View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17141_low_13 (Length: 225)

Name: NF17141_low_13
Description: NF17141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17141_low_13
NF17141_low_13
[»] chr4 (33 HSPs)
chr4 (14-208)||(37826569-37826763)
chr4 (64-195)||(7790381-7790512)
chr4 (77-197)||(7773467-7773587)
chr4 (65-132)||(48864399-48864466)
chr4 (78-192)||(7237386-7237500)
chr4 (77-195)||(7771696-7771814)
chr4 (64-197)||(45365849-45365982)
chr4 (77-197)||(7765941-7766061)
chr4 (80-132)||(48147358-48147410)
chr4 (64-132)||(49043797-49043865)
chr4 (77-132)||(49038520-49038575)
chr4 (77-194)||(48852989-48853100)
chr4 (64-141)||(45371703-45371780)
chr4 (77-141)||(7908657-7908721)
chr4 (77-147)||(7878732-7878802)
chr4 (87-190)||(48903264-48903364)
chr4 (77-197)||(7786763-7786883)
chr4 (64-132)||(45384521-45384589)
chr4 (64-132)||(48156058-48156126)
chr4 (77-197)||(48870859-48870979)
chr4 (77-197)||(48876163-48876283)
chr4 (77-197)||(48886545-48886665)
chr4 (61-129)||(50666682-50666750)
chr4 (77-132)||(7813841-7813896)
chr4 (77-132)||(7801001-7801056)
chr4 (77-132)||(49048197-49048252)
chr4 (159-197)||(7878045-7878083)
chr4 (86-132)||(50672862-50672908)
chr4 (87-141)||(48861643-48861697)
chr4 (18-132)||(50669446-50669560)
chr4 (84-125)||(48734174-48734215)
chr4 (82-122)||(48735058-48735098)
chr4 (165-197)||(50669384-50669416)
[»] chr5 (5 HSPs)
chr5 (14-130)||(42561912-42562028)
chr5 (77-192)||(9120067-9120182)
chr5 (92-190)||(179364-179462)
chr5 (81-132)||(29688493-29688544)
chr5 (78-132)||(29696600-29696654)
[»] chr3 (5 HSPs)
chr3 (64-197)||(47451529-47451662)
chr3 (78-194)||(11005571-11005681)
chr3 (78-194)||(11024146-11024256)
chr3 (78-132)||(11015134-11015188)
chr3 (154-194)||(11015204-11015244)
[»] chr8 (8 HSPs)
chr8 (78-202)||(12200636-12200760)
chr8 (78-202)||(12445064-12445188)
chr8 (80-197)||(4962161-4962281)
chr8 (78-197)||(12195623-12195742)
chr8 (78-197)||(12440051-12440170)
chr8 (86-132)||(4031577-4031623)
chr8 (61-132)||(15349247-15349318)
chr8 (83-140)||(41311005-41311062)
[»] chr6 (3 HSPs)
chr6 (80-132)||(21016185-21016237)
chr6 (89-129)||(14197337-14197377)
chr6 (85-133)||(21979278-21979326)
[»] chr1 (6 HSPs)
chr1 (77-141)||(24367520-24367584)
chr1 (77-130)||(24310582-24310635)
chr1 (14-127)||(24340780-24340893)
chr1 (14-127)||(24353145-24353258)
chr1 (77-130)||(24416144-24416197)
chr1 (77-127)||(24323139-24323189)
[»] chr7 (2 HSPs)
chr7 (77-132)||(48884188-48884243)
chr7 (79-140)||(30165853-30165914)


Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 37826569 - 37826763
Alignment:
Q  14 aatatcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37826569 aatatcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatccgaacaacaagagtcttagtccaagacgaatgcagtttgtat 37826668  T
Q  114 tctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaattctccaaatacccacaaaccaaaatatggagg 208  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37826669 tctttcatcacccgtaatttaagtgtatgattataactgcccatggcccatagactaagaaattctccaaatacccacaaaccaaaatatggagg 37826763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 7790512 - 7790381
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggccca 163  Q
    ||||||||  || ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||| |    || | || ||    
T  7790512 catcaatagaaagaacaagagttttagtccaagacgaatgcactttgtattctttcatcacccatatttcaattgtatcattatcataatccttagcgca 7790413  T
Q  164 tagactaagaaattctccaaatacccacaaac 195  Q
    || ||| |||||||||||||||||||||||||    
T  7790412 taaactgagaaattctccaaatacccacaaac 7790381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 7773467 - 7773587
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||  | |  || | ||||||| ||||||| ||    
T  7773467 aacaagagatttaatccaagacgaatgcactttgtattctttcatcacccatatttcaactgtatcattagcattatccttagcccatacactaagatat 7773566  T
Q  177 tctccaaatacccacaaacca 197  Q
    |||||||||||||||||||||    
T  7773567 tctccaaatacccacaaacca 7773587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 48864466 - 48864399
Alignment:
Q  65 atcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||| ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48864466 atcaataggaagaacaagaatcttagtccaagacgaatgcactttgtattctttcatcacccatattt 48864399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 7237386 - 7237500
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||  || ||||| ||||| |    ||   ||||||||||| |||||||    
T  7237386 acaagagttttagtccaaaacgaatgcattttgtattctttcatcacccatattacaattgtatcattatcataatcctgagcccatagactgagaaatt 7237485  T
Q  178 ctccaaatacccaca 192  Q
    |||||||||||||||    
T  7237486 ctccaaatacccaca 7237500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 7771814 - 7771696
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||  || ||||| ||||| |    || | || |||| ||| ||||||    
T  7771814 aacaagagttttagtccatgacgaatgcactttgtattctttcatcacccatattacaattgtatcattatcataatccttagcgcataaactgagaaat 7771715  T
Q  177 tctccaaatacccacaaac 195  Q
    |||||||||||||||||||    
T  7771714 tctccaaatacccacaaac 7771696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 45365849 - 45365982
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggccca 163  Q
    |||||||| ||| |||  ||||||| |||||||||||| ||| ||| |||||||||||||||||||||| || ||||| ||||| |    |||| |||||    
T  45365849 catcaataggaagaacgtgagtctttgtccaagacgaacgcactttatattctttcatcacccatatttcaactgtatcattatcataatccatagccca 45365948  T
Q  164 tagactaagaaattctccaaatacccacaaacca 197  Q
     | ||| | |||||||||||||||||||||||||    
T  45365949 aaaactgaaaaattctccaaatacccacaaacca 45365982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 7766061 - 7765941
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    |||||| ||||||||||| ||||||| || |||||||||||||||||||||||||| || ||||| ||||  | |  || |  |||||| ||| ||||||    
T  7766061 aacaagtgtcttagtccatgacgaatacactttgtattctttcatcacccatatttcaattgtatcattagtagtatccttaacccatatactgagaaat 7765962  T
Q  177 tctccaaatacccacaaacca 197  Q
    |||||| ||||||||||||||    
T  7765961 tctccagatacccacaaacca 7765941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 48147358 - 48147410
Alignment:
Q  80 aagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48147358 aagagtcttagtccaagacgaatgcactttgtattctttcatcacccatattt 48147410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 49043797 - 49043865
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||  || |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  49043797 catcaatagaaaaaacaagagtcttagtccatgacgaatgcactttgtattctttcatcacccatattt 49043865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 49038520 - 49038575
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  49038520 aacaagagtcttagtccaagacgaatgaactttgtattctttcatcacccatattt 49038575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 48853100 - 48852989
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| || ||||| ||        |||||| |||||| ||| ||||||    
T  48853100 aacaagagtcttagtccaagacgaacgcactttgtattctttcatgacccatatttcaactgtatcat------cccccatgacccatatacttagaaat 48853007  T
Q  177 tctccaaatacccacaaa 194  Q
    |||| |||||||||||||    
T  48853006 tctctaaatacccacaaa 48852989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 45371703 - 45371780
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtat 141  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||    
T  45371703 catcgataggaagaacaaaagtcttagtccaagacgaatgcactttgtattctttcataacccatatttcaactgtat 45371780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 7908721 - 7908657
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtat 141  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  7908721 aacaagagttttattccaagatgaatgcactttgtattctttcatcacccatatttcaagtgtat 7908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 7878802 - 7878732
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattat 147  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||| || ||||| |||||    
T  7878802 aacaagagttttaatccaagatgaatgcactttgtattctttcatcacccatatttcaactgtatcattat 7878732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 48903364 - 48903264
Alignment:
Q  87 ttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaattctccaaata 186  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| || | ||| ||  |||    |||  |||||||| |||||||||||||||||||    
T  48903364 ttagtccaagacaaatgcactttgtattctttcatcacccatatttcaaatttattatcgtaa---tccaaagcccataggctaagaaattctccaaata 48903268  T
Q  187 ccca 190  Q
    ||||    
T  48903267 ccca 48903264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 7786883 - 7786763
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||||||| |||||||  ||||||  ||||||||||||||||||||||||| || ||||| ||||  | |  || |  |||||| ||| ||||||    
T  7786883 aacaagagtcttattccaagataaatgcacgttgtattctttcatcacccatatttcaattgtatcattagtagtatccttaacccatatactgagaaat 7786784  T
Q  177 tctccaaatacccacaaacca 197  Q
    || ||| ||||||||||||||    
T  7786783 tccccagatacccacaaacca 7786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 45384521 - 45384589
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||| | ||| |||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  45384521 catcaaaaggaagaacacgagtctttgtccaagacgaatgcactttatattctttcatcacccatattt 45384589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 48156058 - 48156126
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||| |||  |||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  48156058 catcaataggaaggacaagagttttagtccaagaagaatgcactttgtattcgttcatcacccatattt 48156126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 48870979 - 48870859
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    |||||||||||| ||||||||||| | || ||||||||| ||||||||||| |||| || ||||| || || |    |||| ||  ||||||| ||||||    
T  48870979 aacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattgtattatcattataatccatagcatatagactgagaaat 48870880  T
Q  177 tctccaaatacccacaaacca 197  Q
    || ||||||||||||||||||    
T  48870879 tccccaaatacccacaaacca 48870859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 48876283 - 48876163
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    |||||||||||| ||||||||||| | || ||||||||| ||||||||||| |||| || ||||| || || |    |||| ||  ||||||| ||||||    
T  48876283 aacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattgtattatcattataatccatagcatatagactgagaaat 48876184  T
Q  177 tctccaaatacccacaaacca 197  Q
    || ||||||||||||||||||    
T  48876183 tccccaaatacccacaaacca 48876163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 48886665 - 48886545
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    |||||||||||| ||||||||||| | || ||||||||| ||||||||||| |||| || ||||| || || |    |||| ||  ||||||| ||||||    
T  48886665 aacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattgtattatcattataatccatagcatatagactgagaaat 48886566  T
Q  177 tctccaaatacccacaaacca 197  Q
    || ||||||||||||||||||    
T  48886565 tccccaaatacccacaaacca 48886545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 50666750 - 50666682
Alignment:
Q  61 catcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccata 129  Q
    ||||||||||  ||| ||||||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  50666750 catcatcaatgtgaataacaagagttttagtccaagatgaatgcactttgtattcttacatcacccata 50666682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 7813896 - 7813841
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||    
T  7813896 aacaagagttttattccaagacgaatgcactttgtattctttcaacacccatattt 7813841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 7801056 - 7801001
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||| ||| ||||||||||||||| |||||| ||||||| |||||||||||    
T  7801056 aacaagagttttattccaagacgaatgcactttgtaatctttcaacacccatattt 7801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 49048197 - 49048252
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||| |||||||||||| |||||||||| ||| || |||||||||||||||||||    
T  49048197 aacaaaagtcttagtccatgacgaatgcactttatactctttcatcacccatattt 49048252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 7878083 - 7878045
Alignment:
Q  159 gcccatagactaagaaattctccaaatacccacaaacca 197  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  7878083 gcccatagactgagaaattctccaaatacccacaaacca 7878045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 50672908 - 50672862
Alignment:
Q  86 cttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  50672908 cttagtccacgacgaatgcaatttgtattgtttcatcacccatattt 50672862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 48861697 - 48861643
Alignment:
Q  87 ttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtat 141  Q
    |||||||||||| |||||| |||||||||||| || |||||||||| || |||||    
T  48861697 ttagtccaagacaaatgcactttgtattcttttattacccatatttcaaatgtat 48861643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 50669560 - 50669446
Alignment:
Q  18 tcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctt 117  Q
    |||||| | |||||||| |||| |||| |||| || |||||| |  |||||||  | | || |||||||||||||||||| |||||||  ||| | ||||    
T  50669560 tcaccattctttgtagagcatataggggaaaatttaggaatgactgcatcaatctgtagaataagagtcttagtccaagatgaatgcaacttggaatctt 50669461  T
Q  118 tcatcacccatattt 132  Q
    |||||||||| ||||    
T  50669460 tcatcacccacattt 50669446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 48734215 - 48734174
Alignment:
Q  84 gtcttagtccaagacgaatgcagtttgtattctttcatcacc 125  Q
    ||||| |||||| ||||||||| |||||||||||||||||||    
T  48734215 gtctttgtccaatacgaatgcactttgtattctttcatcacc 48734174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 48735058 - 48735098
Alignment:
Q  82 gagtcttagtccaagacgaatgcagtttgtattctttcatc 122  Q
    |||| |||||||||||||||| || ||||||||||||||||    
T  48735058 gagttttagtccaagacgaattcactttgtattctttcatc 48735098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 50669416 - 50669384
Alignment:
Q  165 agactaagaaattctccaaatacccacaaacca 197  Q
    ||||| |||||||||||||||||||||||||||    
T  50669416 agactgagaaattctccaaatacccacaaacca 50669384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 42561912 - 42562028
Alignment:
Q  14 aatatcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtat 113  Q
    |||||||||| |||||||| |  ||| |||| |||| | ||||||| |||||| |||| ||| ||||||| ||||||||||||| ||||||| |||||||    
T  42561912 aatatcaccattttttgtataggataaagggcaaaagtagggaatgtcatcataaataggaagaacaagaatcttagtccaagatgaatgcactttgtat 42562011  T
Q  114 tctttcatcacccatat 130  Q
    |||||||||||||||||    
T  42562012 tctttcatcacccatat 42562028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 9120182 - 9120067
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||| ||  ||||||| ||||||| |||||||||||||||||||||||||| || ||||| ||||  |    |||| ||||||| ||| ||||||    
T  9120182 aacaagagttttcttccaagaggaatgcactttgtattctttcatcacccatatttcaactgtatcattagcaaaatccatagcccatatactgagaaat 9120083  T
Q  177 tctccaaatacccaca 192  Q
    ||||||||||||||||    
T  9120082 tctccaaatacccaca 9120067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 179462 - 179364
Alignment:
Q  92 ccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaattctccaaataccca 190  Q
    |||||| ||||||| |||||||||||||||||||||||||| || ||||| ||||| |    |||| ||||||| ||| ||||||| ||||||||||||    
T  179462 ccaagatgaatgcactttgtattctttcatcacccatatttcaactgtatcattatcataatccatagcccatatactgagaaattgtccaaataccca 179364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 29688544 - 29688493
Alignment:
Q  81 agagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||| ||||||||||| ||||  ||||||| |||||||||||||||||    
T  29688544 agagtctttgtccaagacgattgcacattgtattttttcatcacccatattt 29688493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 29696654 - 29696600
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||||||||||||||| || ||||  ||||||| || ||||||||||||||    
T  29696654 acaagagtcttagtccaagaggattgcacattgtatttttccatcacccatattt 29696600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 47451529 - 47451662
Alignment:
Q  64 catcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggccca 163  Q
    |||||||| ||| ||||||||||||   |||||||||||  | |||||||||||||||||||||||||| || | ||| ||||| ||   |||   |||     
T  47451529 catcaataggaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatttcaactatatcattatgacaatccagaaccct 47451628  T
Q  164 tagactaagaaattctccaaatacccacaaacca 197  Q
    ||||||||||||||||||||||||||||||||||    
T  47451629 tagactaagaaattctccaaatacccacaaacca 47451662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 11005571 - 11005681
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| || ||| | ||        ||||| |||||||||||||||||||    
T  11005571 acaagagccttagtccaagacgaatgcactttgtattctttcataacccatatttcaattgtttcat------cccccatagcccatagactaagaaatt 11005664  T
Q  178 ctccaaatacccacaaa 194  Q
    ||||||||| |||||||    
T  11005665 ctccaaatatccacaaa 11005681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 11024146 - 11024256
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||     |||  ||  ||||| ||||||||||| |||||||    
T  11024146 acaagagtcttagtccaagacgaatgcactttgtattctttcataacccatatttcaattg-----tta-caccccccatagcccatagactgagaaatt 11024239  T
Q  178 ctccaaatacccacaaa 194  Q
    ||||||||| |||||||    
T  11024240 ctccaaatatccacaaa 11024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 11015134 - 11015188
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||| |||  |||||||||||||| ||||||||||||||| ||||||||||    
T  11015134 acaagagttttaacccaagacgaatgcactttgtattctttcataacccatattt 11015188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 11015204 - 11015244
Alignment:
Q  154 ccatggcccatagactaagaaattctccaaatacccacaaa 194  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  11015204 ccatagcccatagacttagaaattctccaaatatccacaaa 11015244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 12200760 - 12200636
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    ||||||||||| |||||||||||| |||||||||||  ||||||| ||||||||| ||| || ||||||| |     |||   |||||||||||||||||    
T  12200760 acaagagtcttggtccaagacgaacgcagtttgtatattttcatcgcccatatttcaagcgtctgattatcaaaattcatattccatagactaagaaatt 12200661  T
Q  178 ctccaaatacccacaaaccaaaata 202  Q
    |||||||||||||||||||| ||||    
T  12200660 ctccaaatacccacaaaccataata 12200636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 12445188 - 12445064
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    ||||||||||| |||||||||||| |||||||||||  ||||||| ||||||||| ||| || ||||||| |     |||   |||||||||||||||||    
T  12445188 acaagagtcttggtccaagacgaacgcagtttgtatattttcatcgcccatatttcaagcgtctgattatcaaaattcatattccatagactaagaaatt 12445089  T
Q  178 ctccaaatacccacaaaccaaaata 202  Q
    |||||||||||||||||||| ||||    
T  12445088 ctccaaatacccacaaaccataata 12445064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 4962161 - 4962281
Alignment:
Q  80 aagagtcttagtccaagacg---aatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaat 176  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||||||||||||| || | ||  |||   |    ||||| |||||||||| ||||||    
T  4962161 aagagtcttagtccacgacgacgaatgcagtttgtattctttcatcacccatatttcaactctacaattgcgataatccatgccccatagactgagaaat 4962260  T
Q  177 tctccaaatacccacaaacca 197  Q
    |||||||||||||||||||||    
T  4962261 tctccaaatacccacaaacca 4962281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 12195742 - 12195623
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    |||||||||||||||||||| || ||  ||||||||||||||||| ||||||||| || |||  |||||| |     |||   ||||||||| |||||||    
T  12195742 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaactgtccgattatcaaaattcatattccatagactgagaaatt 12195643  T
Q  178 ctccaaatacccacaaacca 197  Q
     |||||||||||||||||||    
T  12195642 ttccaaatacccacaaacca 12195623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 12440170 - 12440051
Alignment:
Q  78 acaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtatgattataactgcccatggcccatagactaagaaatt 177  Q
    |||||||||||||||||||| || ||  ||||||||||||||||| ||||||||| || |||  |||||| |     |||   ||||||||| |||||||    
T  12440170 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaactgtccgattatcaaaattcatattccatagactgagaaatt 12440071  T
Q  178 ctccaaatacccacaaacca 197  Q
     |||||||||||||||||||    
T  12440070 ttccaaatacccacaaacca 12440051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 4031577 - 4031623
Alignment:
Q  86 cttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  4031577 cttagtccaagacgaatgcattttgtattctttcataacccatattt 4031623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 15349318 - 15349247
Alignment:
Q  61 catcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||||||  || ||||||| |||| |||||||| || | || ||||||||||||||||||||||||||    
T  15349318 catcatcaatattaagaacaagaatctttgtccaagaagagttcactttgtattctttcatcacccatattt 15349247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 41311005 - 41311062
Alignment:
Q  83 agtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgta 140  Q
    ||||||||||||||| ||||| | |  |||||||| |||||||||||| |||||||||    
T  41311005 agtcttagtccaagatgaatgtattgcgtattcttgcatcacccatatcttaagtgta 41311062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 21016237 - 21016185
Alignment:
Q  80 aagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  21016237 aagagtcttagtccaagacgaatgtactttgtattctttcataacccatattt 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 14197337 - 14197377
Alignment:
Q  89 agtccaagacgaatgcagtttgtattctttcatcacccata 129  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  14197337 agtccaagatgaatgcattttgtattctttcatcacccata 14197377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 21979278 - 21979326
Alignment:
Q  85 tcttagtccaagacgaatgcagtttgtattctttcatcacccatatttt 133  Q
    ||||| ||||||| ||| ||| |||||||||||||||||||||||||||    
T  21979278 tcttattccaagaggaacgcactttgtattctttcatcacccatatttt 21979326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 24367584 - 24367520
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgtat 141  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||| | ||||||||    
T  24367584 aacaagagttttagtccaagacgaatgcactttgtattcttccattacccatatataaagtgtat 24367520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 24310635 - 24310582
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatat 130  Q
    ||||||||| ||| ||||||| || |||| ||||||||||||||||||||||||    
T  24310635 aacaagagttttactccaagaagactgcactttgtattctttcatcacccatat 24310582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 24340893 - 24340780
Alignment:
Q  14 aatatcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtat 113  Q
    ||||||||||||| ||||| |||||| | || ||| |||  |||||| ||||| | ||  || ||||||||| ||||||||||| || |||| ||| |||    
T  24340893 aatatcaccacttgttgtacaacatacaagggaaacattatgaatggtatcataagtagtaagaacaagagttttagtccaagatgactgcactttatat 24340794  T
Q  114 tctttcatcaccca 127  Q
    |||||||| |||||    
T  24340793 tctttcattaccca 24340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 24353258 - 24353145
Alignment:
Q  14 aatatcaccactttttgtagaacatagagggtaaaaattgggaatggcatcatcaatacgaacaacaagagtcttagtccaagacgaatgcagtttgtat 113  Q
    ||||||||||||| ||||| |||||| | || ||| |||  |||||| ||||| | ||  || ||||||||| ||||||||||| || |||| ||| |||    
T  24353258 aatatcaccacttgttgtacaacatacaagggaaacattatgaatggtatcataagtagtaagaacaagagttttagtccaagatgactgcactttatat 24353159  T
Q  114 tctttcatcaccca 127  Q
    |||||||| |||||    
T  24353158 tctttcattaccca 24353145  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 24416197 - 24416144
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatat 130  Q
    ||||||||| ||||||||||| || |||  ||||||||||||||||||||||||    
T  24416197 aacaagagttttagtccaagatgactgccctttgtattctttcatcacccatat 24416144  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 24323189 - 24323139
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcaccca 127  Q
    ||||||||| |||||| |||| || |||| |||||||||||||||||||||    
T  24323189 aacaagagttttagtcgaagatgactgcactttgtattctttcatcaccca 24323139  T

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Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 48884243 - 48884188
Alignment:
Q  77 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattt 132  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  48884243 aacaagagtcttagtccaagacatatgcactttgtattctttcatcacctatattt 48884188  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 30165914 - 30165853
Alignment:
Q  79 caagagtcttagtccaagacgaatgcagtttgtattctttcatcacccatattttaagtgta 140  Q
    |||||||| |||||||||| ||||||| |  |||||||| |||||||||||| |||| ||||    
T  30165914 caagagtcgtagtccaagatgaatgcactgcgtattcttgcatcacccatatcttaactgta 30165853  T

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