View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1714-Insertion-5 (Length: 230)
Name: NF1714-Insertion-5
Description: NF1714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1714-Insertion-5 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 32009858 - 32009636
Alignment:
| Q |
8 |
attacagtaatattgcatgtgttgcttgatttattttgtgtaagctactaaatatctaacagaataatgcatggtaaactttccttgtataaagtgatag |
107 |
Q |
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| T |
32009858 |
attacagtaatattgcatgtgttgcttgatctattttgtgtaagctactaaatatctaacagaataatgcatggtaaactttccttgtataaagtgataa |
32009759 |
T |
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| Q |
108 |
agttatattgtgttgtcagtacacgttaggggaaaaagtgatgatattaaaaatgtttgcaaggtagataattcattcccatttctaaattccctactta |
207 |
Q |
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| T |
32009758 |
aattatattgtgttgtcagtacacgttaggggaaaaagtgatgatattaaaaatgtttgcaagttagataattcattcccatttctaaggtccctactta |
32009659 |
T |
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| Q |
208 |
attaagttgtatgtaagcagcag |
230 |
Q |
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||||||||||||||||||||||| |
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| T |
32009658 |
attaagttgtatgtaagcagcag |
32009636 |
T |
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