View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17140_high_23 (Length: 202)
Name: NF17140_high_23
Description: NF17140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17140_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 38691529 - 38691351
Alignment:
| Q |
1 |
ttgtcattgaatattagatggtacaattttaacattaaattgacccttcatgttacacttaacaggtttgggggttaaagacaaagcaagtcatatgttg |
100 |
Q |
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| T |
38691529 |
ttgtcattgaatattagatggtacaattttaacattaaattgacccttcatgttacacttaacaggtttaggggttaaagacaaagcaagtcatatgttg |
38691430 |
T |
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| Q |
101 |
tctttaaatgggattgatatatacaataagatctcatggatgcaaatgttgttaatatactaaccgaaaaattgatagc |
179 |
Q |
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| T |
38691429 |
tctttaaatgggattgatatatacaataagatctcatgtatgcaaatgttgttaatatactaaccgaaaaattgatagc |
38691351 |
T |
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