View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17141_low_1 (Length: 604)
Name: NF17141_low_1
Description: NF17141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17141_low_1 |
 |  |
|
| [»] chr7 (3 HSPs) |
 |  |
|
| [»] chr4 (6 HSPs) |
 |  |
|
| [»] scaffold0006 (1 HSPs) |
 |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |
|
| [»] chr8 (4 HSPs) |
 |  |
|
| [»] chr3 (5 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 5 - 604
Target Start/End: Complemental strand, 8921694 - 8921066
Alignment:
| Q |
5 |
ctcttctcatgactgacaactttgaatcatcaccaagcttaattgattcacgaaaattgctcattaaaattaaacaaccattccttattggctatcatat |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8921694 |
ctcttctcatgactgacaactttgaatcatcaccaagcttaattgattcacgaaaattgctcatcaaaattaaacaaccattccttattggctatcatat |
8921595 |
T |
 |
| Q |
105 |
gattgttgcatcttgaatctaagaaccacacctcatcttttgcaccggtgttagtattttcttcccaaataggacactcattttgatagtg--------- |
195 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
8921594 |
gattgttgcatcctaaatctaagaaccacacctcatcttttgcaccggtgttagcattttcttcccaagtgggacacttattttgatagtgtcccaactt |
8921495 |
T |
 |
| Q |
196 |
---acacttatagtattccaccatctctttgctttgtcttcctcttccccttcccctt------------gctccatttcttcctctaccatgagtaaaa |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8921494 |
gtgacacttatagtattccaccatctctttgctttgtcttcatcttccccttccccttccccttccacttgctccatttcttcctctaccatgagtaaaa |
8921395 |
T |
 |
| Q |
281 |
ccaccatcttcagttcttcctcttcttgaatttgacaccttcaagagttgttcttcttcctttttcttgtgaagtgtcattcttgcttcttggacaagaa |
380 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
8921394 |
ccaccatctccagctcttcctcttcttgaatttgacaccttcaagagttgttcttcttcctttttcttgtgaagtgtcattcatgcttcttgaacaagaa |
8921295 |
T |
 |
| Q |
381 |
aattgctttgcagttcattaatggaaaaagtggtaacgtcattggattcttctatggagcaaaccacatagttgaatcttgaagtcatggacctaagaat |
480 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8921294 |
aattgctttgcagttcattaatggaaaaagcggtaacatcattggattcttctatggagcaaaccacatagttgaatcttgaagtcatggacctaagaat |
8921195 |
T |
 |
| Q |
481 |
cttctccaccatagttgtttttcctttctttctccatgtgcagacatcttgtttgcaattgctagggttcttgcaaaatactcatc-----agtcacttt |
575 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
8921194 |
cttctccaccatagttttttttcctttctttctccatgtgcatacatcttgtttgcaattgctagggttcttgcaaaatactcatccactgattcacttt |
8921095 |
T |
 |
| Q |
576 |
gaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
8921094 |
gaaagtgacagttaattagaaacaaaaaa |
8921066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 3177983 - 3177950
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
3177983 |
actttgaaagtgacagttaattagaaacaaaaaa |
3177950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 33071959 - 33071926
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
33071959 |
actttgaaagtgacagttaattagaaacaaaaaa |
33071926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 267 - 604
Target Start/End: Original strand, 7627363 - 7627700
Alignment:
| Q |
267 |
taccatgagtaaaaccaccatcttcagttcttcctcttcttgaatttgacaccttcaagagttgttcttcttcctttttcttgtgaagtgtcattcttgc |
366 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7627363 |
taccatgagtaaaaccaccatctccagttcttcctcttcttgaatttgacaccttcaagagttgttcttcttcctttttcttgtgaagtgtcattcttgc |
7627462 |
T |
 |
| Q |
367 |
ttcttggacaagaaaattgctttgcagttcattaatggaaaaagtggtaacgtcattggattcttctatggagcaaaccacatagttgaatcttgaagtc |
466 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7627463 |
ttcttgaacaagaaaattgctttgcagttcattaatggaaaaagtggtaaggtcattggattcttctatggagcaaaccacatagttgaatcttgaagtc |
7627562 |
T |
 |
| Q |
467 |
atggacctaagaatcttctccaccatagttgtttttcctttctttctccatgtgcagacatcttgtttgcaattgctagggttcttgcaaaatactcatc |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7627563 |
atggacctaagaatcttctccaccatagttgtttttcctttctttctccatgtgcagacatcttgtttgcaattgctagggttcttgcaaaatactcatc |
7627662 |
T |
 |
| Q |
567 |
agtcactttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7627663 |
agtcactttgaaagtgacagttaattagaaacaaaaaa |
7627700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 5 - 250
Target Start/End: Original strand, 7621900 - 7622157
Alignment:
| Q |
5 |
ctcttctcatgactgacaactttgaatcatcaccaagcttaattgattcacgaaaattgctcattaaaattaaacaaccattccttattggctatcatat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7621900 |
ctcttctcatgactgacaactttgaatcatcactaagcttaattgattcacgaaaattgctcatcaaaattaaacaaccattccttattggctatcatat |
7621999 |
T |
 |
| Q |
105 |
gattgttgcatcttgaatctaagaaccacacctcatcttttgcaccggtgttagtattttcttcccaaataggacactcattttgata------------ |
192 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |
|
|
| T |
7622000 |
gattgttgcatcctgaatctaagaaccacaccttatcttttgcaccggtgttagcattttcttcccaagtaggacacccattttgatagtgtcccaactt |
7622099 |
T |
 |
| Q |
193 |
gtgacacttatagtattccaccatctctttgctttgtcttcctcttccccttcccctt |
250 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
7622100 |
gtgacacttatagtactccaccatctcttttctttgtcttcctcttccccttcccctt |
7622157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 6150750 - 6150717
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
6150750 |
actttgaaagtgacagttaattagaaacaaaaaa |
6150717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 34603680 - 34603647
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
34603680 |
actttgaaagtgacagttaattagaaacaaaaaa |
34603647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 56499802 - 56499835
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
56499802 |
actttgaaagtgacagttaattagaaacaaaaaa |
56499835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 471
Target Start/End: Complemental strand, 11356846 - 11356770
Alignment:
| Q |
395 |
tcattaatggaaaaagtggtaacgtcattggattcttctatggagcaaaccacatagttgaatcttgaagtcatgga |
471 |
Q |
| |
|
|||| |||||| ||| | ||||| |||||||||||||||||| ||| |||| ||||| ||||||| | |||||||| |
|
|
| T |
11356846 |
tcatcaatggataaaattgtaacatcattggattcttctatgacgcacaccaaatagtcgaatctttatgtcatgga |
11356770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 357 - 486
Target Start/End: Original strand, 35372092 - 35372221
Alignment:
| Q |
357 |
tcattcttgcttcttggacaagaaaattgctttgcagttcattaatggaaaaagtggtaacgtcattggattcttctatggagcaaaccacatagttgaa |
456 |
Q |
| |
|
|||||||||||||||| ||||| || ||| ||||||||||| ||| |||| ||||||||| ||||| ||||||||||| | || |||||||||||||| |
|
|
| T |
35372092 |
tcattcttgcttcttgcacaagtaatctgcattgcagttcatcaatagaaagagtggtaacatcattagattcttctatagtacacaccacatagttgaa |
35372191 |
T |
 |
| Q |
457 |
tcttgaagtcatggacctaagaatcttctc |
486 |
Q |
| |
|
|||||| |||||||| |||| ||||||||| |
|
|
| T |
35372192 |
tcttgatgtcatggatctaaaaatcttctc |
35372221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 4440124 - 4440091
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
4440124 |
actttgaaagtgacagttaattagaaacaaaaaa |
4440091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 18393155 - 18393188
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
18393155 |
actttgaaagtgacagttaattagaaacaaaaaa |
18393188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 21150527 - 21150494
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
21150527 |
actttgaaagtgacagttaattagaaacaaaaaa |
21150494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 603
Target Start/End: Complemental strand, 21157668 - 21157636
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaa |
603 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
21157668 |
actttgaaagtgacagttaattagaaacaaaaa |
21157636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 486
Target Start/End: Original strand, 24659053 - 24659113
Alignment:
| Q |
426 |
attcttctatggagcaaaccacatagttgaatcttgaagtcatggacctaagaatcttctc |
486 |
Q |
| |
|
|||||||||| ||| | |||||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
24659053 |
attcttctatagagtagaccacatagttgaatcttgatgtcatggatatgagaatcttctc |
24659113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 19812009 - 19811976
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
19812009 |
actttgaaagtgacagttaattagaaacaaaaaa |
19811976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 471
Target Start/End: Original strand, 10784303 - 10784361
Alignment:
| Q |
413 |
gtaacgtcattggattcttctatggagcaaaccacatagttgaatcttgaagtcatgga |
471 |
Q |
| |
|
||||| ||||| |||||||| || |||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
10784303 |
gtaacatcatttgattcttcaattgagcaaacaacataattgaatcttgatgtcatgga |
10784361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 30544573 - 30544540
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
30544573 |
actttgaaagtgacagttaattagaaacaaaaaa |
30544540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 37660197 - 37660164
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
37660197 |
actttgaaagtgacagttaattagaaacaaaaaa |
37660164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 603
Target Start/End: Original strand, 18904101 - 18904133
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaa |
603 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
18904101 |
actttgaaagtgacagttaattagaaacaaaaa |
18904133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 96249 - 96282
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
96249 |
actttgaaagtgacagttaattagaaacaaaaaa |
96282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 252647 - 252614
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
252647 |
actttgaaagtgacagttaattagaaacaaaaaa |
252614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 11163319 - 11163286
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
11163319 |
actttgaaagtgacagttaattagaaacaaaaaa |
11163286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 13132303 - 13132336
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
13132303 |
actttgaaagtgacagttaattagaaacaaaaaa |
13132336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 38074329 - 38074296
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
38074329 |
actttgaaagtgacagttaattagaaacaaaaaa |
38074296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 41890575 - 41890542
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
41890575 |
actttgaaagtgacagttaattagaaacaaaaaa |
41890542 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 1201116 - 1201083
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
1201116 |
actttgaaagtgacagttaattagaaacaaaaaa |
1201083 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 2642763 - 2642730
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
2642763 |
actttgaaagtgacagttaattagaaacaaaaaa |
2642730 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 28226480 - 28226447
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
28226480 |
actttgaaagtgacagttaattagaaacaaaaaa |
28226447 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 604
Target Start/End: Complemental strand, 35077440 - 35077407
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaaa |
604 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
35077440 |
actttgaaagtgacagttaattagaaacaaaaaa |
35077407 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 571 - 603
Target Start/End: Complemental strand, 23771340 - 23771308
Alignment:
| Q |
571 |
actttgaatgtgacagttaattagaaacaaaaa |
603 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
23771340 |
actttgaaagtgacagttaattagaaacaaaaa |
23771308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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