 - 4710616
Alignment:
Q  95 ccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  4710663 ccagaacaactttagtttgggatttgagtggtactcgccatggcgagt 4710616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 6608848 - 6608739
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||| ||   ||||||||||||||||||||||||||||  || |||| ||| ||| |   |||||||| | |  |||||||||    
T  6608848 gaacccagaacaacattagttgggagtttgagtggtactcgccatggcgagtaaggactctcgcctcgcgagcaagtccagaatgtagtgttttgtgtgt 6608749  T
Q  191 ttgtgcgatc 200  Q
    ||||||||||    
T  6608748 ttgtgcgatc 6608739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 10236133 - 10236185
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||| ||  |||||||||||||||||||||||    
T  10236133 acccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaag 10236185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 15991843 - 15991895
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||||||||    
T  15991843 acccaaaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 15991895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 17710331 - 17710383
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||| ||||||    
T  17710331 acccagaacaactttagtttgggaattgaatggtactcgccaaggcaagtaag 17710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 13315927 - 13315978
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaa 144  Q
    ||||||||||||  | |||||||| |||||||||||||||||||||||||||    
T  13315927 acccagaacaacactggtttgggatttgagtggtactcgccatggcgagtaa 13315978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 12482797 - 12482684
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  12482797 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 12482698  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  12482697 ttgtgcgatctgtg 12482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 1145291 - 1145339
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  1145291 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 1145339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 15349988 - 15350036
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  15349988 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 15350036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 5201592 - 5201541
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| || | |||||||||||||||||||||||||    
T  5201592 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagt 5201541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 15584457 - 15584511
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaag 145  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||    
T  15584457 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaag 15584511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 15591115 - 15591169
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaag 145  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||    
T  15591115 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtaag 15591169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 410493 - 410538
Alignment:
Q  96 cagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    ||||||||| |||||||||||||||  | |||||||||||||||||    
T  410493 cagaacaactttagtttgggaattgtttagtactcgccatggcgag 410538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 8720895 - 8720940
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggc 138  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||    
T  8720895 acccagaacaactttagtttgggaattgtttagtactcgccatggc 8720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 9072782 - 9072827
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggc 138  Q
    |||||||||||| |||||||||||||||  | ||||||||||||||    
T  9072782 acccagaacaactttagtttgggaattgtttagtactcgccatggc 9072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 4291134 - 4291090
Alignment:
Q  97 agaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||| || ||||||||||||  |||||||||||||||||||    
T  4291134 agaacaacttttgtttgggaattgtttggtactcgccatggcgag 4291090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 5420042 - 5420093
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  5420042 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 5420093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 5426440 - 5426491
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  5426440 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 5426491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 15343345 - 15343393
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    ||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  15343345 acccataacaactttagtttgggaattgtttagtactcgccatggcgag 15343393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 22643062 - 22643118
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 133  Q
    ||||||||||||   |||||||||||||  |||||||||| |||||| |||||||||    
T  22643062 tgtaggatcagacttaacccagaacaacactagtttgggagttgagttgtactcgcc 22643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 55023230 - 55023174
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgcc 133  Q
    ||||||||||||  ||||||||||||||  |||||||| |  |||||||||||||||    
T  55023230 tgtaggatcagattgaacccagaacaacactagtttggaagatgagtggtactcgcc 55023174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 22320710 - 22320837
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  22320710 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22320809  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  22320810 acttgtttatgtgtttatgcgatctgtg 22320837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 22326863 - 22326990
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  22326863 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 22326962  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  22326963 acttgtttatgtgtttatgcgatctgtg 22326990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 26877292 - 26877419
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  26877292 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 26877391  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  26877392 acttgtttatgtgtttatgcgatctgtg 26877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27216448 - 27216321
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  27216448 tgtaggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 27216349  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  27216348 acttgattatgtgtttgtgcgatctgtg 27216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 13306313 - 13306440
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  13306313 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 13306412  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  13306413 acttgattatgtgtttgtgcgatctgtg 13306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16986326 - 16986199
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  16986326 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 16986227  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  16986226 acttgattatgtgtttgtgcgatctgtg 16986199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 28431636 - 28431763
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  28431636 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 28431735  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  28431736 acttgattatgtgtttgtgcgatctgtg 28431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 19489650 - 19489771
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaac 178  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||||    
T  19489650 taggatcagagggaacccataacaagcttagtttgggagttgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaac 19489749  T
Q  179 ttgtttgtgtgtttgtgcgatc 200  Q
    |||||| ||||||| |||||||    
T  19489750 ttgtttatgtgtttttgcgatc 19489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 9340665 - 9340538
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  9340665 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9340566  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  9340565 acttgattatgtgtttgtgcgatctgtg 9340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 9489299 - 9489172
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  9489299 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9489200  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  9489199 acttgattatgtgtttgtgcgatctgtg 9489172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 9608560 - 9608433
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  9608560 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 9608461  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  9608460 acttgattatgtgtttgtgcgatctgtg 9608433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 24913688 - 24913815
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||  || |||| ||| ||| |||||||||||||    
T  24913688 tgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactctcgcctcgcgagcacaaccagaatga 24913787  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||||||||||||||||    
T  24913788 agttgcttgtgtgtttgtgcgatctgtg 24913815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 16922907 - 16922787
Alignment:
Q  84 tcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtt 183  Q
    |||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||||||| |    
T  16922907 tcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatgaacttgat 16922808  T
Q  184 tgtgtgtttgtgcgatctgtg 204  Q
    | |||||||||||||||||||    
T  16922807 tatgtgtttgtgcgatctgtg 16922787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23171420 - 23171293
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  23171420 tgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 23171321  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  23171320 agttgcttgagtgtttgtgcgatctgtg 23171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23582677 - 23582550
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  23582677 tgtaggatcagagggaacccagaacaacactaatttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 23582578  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  23582577 agttgcttgagtgtttgtgcgatctgtg 23582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27617678 - 27617551
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||  || |||| ||| ||||||||||||||||     
T  27617678 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 27617579  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||   || ||||||||||||||||||    
T  27617578 agtttcctgagtgtttgtgcgatctgtg 27617551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 29233911 - 29233784
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||  || |||| ||| ||| |||||||| |||     
T  29233911 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactctcgcctcgcgagcacaaccaggatgt 29233812  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  29233811 agttgcttgtgagtttgtgcgatctgtg 29233784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 29347210 - 29347083
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||  || |||| ||| ||| |||||||| |||     
T  29347210 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtactcgccacgacgagtaagaactctcgcctcgcgagcacaaccaggatgt 29347111  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||| ||||||||||||||||    
T  29347110 agttgcttgtgagtttgtgcgatctgtg 29347083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 12829452 - 12829325
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  12829452 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 12829353  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  12829352 agttgcttgagtgtttgtgcgatctgtg 12829325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27599646 - 27599519
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||| |||| |||     
T  27599646 tgtaagatcagagggaacccagaacaagtttattttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacagccaggatgc 27599547  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||||||||||||||||    
T  27599546 agttgcttgtgtgtttgtgcgatctgtg 27599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 1843465 - 1843338
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||| |||||||||||||| |||||||  ||| ||||||| ||||||||||||||||||||||||| ||  || |||||||| ||| |||||||| |||     
T  1843465 tgtaagatcagagggaacctagaacaagtttattttgggagttgagtggtactcgccatggcgagtgagaactctcgcttcgcgagcacaaccaggatgc 1843366  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||||||||| ||||||||||||    
T  1843365 agttgcttgtgtgttggtgcgatctgtg 1843338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 16997432 - 16997337
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  16997432 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 16997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 17004065 - 17003970
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  17004065 tgtaggaccagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 16928730 - 16928643
Alignment:
Q  85 cagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  || |||| ||| |||||||||||||    
T  16928730 cagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcgagtaagaactctcgcctcgcgagtacaaccaga 16928643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10866740 - 10866627
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  10866740 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 10866641  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  10866640 ttgcgcgatctgtg 10866627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 10873907 - 10873794
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  10873907 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 10873808  T
Q  191 ttgtgcgatctgtg 204  Q
    ||| ||||||||||    
T  10873807 ttgcgcgatctgtg 10873794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 10101369 - 10101466
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  10101369 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 10101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 37318641 - 37318589
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  37318641 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 37318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 13970109 - 13970157
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  13970109 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 13970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 24715078 - 24715030
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  24715078 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 24715030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 27197253 - 27197201
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||| |||||| | ||||||||| |||||| |||||||||||||||||||||    
T  27197253 gaacctagaacaccattagtttggaaattgactggtactcgccatggcgagta 27197201  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 41604471 - 41604519
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  41604471 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 41604519  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 41610368 - 41610416
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  41610368 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 41610416  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 45057165 - 45057213
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  45057165 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 45057213  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 27369670 - 27369619
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| || | |||||||||||||||||||||||||    
T  27369670 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagt 27369619  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 27376180 - 27376129
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| || | |||||||||||||||||||||||||    
T  27376180 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagt 27376129  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 24872146 - 24872199
Alignment:
Q  92 aacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||| ||||||||| | |||  | |||||||||||||||||||||    
T  24872146 aacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaag 24872199  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 24880031 - 24880084
Alignment:
Q  92 aacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||| ||||||||| | |||  | |||||||||||||||||||||    
T  24880031 aacccagaacaacattagtttggaacttgtcttgtactcgccatggcgagtaag 24880084  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 44380931 - 44380982
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  44380931 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 44380982  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 44387601 - 44387652
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  44387601 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 44387652  T

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Target: scaffold0155 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 9540 - 9667
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || | ||| |||||||||||| ||||    
T  9540 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagtactctcacctcgcgagtacaaccaggatga 9639  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  9640 acttgtttatgtgtttatgcgatctgtg 9667  T

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Target: scaffold0052 (Bit Score: 92; Significance: 7e-45; HSPs: 3)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 10741 - 10614
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  10741 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 10642  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  10641 acttgtttgtgtgtttgtgcgatctgtg 10614  T

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Target: scaffold0052; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 57163 - 57036
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  57163 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 57064  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||||||||||||||||||||||||||    
T  57063 acttgtttgtgtgtttgtgcgatctgtg 57036  T

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Target: scaffold0052; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 776 - 903
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||||||||  || |||| ||| ||| |||||||| ||||    
T  776 tgtaggatcagagggaacccagaacaacactagtttgggagttgagtggtactcgccgtggcgagtaagaactctcgcctcgcgagcacaaccaggatga 875  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  876 agttgcttgagtgtttgtgcgatctgtg 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 7e-45; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 20215652 - 20215779
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  20215652 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 20215751  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  20215752 acttgtttatgtgtttatgcgatctgtg 20215779  T

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Target: chr1; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 46157044 - 46157171
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  46157044 tgtaggatcagagggaacccagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 46157143  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  46157144 acttgattatgtgtttgtgcgatctgtg 46157171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 44844608 - 44844734
Alignment:
Q  79 taggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaa-ccagaatgaa 177  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||| |||||||| |||| |||||    
T  44844608 taggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagagctctcgcctcgcgagtacaacccaggatgaa 44844707  T
Q  178 cttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||| || |||||||||||||||||||    
T  44844708 cttgattatgtgtttgtgcgatctgtg 44844734  T

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Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 43078822 - 43078695
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  43078822 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 43078723  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  43078722 acttgattatgtgtttgtgcgatctgtg 43078695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 18599829 - 18599956
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||||||||||||||||     
T  18599829 tgtaggatcagagggaacccataacaactttagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccagaatgt 18599928  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| |||  |||||||||||||||||    
T  18599929 acttgcttgaatgtttgtgcgatctgtg 18599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 41478300 - 41478428
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaacc-agaatg 175  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||  || |||| ||| |||||||||| ||||||    
T  41478300 tgtaggatcagagggaacccagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagtacaaccaagaatg 41478399  T
Q  176 aacttgtttgtgtgtttgtgcgatctgtg 204  Q
     | ||| ||| ||||||||||||||||||    
T  41478400 taattgcttgagtgtttgtgcgatctgtg 41478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 21829096 - 21828969
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  |||||||||| |||||||||||||||| |||||||||||  || |||| ||| ||| ||||| ||||||     
T  21829096 tgtaggatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccttggcgagtaagaactctcgcctcgcgagcacaactagaatgt 21828997  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  21828996 agttgcttgagtgtttgtgcgatctgtg 21828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 51328402 - 51328497
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||  || |||| ||| |||||||||||||    
T  51328402 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactctcgcctcgcgagtacaaccaga 51328497  T

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Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 51335036 - 51335131
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccaga 172  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||  || |||| ||| |||||||||||||    
T  51335036 tgtaggatcagagggaacccagaacaagcttagtttgggagttgagtggtgctcgccatggcaagtaagaactctcgcctcgcgagtacaaccaga 51335131  T

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Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 16345512 - 16345625
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  16345512 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16345611  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  16345612 ttgtgcgatctgtg 16345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 16352160 - 16352273
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  16352160 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 16352259  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  16352260 ttgtgcgatctgtg 16352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 41356025 - 41356138
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  41356025 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 41356124  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  41356125 ttgtgcgatctgtg 41356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 21844609 - 21844482
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  ||||||||||  ||||||||||||||| ||| |||||||  || |||| ||| ||| ||||||||||||     
T  21844609 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccttggtgagtaagaactctcgcctcgcgagcacaaccagaatgt 21844510  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  21844509 agttgcttgagtgtttgtgcgatctgtg 21844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 41348588 - 41348701
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||  |||||||||||||||| | ||| ||| ||||    
T  41348588 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcacgagtacaaccagaatgtagttgcttgagtgt 41348687  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  41348688 ttgtgcgatctgtg 41348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 47659585 - 47659472
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  47659585 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 47659486  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  47659485 ttgtgcgatctgtg 47659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 1011105 - 1011008
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  1011105 tgtaggatcagattgaacccagaacaacactagtttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 1011008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19063888 - 19063836
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    |||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  19063888 gaacccagaacaacattagtttggatattgactggtactcgccatggcgagta 19063836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19105121 - 19105069
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    ||||||| |||||| ||||||||| |||||| |||||||||||||||||||||    
T  19105121 gaacccataacaacattagtttggaaattgactggtactcgccatggcgagta 19105069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19111778 - 19111726
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    |||||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  19111778 gaacccagaacaacattagtttggatattgactggtactcgccatggcgagta 19111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 27898397 - 27898510
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  27898397 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 27898496  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  27898497 ttgtgcgatctgtg 27898510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 43063014 - 43063127
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  43063014 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 43063113  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  43063114 ttgtgcgatctgtg 43063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 44756473 - 44756360
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  44756473 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 44756374  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  44756373 ttgtgcgatctgtg 44756360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 49334940 - 49334827
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  49334940 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 49334841  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  49334840 ttgtgcgatctgtg 49334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 21806940 - 21806988
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  21806940 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 21806988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 33385963 - 33386011
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  33385963 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 33386011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 33392607 - 33392655
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  33392607 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 33392655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 8305503 - 8305450
Alignment:
Q  92 aacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||| ||||||||| | |||  | |||||||||||||||||||||    
T  8305503 aacccagaacaacattagtttggaacttgtctcgtactcgccatggcgagtaag 8305450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 33394215 - 33394102
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | || ||||| |||||||||||||||| ||  || |||| ||| ||| |   |||||||| | ||||||| |||     
T  33394215 gaacccaaaacaacattagttgggaatttaagtggcactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagttgtttgagtgg 33394116  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  33394115 ttgtgcgatctgtg 33394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 18626013 - 18626064
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagt 142  Q
    ||||||| |||||| |||||| |||||| ||||||||||||||||||||||||    
T  18626013 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagt 18626064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 20524961 - 20525005
Alignment:
Q  99 aacaaccttagtttgggaattgagtggtactcgccatggcgagta 143  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||    
T  20524961 aacaacattagtttggaagttgattggtactcgccatggcgagta 20525005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 59187 - 59311
Alignment:
Q  80 aggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaact 179  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||  |||||||||||| |||| ||    
T  59187 aggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctctcgcctcacgagtacaaccaggatgagct 59286  T
Q  180 tgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| |||||||||||||||||||    
T  59287 tgtttatgtgtttgtgcgatctgtg 59311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 80 - 204
Target Start/End: Complemental strand, 139446 - 139322
Alignment:
Q  80 aggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaact 179  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||  |||||||||||| |||| ||    
T  139446 aggatcagagggaacccagaacgaccttagtttgggagttgagtggtactcgccatggcgagtaagtgctctcgcctcacgagtacaaccaggatgagct 139347  T
Q  180 tgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| |||||||||||||||||||    
T  139346 tgtttatgtgtttgtgcgatctgtg 139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 109048 - 109175
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || || | ||| |||||||||||||||||    
T  109048 tgtaggatcagagggaacccagaacaaccttagtttgggagttgagtggtactcgccatggcgagtaagaactctcacctcgcgagtacaaccagaatga 109147  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
      |||||| |||||||||||||||||||    
T  109148 gattgtttatgtgtttgtgcgatctgtg 109175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 4e-40; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 67890 - 67763
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  67890 tgtaggatcagagggaacctagaacaacattagtttgggagatgagtggtactcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 67791  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |||||||| ||||||| |||||||||||    
T  67790 acttgtttatgtgtttatgcgatctgtg 67763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 41919 - 41792
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    |||||||||| |  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  41919 tgtaggatcatattgaacccagaacaacactagtttgggatttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 41820  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  41819 agttgcttgagtgtttgtgcgatctgtg 41792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 57426 - 57299
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||| ||||||  ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  57426 tgtagaatcagattgaacccagaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 57327  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  57326 agttgcttgagtgtttgtgcgatctgtg 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 7370 - 7318
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||| ||||||||||    
T  7370 acccagaacaactttagtttgggaattgtttggtactcgccacggcgagtaag 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 39086 - 38959
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  39086 tgtaggatcagagggaacctagaacaagcttagtttgtgagttgagtggtgctcgccatggcgagtaagtactctcgcctcgcgagtacaaccaggatga 38987  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    ||||| || |||||||||||||||||||    
T  38986 acttgattatgtgtttgtgcgatctgtg 38959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 57342 - 57229
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| |||||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||| ||||    
T  57342 gaacccagaacaacattagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaatgtagttgcttgagtgt 57243  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  57242 ttgtgcgatctgtg 57229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27024 - 26897
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||| ||||||  |||||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| |||||| |||||     
T  27024 tgtaggatcagattgaacccaaaacaacactagtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaacctgaatgt 26925  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | ||| ||| ||||||||||||||||||    
T  26924 agttgcttgagtgtttgtgcgatctgtg 26897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 125837 - 125964
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  |||||||||||| |  | |||||||| ||||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||     
T  125837 tgtaggatcagattgaacccagaacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactttcgcctcgcgagcacaaccagaatgt 125936  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |   ||| ||||||||||||||||||    
T  125937 agtgacttgagtgtttgtgcgatctgtg 125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 105602 - 105729
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||| |||| |  | |||||||| ||||||||||||||||||||||||||||  || |||| ||| ||| ||||||||||||     
T  105602 tgtaggatcagattgaacccataacagcactggtttgggagttgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaatgt 105701  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    | |   ||| ||||||||||||||||||    
T  105702 agtgacttgagtgtttgtgcgatctgtg 105729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 38410 - 38297
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  38410 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 38311  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  38310 ttgtgcgatctgtg 38297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 76402 - 76515
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    |||||||||||||| | |||||||||  | |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| | | ||| ||| ||||    
T  76402 gaacccagaacaacatcagtttgggagattagtgttactcgccatggcgagtaagtactctcgcctcgcgagtacaaccagaaggtagttgcttgagtgt 76501  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  76502 ttgtgcgatctgtg 76515  T

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Target: scaffold0005 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 307478 - 307351
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatga 176  Q
    ||||||||||||  ||||||||||||||  || |||||||  |||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||      
T  307478 tgtaggatcagattgaacccagaacaacactaatttgggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacaaccagaattt 307379  T
Q  177 acttgtttgtgtgtttgtgcgatctgtg 204  Q
    |  || ||| ||||||||||||||||||    
T  307378 agatgcttgagtgtttgtgcgatctgtg 307351  T

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Target: scaffold0180 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 3077 - 3023
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3077 gaacccagaacaacgttagtttgggaattgagtggtactcgccatggcgagtaag 3023  T

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Target: scaffold0144 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 32050 - 32162
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||  || |||| ||| ||| |   |||||||| | || |||||||||    
T  32050 gaacccagaacaaccttagttgggagattgagtggtacttgccatggcgagtaagaactctcgcctcgcgagcaagtccagaatgtagtt-tttgtgtgt 32148  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  32149 ttgtgcgatctgtg 32162  T

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Target: scaffold0525 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 3600 - 3697
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaat 174  Q
    ||||||||||||  ||||||||||||||  ||||| ||||  |||||||||||||||||||||||||||  || |||| ||| ||| ||| |||||||    
T  3600 tgtaggatcagattgaacccagaacaacactagttagggagatgagtggtactcgccatggcgagtaagaactctcgcctcgcgagcacatccagaat 3697  T

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Target: scaffold0431 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 12810 - 12758
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  12810 acccagaacaactttagtttgggaattgtttggtactcgccatggcgagtaag 12758  T

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Target: scaffold0349 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 12804 - 12736
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||  ||||| ||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  12804 tgtaggatcagattgaacctagaacaacactagtttgggagatgagtggtactcgccatggcgagtaag 12736  T

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Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 3138 - 3086
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  3138 acccagaacaaccttagtttgggaattgtttggtacttgccatggcgagtaag 3086  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 78580 - 78528
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||||||| |||||||||||| ||  |||||||||||||||||||||||    
T  78580 acccagaacaactttagtttgggaaatgtttggtactcgccatggcgagtaag 78528  T

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Target: scaffold0553 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 9157 - 9044
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  9157 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 9058  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  9057 ttgtgcgatctgtg 9044  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 3816 - 3929
Alignment:
Q  91 gaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtgt 190  Q
    ||||||| |||||| |||||| || | ||||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||     
T  3816 gaacccaaaacaacattagttgggaatttgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtgg 3915  T
Q  191 ttgtgcgatctgtg 204  Q
    ||||||||||||||    
T  3916 ttgtgcgatctgtg 3929  T

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Target: scaffold0216 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 8601 - 8669
Alignment:
Q  77 tgtaggatcagagggaacccagaacaaccttagtttgggaattgagtggtactcgccatggcgagtaag 145  Q
    |||||||| |||  |||||||||||||| |||| |||| | |||| | |||||||||||||||||||||    
T  8601 tgtaggataagattgaacccagaacaacattaggttggaacttgacttgtactcgccatggcgagtaag 8669  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 74362 - 74314
Alignment:
Q  93 acccagaacaaccttagtttgggaattgagtggtactcgccatggcgag 141  Q
    |||||||||||| |||||||||||||||  | |||||||||||||||||    
T  74362 acccagaacaactttagtttgggaattgtttagtactcgccatggcgag 74314  T

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Target: scaffold0133 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 22572 - 22459
Alignment:
Q  91 gaacccagaacaaccttagtttgggaat-tgagtggtactcgccatggcgagtaagtgctttcgcttcgggagtacaaccagaatgaacttgtttgtgtg 189  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||||||||| ||  || |||| ||| ||| |   |||||||| |  |||||| |||    
T  22572 gaacccaaaacaacattagtt-gggaatctgagtggtactcgccatggcgagtgagaactctcgcctcgcgagcaagtccagaatgtagctgtttgagtg 22474  T
Q  190 tttgtgcgatctgtg 204  Q
     ||||||||||||||    
T  22473 gttgtgcgatctgtg 22459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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