View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17143_high_3 (Length: 582)

Name: NF17143_high_3
Description: NF17143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17143_high_3
NF17143_high_3
[»] chr1 (26 HSPs)
chr1 (1-568)||(26581588-26582160)
chr1 (338-442)||(30639201-30639305)
chr1 (35-82)||(15158789-15158836)
chr1 (33-82)||(21663091-21663140)
chr1 (1-82)||(24464628-24464710)
chr1 (254-381)||(40340621-40340749)
chr1 (33-68)||(16180764-16180799)
chr1 (1-82)||(27912078-27912160)
chr1 (41-82)||(9403679-9403720)
chr1 (41-82)||(12210320-12210361)
chr1 (1-82)||(26652590-26652670)
chr1 (34-79)||(28009794-28009839)
chr1 (41-82)||(44797173-44797214)
chr1 (35-82)||(11845222-11845269)
chr1 (43-82)||(14782587-14782626)
chr1 (35-82)||(18827445-18827492)
chr1 (43-82)||(26611332-26611371)
chr1 (40-82)||(18734586-18734628)
chr1 (40-82)||(22426516-22426558)
chr1 (40-82)||(22624670-22624712)
chr1 (40-82)||(25402436-25402478)
chr1 (33-82)||(729183-729232)
chr1 (33-82)||(15542309-15542358)
chr1 (41-82)||(26647358-26647399)
chr1 (46-82)||(23034932-23034968)
chr1 (41-81)||(26022440-26022480)
[»] chr7 (29 HSPs)
chr7 (1-82)||(10414280-10414361)
chr7 (35-82)||(23173686-23173733)
chr7 (1-82)||(1810918-1811000)
chr7 (40-82)||(2927928-2927970)
chr7 (33-82)||(3585523-3585572)
chr7 (33-74)||(5236875-5236916)
chr7 (33-82)||(10332451-10332500)
chr7 (1-82)||(17887731-17887812)
chr7 (33-82)||(19154865-19154914)
chr7 (33-82)||(20754264-20754313)
chr7 (33-82)||(26249076-26249125)
chr7 (40-75)||(16055264-16055299)
chr7 (35-82)||(19201323-19201370)
chr7 (340-383)||(24454481-24454524)
chr7 (33-82)||(9078882-9078932)
chr7 (40-82)||(13252708-13252750)
chr7 (40-82)||(17189711-17189753)
chr7 (1-73)||(24751208-24751282)
chr7 (41-82)||(1767431-1767472)
chr7 (41-82)||(2506821-2506862)
chr7 (33-82)||(2565953-2566002)
chr7 (33-82)||(3173757-3173806)
chr7 (33-82)||(4450718-4450767)
chr7 (33-74)||(6039306-6039347)
chr7 (33-82)||(9767832-9767881)
chr7 (33-82)||(13280806-13280855)
chr7 (33-82)||(19201505-19201554)
chr7 (41-82)||(23897295-23897336)
chr7 (1-73)||(2505858-2505930)
[»] chr5 (24 HSPs)
chr5 (260-406)||(28430153-28430299)
chr5 (31-82)||(23214826-23214877)
chr5 (31-80)||(24162014-24162063)
chr5 (4-82)||(17831711-17831789)
chr5 (33-82)||(19053148-19053197)
chr5 (33-82)||(25400739-25400788)
chr5 (18-82)||(32415831-32415895)
chr5 (275-483)||(39687258-39687465)
chr5 (35-82)||(29988006-29988053)
chr5 (35-82)||(34488906-34488953)
chr5 (31-81)||(18832267-18832317)
chr5 (40-82)||(19006849-19006891)
chr5 (40-82)||(20548454-20548496)
chr5 (40-82)||(21352969-21353011)
chr5 (41-82)||(18939575-18939616)
chr5 (33-82)||(19003766-19003815)
chr5 (33-82)||(19761582-19761631)
chr5 (33-82)||(23266863-23266912)
chr5 (33-82)||(23338938-23338987)
chr5 (41-78)||(24513201-24513238)
chr5 (36-81)||(26348492-26348537)
chr5 (1-82)||(29989003-29989084)
chr5 (33-74)||(34132133-34132174)
chr5 (41-81)||(24263752-24263792)
[»] chr8 (26 HSPs)
chr8 (1-82)||(18836807-18836888)
chr8 (33-82)||(25227306-25227355)
chr8 (1-82)||(17649975-17650057)
chr8 (33-82)||(28621651-28621700)
chr8 (1-81)||(17976246-17976326)
chr8 (1-82)||(13833604-13833686)
chr8 (40-82)||(19265876-19265918)
chr8 (41-82)||(17510959-17511000)
chr8 (33-82)||(20400381-20400430)
chr8 (31-82)||(13313272-13313323)
chr8 (43-82)||(14271898-14271937)
chr8 (43-82)||(21316840-21316879)
chr8 (37-79)||(24105520-24105562)
chr8 (33-63)||(24520022-24520052)
chr8 (35-81)||(24583173-24583219)
chr8 (33-82)||(29765392-29765442)
chr8 (33-82)||(5151966-5152015)
chr8 (33-82)||(17100207-17100256)
chr8 (33-82)||(19705033-19705082)
chr8 (41-82)||(21695414-21695455)
chr8 (35-68)||(24090893-24090926)
chr8 (33-82)||(24389803-24389852)
chr8 (45-82)||(29380961-29380998)
chr8 (42-82)||(6886726-6886766)
chr8 (41-81)||(26829468-26829508)
chr8 (46-82)||(28858895-28858931)
[»] chr3 (22 HSPs)
chr3 (1-82)||(26092920-26093001)
chr3 (1-82)||(7805756-7805838)
chr3 (2-82)||(20886883-20886964)
chr3 (1-88)||(819841-819929)
chr3 (1-68)||(25530746-25530813)
chr3 (43-80)||(8145305-8145342)
chr3 (33-82)||(12517337-12517386)
chr3 (33-82)||(19912627-19912676)
chr3 (33-82)||(22470403-22470452)
chr3 (33-82)||(34276438-34276487)
chr3 (35-79)||(25850952-25850996)
chr3 (1-68)||(5270821-5270888)
chr3 (33-76)||(12771209-12771252)
chr3 (24-82)||(1096762-1096819)
chr3 (40-82)||(16228345-16228387)
chr3 (41-82)||(15669339-15669380)
chr3 (33-82)||(18457112-18457161)
chr3 (41-82)||(18535825-18535866)
chr3 (33-82)||(52935534-52935583)
chr3 (31-63)||(8765719-8765751)
chr3 (31-63)||(8770609-8770641)
chr3 (1-76)||(22450463-22450539)
[»] chr2 (17 HSPs)
chr2 (1-82)||(16157085-16157167)
chr2 (2-82)||(34369340-34369419)
chr2 (349-403)||(32688250-32688304)
chr2 (40-82)||(25537610-25537652)
chr2 (24-82)||(27907523-27907581)
chr2 (1-82)||(32130700-32130782)
chr2 (34-82)||(21905774-21905822)
chr2 (31-83)||(29892235-29892287)
chr2 (31-74)||(23010052-23010095)
chr2 (40-82)||(18120546-18120588)
chr2 (1-82)||(32137913-32137995)
chr2 (33-82)||(17351025-17351074)
chr2 (33-82)||(17891778-17891827)
chr2 (45-82)||(26313237-26313274)
chr2 (33-82)||(28918235-28918284)
chr2 (45-82)||(29144694-29144731)
chr2 (33-82)||(35680101-35680150)
[»] chr4 (19 HSPs)
chr4 (2-68)||(10108258-10108324)
chr4 (33-82)||(15166515-15166564)
chr4 (320-464)||(22269135-22269279)
chr4 (33-82)||(17711353-17711402)
chr4 (33-82)||(22171795-22171844)
chr4 (1-82)||(25117867-25117948)
chr4 (35-82)||(25025155-25025202)
chr4 (33-82)||(18750871-18750920)
chr4 (35-82)||(8968072-8968119)
chr4 (35-82)||(9849708-9849755)
chr4 (31-82)||(19556542-19556592)
chr4 (33-83)||(9536755-9536805)
chr4 (40-82)||(11252130-11252172)
chr4 (24-82)||(17335356-17335414)
chr4 (40-82)||(22350241-22350283)
chr4 (41-82)||(17218583-17218624)
chr4 (41-82)||(17277900-17277941)
chr4 (33-82)||(17434481-17434530)
chr4 (1-73)||(20316182-20316254)
[»] chr6 (19 HSPs)
chr6 (33-82)||(17384070-17384119)
chr6 (33-82)||(14076443-14076492)
chr6 (33-82)||(14641679-14641728)
chr6 (33-81)||(26820907-26820955)
chr6 (35-82)||(1636682-1636729)
chr6 (35-82)||(14078087-14078134)
chr6 (1-68)||(34395374-34395440)
chr6 (40-82)||(18171254-18171296)
chr6 (1-68)||(3358156-3358224)
chr6 (343-378)||(33754873-33754908)
chr6 (31-73)||(14723729-14723771)
chr6 (40-81)||(11136972-11137013)
chr6 (31-79)||(17822027-17822076)
chr6 (41-82)||(21687130-21687171)
chr6 (35-76)||(22564556-22564597)
chr6 (33-82)||(22845852-22845901)
chr6 (41-82)||(31878849-31878890)
chr6 (35-87)||(14727183-14727235)
chr6 (33-81)||(23087109-23087157)
[»] scaffold0019 (2 HSPs)
scaffold0019 (2-63)||(35193-35255)
scaffold0019 (1-63)||(24816-24879)
[»] scaffold0555 (1 HSPs)
scaffold0555 (31-82)||(6498-6549)
[»] scaffold0871 (1 HSPs)
scaffold0871 (32-82)||(4004-4054)
[»] scaffold0032 (1 HSPs)
scaffold0032 (35-82)||(92829-92876)
[»] scaffold0014 (1 HSPs)
scaffold0014 (31-82)||(192167-192218)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-82)||(38305-38387)
[»] scaffold0043 (1 HSPs)
scaffold0043 (33-82)||(88437-88486)
[»] scaffold0386 (1 HSPs)
scaffold0386 (41-81)||(4874-4914)
[»] scaffold0024 (1 HSPs)
scaffold0024 (35-63)||(41388-41416)


Alignment Details
Target: chr1 (Bit Score: 461; Significance: 0; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 1 - 568
Target Start/End: Original strand, 26581588 - 26582160
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatcgcttatattcatgtatta 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||    
T  26581588 ctaatactcctccattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaagatgatcaatcatcacttatattcatgtatta 26581687  T
Q  101 cannnnnnnnatgtttgcgtttatgtttagtgatcctatgtagaggttcttctttgtaattacttgagctatataattcgttgagtatctttgaacacaa 200  Q
    ||        ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26581688 cattttttttatgtttgtgtttatgtttagtgatcctatgtagaggttcttctttgtaattacttgagctatataatccgttgagtatctttgaacacaa 26581787  T
Q  201 gagagttgattgattttattcaattaaaattttctcttgatgcttcttctccttttacaaatattcatatatcaatctaggttttgaatgactattaacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  26581788 gagagttgattgattttattcaattaaaattttctcttgatgcttcttctccttttataaatattcataaatcaatctaggttttgaatgactattaacc 26581887  T
Q  301 ctaactcttagaagttggtctaataataactattcaatatgtaatagctttagacatattatattaccacctttgtgacaataattttgacgtgcaacca 400  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26581888 ctaacttttagaagttggtctaatagtaactattcaatatgtaatagctttagacatattatattaccacctttgtggcaataattttgacgtgcaacca 26581987  T
Q  401 aaccttcaatgtttacgaactcatctaagacattggggggttatgatcagtgaagatggttatggtccaagacaatgttcataattttgttagaatttcg 500  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26581988 aaccttcaatgtttacgaactcacctaagatattggggggttatgatcagtgaagatggttatggtccaagacaatgttcataattttgttagaatttcg 26582087  T
Q  501 tgaaactaaataggcaattgtaggctct-----cggttaccaattggcaaaagagaagggaatccagtataat 568  Q
    ||||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||| |||||    
T  26582088 tgaaactaaataggcaattgtaggctctcgacacggttaccaattagcaaaagagaagggaatccagcataat 26582160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 30639305 - 30639201
Alignment:
Q  338 tatgtaatagctttagacatattatattaccacctttgtgacaataattttgacgtgcaaccaaaccttcaatgtttacgaactcatctaagacattggg 437  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||| |  |||| |||||||||  ||| ||| | ||||| |||||||| | ||    
T  30639305 tatgtaatagctttagacatattctattaccgcctttgtgacaatagttttaatatgcacccaaacctttgatggttatggactcacctaagacacttgg 30639206  T
Q  438 gggtt 442  Q
    |||||    
T  30639205 gggtt 30639201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 15158836 - 15158789
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  15158836 aaaataactgaaaaacatgctaagaataacgtaatttgacctgtcatc 15158789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 21663140 - 21663091
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  21663140 tgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatc 21663091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24464628 - 24464710
Alignment:
Q  1 ctaatactcctctattatggatgaaaa--ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| | ||||||||  ||| ||| |||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  24464628 ctaatactcctctattctagatgaaaaacctg-ttggaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 24464710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 381
Target Start/End: Original strand, 40340621 - 40340749
Alignment:
Q  254 tttacaaatattcatatatcaatctaggttttgaatgactattaaccctaactctt-agaagttggtctaataataactattcaatatgtaatagcttta 352  Q
    ||||| ||| || ||| ||||||| ||||  ||||||||||||||| |||||| || |||  ||| | ||||| ||| | ||  ||||||||||||||||    
T  40340621 tttacgaatgtttataaatcaatcgaggtcgtgaatgactattaactctaacttttgagactttgatataatattaattgtttgatatgtaatagcttta 40340720  T
Q  353 gacatattatattaccacctttgtgacaa 381  Q
     | |||||||| |||||||||||||||||    
T  40340721 aaaatattatactaccacctttgtgacaa 40340749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 16180764 - 16180799
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  16180764 tgaaaataactgaaaaacatgctaagaataatgtaa 16180799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27912078 - 27912160
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaa-taactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| ||||| |||||| | | |||| | ||||||||||||| ||||||||| |||| ||||| |||||||    
T  27912078 ctaatactcctctattttggattaaaactaaataaaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatc 27912160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 9403679 - 9403720
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  9403679 actgaaaaacatgctaagaataatgtaagatgatctgtcatc 9403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 12210320 - 12210361
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  12210320 actgaaaaacatgctaagaataatgtaagatgacctatcatc 12210361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26652590 - 26652670
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||| ||| ||| || | | ||||||||||||||||||||||| ||||| |||  ||||| |||||||    
T  26652590 ctaatactcctctattatagattaaacct-actaaaaataactgaaaaacatgctaaaaataacgtaggatgacatgtcatc 26652670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 28009794 - 28009839
Alignment:
Q  34 gaaaataactgaaaaacatgctaagaataatgtaatatgacctgtc 79  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||    
T  28009794 gaaaatgactgaaaaacatgctaagaataatgtaagatgacatgtc 28009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 44797173 - 44797214
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  44797173 actgaaaaacatgctaagaataatgtaagatgatctgtcatc 44797214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 11845269 - 11845222
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||||||    
T  11845269 aaaataactgaaaaatatgctaagaataacgtaagatgatctgtcatc 11845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 14782587 - 14782626
Alignment:
Q  43 tgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  14782587 tgaaaaacatgctaagaataacgtaagatgacctgtcatc 14782626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 18827445 - 18827492
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||| ||||||||| |||| |||||| ||||||    
T  18827445 aaaataactgaaaaacatgttaagaataacgtaagatgaccagtcatc 18827492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 26611371 - 26611332
Alignment:
Q  43 tgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  26611371 tgaaaaacatgctaagaataacgtaagatgacctgtcatc 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 18734628 - 18734586
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| || ||||||||||    
T  18734628 aactgaaaaacatgctaagaataacgtaagataacctgtcatc 18734586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 22426558 - 22426516
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  22426558 aactgaaaaacatgctaagaatgacgtaagatgacctgtcatc 22426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 22624670 - 22624712
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||| |||||||||||||||||||||||| ||||| |||||||    
T  22624670 aacttaaaaacatgctaagaataatgtaagatgacatgtcatc 22624712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 25402478 - 25402436
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| | || |||||||||||||    
T  25402478 aactgaaaaacatgctaagaataacgcaagatgacctgtcatc 25402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 729183 - 729232
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||| |||||    
T  729183 tgaaaatgactgaaaagcatgctaagaataacgtaagatgacctttcatc 729232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 15542358 - 15542309
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||| |||||||    
T  15542358 tgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatc 15542309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 26647399 - 26647358
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| ||||||||||||| |||| |||||||||||||    
T  26647399 actgaaaaatatgctaagaataacgtaagatgacctgtcatc 26647358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 23034968 - 23034932
Alignment:
Q  46 aaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||| || |||||||||||||    
T  23034968 aaaacatgctaagaataatgcaagatgacctgtcatc 23034932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 26022440 - 26022480
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  26022440 actgaaaaacatgctaagaataacgtaagatcacctgtcat 26022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10414361 - 10414280
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||| |||| | |||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  10414361 ctaatactcctttattcttgatgaaaactaactgaaaataaccgaaaaacatgctaagaataatgtaagatgacctgtcatc 10414280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 23173733 - 23173686
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  23173733 aaaataactgaaaaacatgctaagaataacgtaagatgacatgtcatc 23173686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1810918 - 1811000
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||||| |||||| |||||| | | ||||| |||||||||||||||| |||||| |||| ||||| |||||||    
T  1810918 ctaatactcatctattctggatgtaaaacttacttaaaatgactgaaaaacatgctacgaataacgtaagatgacatgtcatc 1811000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 2927928 - 2927970
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  2927928 aactgaaaaacatgctaagaataacgtaagatgacctgtcatc 2927970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 3585572 - 3585523
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| | |||||||||||||||||||||||||| ||||| |||||||    
T  3585572 tgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatc 3585523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 5236916 - 5236875
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgac 74  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  5236916 tgaaaataactgaaaaacatgctaagaataacgtaagatgac 5236875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 10332451 - 10332500
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  10332451 tgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 10332500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17887812 - 17887731
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||| ||||||||||  ||||| |||||| | | ||||| ||||||||| ||||||||||||| |||  |||||||||||||    
T  17887812 ctaaaactcctctatcttggatcaaaactaactaaaaatgactgaaaaatatgctaagaataacgtaggatgacctgtcatc 17887731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 19154865 - 19154914
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| | |||||||||||||||||||||| |||| |||||||||||||    
T  19154865 tgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatc 19154914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 20754264 - 20754313
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| | |||||||||||||||||||||| |||| |||||||||||||    
T  20754264 tgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatc 20754313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 26249125 - 26249076
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  26249125 tgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatc 26249076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 16055299 - 16055264
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacc 75  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16055299 aactgaaaaacatgctaagaataatgtaagatgacc 16055264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 19201370 - 19201323
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||||||||||||||||||||||| |||| |||| ||||||||    
T  19201370 aaaattactgaaaaacatgctaagaataacgtaagatgatctgtcatc 19201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 24454524 - 24454481
Alignment:
Q  340 tgtaatagctttagacatattatattaccacctttgtgacaata 383  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||    
T  24454524 tgtaatagctttagacatattctattaccgcttttgtgacaata 24454481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 9078932 - 9078882
Alignment:
Q  33 tgaaaataactgaaaaa-catgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||| |||||||||||||| |||| ||||| |||||||    
T  9078932 tgaaaataactgaaaaaacatgctaagaataacgtaagatgacatgtcatc 9078882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 13252750 - 13252708
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  13252750 aactgaaaaacatgctaagaataacgtaagatgacctgccatc 13252708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 17189753 - 17189711
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||| |||||||||||||||||||||||| ||||| |||||||    
T  17189753 aactaaaaaacatgctaagaataatgtaagatgacatgtcatc 17189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24751282 - 24751208
Alignment:
Q  1 ctaatactcctctattatggatgaaaa-ctgattgaaaataactgaaaaa-catgctaagaataatgtaatatga 73  Q
    ||||||||||||||||  ||||||||| || |||||||||  || ||||| ||||||||||||||||||| ||||    
T  24751282 ctaatactcctctattcgggatgaaaaactaattgaaaatggctaaaaaaacatgctaagaataatgtaagatga 24751208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 1767431 - 1767472
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| ||||||||||||| |||| |||||||||||||    
T  1767431 actgaaaaatatgctaagaataacgtaagatgacctgtcatc 1767472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 2506862 - 2506821
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||| ||||||| |||| |||||||||||||    
T  2506862 actgaaaaacatgctgagaataacgtaagatgacctgtcatc 2506821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 2565953 - 2566002
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||  |||| ||||| |||||||    
T  2565953 tgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatc 2566002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 3173757 - 3173806
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| | || |||| ||||||||    
T  3173757 tgaaaatgactgaaaaacatgctaagaataacgcaagatgatctgtcatc 3173806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 4450718 - 4450767
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||| |||||||||||||||||| |||| |||| ||||||||    
T  4450718 tgaaaatgactggaaaacatgctaagaataacgtaagatgatctgtcatc 4450767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 6039347 - 6039306
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgac 74  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  6039347 tgaaaatgactgaaaaacatgttaagaataatgtaagatgac 6039306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 9767832 - 9767881
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||  |||||||||||||||||||||| || | |||||||||||||    
T  9767832 tgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcatc 9767881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 13280806 - 13280855
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||| ||||||||||||||||||||| |||| ||||| |||||||    
T  13280806 tgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcatc 13280855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 19201505 - 19201554
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||| |||||||||| |||||||||  ||| |||||||||||||    
T  19201505 tgaaaataacagaaaaacatgttaagaataacataagatgacctgtcatc 19201554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 23897295 - 23897336
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||| |||||||||||||| ||||| |||||||    
T  23897295 actgaaaaacatgttaagaataatgtaagatgacatgtcatc 23897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2505858 - 2505930
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatga 73  Q
    |||| ||||||||||| |||||  ||||| | | ||||| ||||||||| ||||||||||||| |||| ||||    
T  2505858 ctaaaactcctctattttggatcgaaactaaataaaaatgactgaaaaatatgctaagaataacgtaagatga 2505930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 406
Target Start/End: Complemental strand, 28430299 - 28430153
Alignment:
Q  260 aatattcatatatcaatctaggttttgaatgactattaaccctaactcttagaagttggtctaataataactattcaatatgtaatagctttagacatat 359  Q
    |||||||||| ||| |||||||  |||||||||||||||||||   | || | | |||| |||||| ||| |||||||||||||||||||||| |||| |    
T  28430299 aatattcataaatcgatctaggccttgaatgactattaacccttgattttgggacttggcctaatattaattattcaatatgtaatagctttaaacatgt 28430200  T
Q  360 tatattaccacctttgtgacaataattttgacgtgcaaccaaacctt 406  Q
    | |||||||||||||||| ||| | |||| ||  |||| ||||||||    
T  28430199 tctattaccacctttgtggcaagagttttaacacgcaatcaaacctt 28430153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 23214877 - 23214826
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  23214877 attgaaaataactgaaaaacatgctaagaataacgtaagatgacctgtcatc 23214826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 24162063 - 24162014
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtca 80  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  24162063 attgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctgtca 24162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 17831711 - 17831789
Alignment:
Q  4 atactcctctattatggatgaaaa-ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||| ||||||||||||||| || | |||||||  |||||||||||||||||||||| |||| ||||| |||||||    
T  17831711 atactcctatattatggatgaaaaactaactgaaaatg-ctgaaaaacatgctaagaataacgtaagatgacatgtcatc 17831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 19053148 - 19053197
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| |||||||    
T  19053148 tgaaaataactgataaacatgctaagaataacgtaaaatgacatgtcatc 19053197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 25400788 - 25400739
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||| |||||    
T  25400788 tgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctctcatc 25400739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32415895 - 32415831
Alignment:
Q  18 tggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||| |||| | ||||| ||||||||| |||||||||||||||||| ||||| |||||||    
T  32415895 tggataaaagctgaataaaaattactgaaaaatatgctaagaataatgtaagatgacatgtcatc 32415831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 483
Target Start/End: Complemental strand, 39687465 - 39687258
Alignment:
Q  275 atctaggttttgaatgactattaaccctaactcttagaagttggtctaataataactattcaatatgtaatagctttagacatattatattaccaccttt 374  Q
    |||||| ||||||||||||||||| ||||  | ||  || |||   ||||| ||| | |||||| | || |||||||| | ||||| ||||| ||  |||    
T  39687465 atctagattttgaatgactattaatcctagtttttgaaacttgacttaatattaattgttcaatctctattagctttataaatattctattatcatattt 39687366  T
Q  375 gtgacaataattttgacgtgcaaccaaaccttcaatgtttacgaactcatctaagacattggggggttatgatcagtgaagatggttatggtccaagaca 474  Q
     |||||||  |||| | |||||| |||||||| |||| ||||||| ||| | ||||| || ||||||| | || ||||||||  ||||||||||||||||    
T  39687365 ctgacaatt-ttttaatgtgcaatcaaacctttaatgattacgaaatcaccaaagactttagggggttgtaattagtgaagagagttatggtccaagaca 39687267  T
Q  475 atgttcata 483  Q
     || |||||    
T  39687266 ttggtcata 39687258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 29988006 - 29988053
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  29988006 aaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatc 29988053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 34488906 - 34488953
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||||||||||||||||||||||| |||| |||||||| ||||    
T  34488906 aaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatc 34488953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 18832267 - 18832317
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||  ||||||||||||||||| |||||||||| ||||||| ||||    
T  18832267 attgaaaaagactgaaaaacatgctaaaaataatgtaagatgacctatcat 18832317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 19006891 - 19006849
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  19006891 aactgaaaaacatactaagaataatgtaagatgatctgtcatc 19006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 20548496 - 20548454
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||| |||||| |||| |||||||||||||    
T  20548496 aactgaaaaacatgctaggaataacgtaagatgacctgtcatc 20548454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 21352969 - 21353011
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  21352969 aactgaaaaacatgctaagaataacataagatgacctgtcatc 21353011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 18939575 - 18939616
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||| ||||||||| |||| |||||||||||||    
T  18939575 actgaaaaacatgttaagaataacgtaagatgacctgtcatc 18939616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 19003815 - 19003766
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||| |||||||| |||| || || |||||||    
T  19003815 tgaaaataactgaaaaacatgccaagaataacgtaagatcacatgtcatc 19003766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 19761631 - 19761582
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||| |||||||||| ||||| |||| |||||||||||||    
T  19761631 tgaaaatgactgaataacatgctaataataacgtaagatgacctgtcatc 19761582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 23266863 - 23266912
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||| |||||||||| || |||||||||| |||||||||||||    
T  23266863 tgaaaatgactaaaaaacatgccaaaaataatgtaagatgacctgtcatc 23266912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 23338938 - 23338987
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| | |||||||||||||||||||||  ||| |||||||||||||    
T  23338938 tgaaaatgattgaaaaacatgctaagaataacctaagatgacctgtcatc 23338987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 24513238 - 24513201
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgt 78  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  24513238 actgaaaaacatgctaagaataacgtaagatgacctgt 24513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 26348492 - 26348537
Alignment:
Q  36 aaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    |||| |||||||||||| |||||||||| |||| ||||||||||||    
T  26348492 aaatgactgaaaaacatactaagaataacgtaaaatgacctgtcat 26348537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29989084 - 29989003
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||| |||||||||||  |||| |||||| | | ||||| ||||||||| ||||||||||||| |||| |||  ||||||||    
T  29989084 ctaaaactcctctatttcggatcaaaactaaataaaaattactgaaaaatatgctaagaataacgtaagatggtctgtcatc 29989003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 34132133 - 34132174
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgac 74  Q
    |||||||| |||||||||||||||||||||| |||| |||||    
T  34132133 tgaaaatagctgaaaaacatgctaagaataaagtaagatgac 34132174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 24263792 - 24263752
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||| |||| ||||||| ||||    
T  24263792 actgaaaaacatgctaagaataacgtaagatgacctatcat 24263752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18836807 - 18836888
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||| ||||||||||||||||| | | ||||| | |||||||||||||||||||||||||| |||| ||||||||    
T  18836807 ctaatactcctatattatggatgaaaactaacttaaaatgattgaaaaacatgctaagaataatgtaagatgatctgtcatc 18836888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 25227306 - 25227355
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  25227306 tgaaaataactgaaaaacctgctaagaataatgtaagatgacctgtcatc 25227355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17649975 - 17650057
Alignment:
Q  1 ctaatactcctctattatggatgaaaa-ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| |||||||||| || | ||||||  ||||||||||||| ||||||||| |||| ||||| |||||||    
T  17649975 ctaatactcctctattctggatgaaaaactaactgaaaacgactgaaaaacatgttaagaataacgtaagatgacttgtcatc 17650057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 28621651 - 28621700
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||    
T  28621651 tgaaaataactgaaaaacatgctaagaataacgttagatgacctgtcatc 28621700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17976246 - 17976326
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    |||||||||||||||| | ||| |||||| | ||||||| ||| ||||||||||||| ||||| |||| ||||||| ||||    
T  17976246 ctaatactcctctattctagattaaaactaaatgaaaatgactaaaaaacatgctaaaaataacgtaagatgacctttcat 17976326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13833686 - 13833604
Alignment:
Q  1 ctaatactcctctattatggatgaaaa-ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||| |||||||||||||||| |  | ||||||| |||||||||||||| |||||||| |||| || || |||||||    
T  13833686 ctaatactccactattatggatgaaaagcatactgaaaatgactgaaaaacatgcaaagaataacgtaagattacttgtcatc 13833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 19265876 - 19265918
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  19265876 aactgaaaaacatgctaagaataacgtaagatgacctgtcatc 19265918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 17510959 - 17511000
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  17510959 actgaaaaacatgctaagaataatgtaagatgacctatcatc 17511000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 20400381 - 20400430
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||||| |||||||||||||| |||| |||||||||||||    
T  20400381 tgaaaatgactgaaaagcatgctaagaataacgtaagatgacctgtcatc 20400430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 13313323 - 13313272
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| ||||||||||||||||||||||| |||| | ||| |||||||    
T  13313323 attgaaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcatc 13313272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 14271898 - 14271937
Alignment:
Q  43 tgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  14271898 tgaaaaacatgctaagaataacgtaagatgacctgtcatc 14271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 21316840 - 21316879
Alignment:
Q  43 tgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  21316840 tgaaaaacatgctaagaataacgtaagatgacctgtcatc 21316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 24105562 - 24105520
Alignment:
Q  37 aataactgaaaaacatgctaagaataatgtaatatgacctgtc 79  Q
    |||||||||||||||||||||| |||| |||| ||||||||||    
T  24105562 aataactgaaaaacatgctaagcataacgtaagatgacctgtc 24105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 24520052 - 24520022
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataa 63  Q
    |||||||||||||||||||||||||||||||    
T  24520052 tgaaaataactgaaaaacatgctaagaataa 24520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 24583219 - 24583173
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||| |||||||||||||||||||||||  ||| ||||||||||||    
T  24583219 aaaatgactgaaaaacatgctaagaataacataaaatgacctgtcat 24583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 29765442 - 29765392
Alignment:
Q  33 tgaaaataactgaaaaa-catgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||| ||||| |||||||||||||| |||| |||||||||||||    
T  29765442 tgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtcatc 29765392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 5151966 - 5152015
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||| |||||||    
T  5151966 tgaaaattactgaaaaacatgttaagaataacgtaagatgacttgtcatc 5152015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 17100256 - 17100207
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||||||||||||||||||||  | | |||||||||||||    
T  17100256 tgaaaataattgaaaaacatgctaagaataacttgagatgacctgtcatc 17100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 19705033 - 19705082
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||||||||| |||||||||| |||| ||||| |||||||    
T  19705033 tgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatc 19705082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 21695455 - 21695414
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  21695455 actgaaaaacatgctaagaataacgtaagatgacatgtcatc 21695414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 24090926 - 24090893
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaa 68  Q
    ||||||||||||||||||||||||||||| ||||    
T  24090926 aaaataactgaaaaacatgctaagaataacgtaa 24090893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 24389803 - 24389852
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||| |||||| | |||||||||| |||| |||||||||||||    
T  24389803 tgaaaataactaaaaaacttactaagaataacgtaagatgacctgtcatc 24389852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 29380998 - 29380961
Alignment:
Q  45 aaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  29380998 aaaaacatgctaagaataacgtaagatgacctgtcatc 29380961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 6886726 - 6886766
Alignment:
Q  42 ctgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||| |||| ||||| |||||||    
T  6886726 ctgaaaaacatgctaagaataacgtaagatgacttgtcatc 6886766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 26829508 - 26829468
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  26829508 actgaaaaacatgctaagaataacgtaagatgacgtgtcat 26829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 28858895 - 28858931
Alignment:
Q  46 aaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  28858895 aaaacatgctaagaataatgtaagatggcctgtcatc 28858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26092920 - 26093001
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| | |||||||||| | ||||||||| ||||||| |||||||||||||||||| ||||| |||||||    
T  26092920 ctaatactcctctattctagatgaaaactaactgaaaataattgaaaaatatgctaagaataatgtaagatgacatgtcatc 26093001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7805756 - 7805838
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| |||||| |||||  | ||||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  7805756 ctaatactcctctattttggatgtaaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatc 7805838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 20886883 - 20886964
Alignment:
Q  2 taatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||| |||||| |||||  ||||||||  | ||||||||||||||||||||| |||| |||||||||||||    
T  20886883 taatactcctctattctggatgtaaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgtcatc 20886964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 819929 - 819841
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatcgcttat 88  Q
    |||||||||||||||||||  || |||||  | ||||| | ||||||||||||||||||||||| |||| ||||||| ||||| |||||    
T  819929 ctaatactcctctattatgcttgtaaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcatcacttat 819841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25530813 - 25530746
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    |||||||||||||||| ||||| |||||| | | ||||| ||||||||| ||||||||||||| ||||    
T  25530813 ctaatactcctctattttggattaaaactaaataaaaatgactgaaaaatatgctaagaataacgtaa 25530746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 8145305 - 8145342
Alignment:
Q  43 tgaaaaacatgctaagaataatgtaatatgacctgtca 80  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8145305 tgaaaaacatgctaagaataatgtaagatgacctgtca 8145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 12517337 - 12517386
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||| ||||||||||||| |||| |||||||||||||    
T  12517337 tgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatc 12517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 19912627 - 19912676
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||| ||||||||||||| |||| |||||||||||||    
T  19912627 tgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatc 19912676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 22470452 - 22470403
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  22470452 tgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 22470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 34276487 - 34276438
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||| ||||||||||||| |||| |||||||||||||    
T  34276487 tgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatc 34276438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 25850996 - 25850952
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtc 79  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||    
T  25850996 aaaataactgaaaaacatgctaagaataacataagatgacctgtc 25850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5270888 - 5270821
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    |||||||| | ||||| ||||| |||||| | | ||||| |||||||||||| |||||||||||||||    
T  5270888 ctaatacttcgctattttggattaaaactaaataaaaatgactgaaaaacatcctaagaataatgtaa 5270821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 12771252 - 12771209
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacct 76  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||    
T  12771252 tgaaaatgactgaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 1096819 - 1096762
Alignment:
Q  24 aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||| ||||||| ||| |||||||||| |||||||| |||| |||||||||||||    
T  1096819 aaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcatc 1096762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 16228387 - 16228345
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||||||||||||| |||| |||||||||||||    
T  16228387 aactgaaaagcatgctaagaataacgtaagatgacctgtcatc 16228345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 15669380 - 15669339
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||| ||||| ||||||||||||| |||||||||||||    
T  15669380 actgaaaatcatgccaagaataatgtaagatgacctgtcatc 15669339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 18457161 - 18457112
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||| ||||| |||||||||  |||| |||||||||||||    
T  18457161 tgaaaataactgaataacatcctaagaatagcgtaagatgacctgtcatc 18457112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 18535825 - 18535866
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  18535825 actgaaaaacatgctaagaataacgtaagatgacttgtcatc 18535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 52935583 - 52935534
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| | ||||||||||||||||||||| |||| ||||||| |||||    
T  52935583 tgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatc 52935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 8765719 - 8765751
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataa 63  Q
    ||||||||| |||||||||||||||||||||||    
T  8765719 attgaaaatgactgaaaaacatgctaagaataa 8765751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 8770609 - 8770641
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataa 63  Q
    ||||||||| |||||||||||||||||||||||    
T  8770609 attgaaaatgactgaaaaacatgctaagaataa 8770641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22450463 - 22450539
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacct 76  Q
    |||||||||||||||| |||| | |||||  | ||||||  |||||||| |||||||||||||| |||| |||||||    
T  22450463 ctaatactcctctattctggaagtaaaacctaatgaaaacgactgaaaagcatgctaagaataacgtaagatgacct 22450539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16157167 - 16157085
Alignment:
Q  1 ctaatactcctctattatggatgaaaa-ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||| | |||||||||| |  | ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  16157167 ctaatactcctctagtgtggatgaaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatc 16157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 34369340 - 34369419
Alignment:
Q  2 taatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||| |||| | | | |||||||||||||||||||||||||||||  ||| |||| ||||||||    
T  34369340 taatactcctctattatggataaaaattaact-aaaataactgaaaaacatgctaagaataacataagatgatctgtcatc 34369419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 32688304 - 32688250
Alignment:
Q  349 tttagacatattatattaccacctttgtgacaataattttgacgtgcaaccaaac 403  Q
    ||||||||||||||||||||| ||||||||||| |||||| | ||||||||||||    
T  32688304 tttagacatattatattaccatctttgtgacaagaattttaatgtgcaaccaaac 32688250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 25537610 - 25537652
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  25537610 aactgaaaaacatgctaagaataacgtaagatgacctgtcatc 25537652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 27907581 - 27907523
Alignment:
Q  24 aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||  |||||| |||||    
T  27907581 aaaacttactgaaaatgactgaaaaacatgctaagaataatgtaaggtgacctatcatc 27907523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32130782 - 32130700
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||| ||||||| |||||| |||||| | | ||||| ||||| |||||| |||||||||| |||| |||||||||||||    
T  32130782 ctaatacttctctattctggatgtaaaacttactaaaaatgactgataaacatactaagaataacgtaagatgacctgtcatc 32130700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 21905774 - 21905822
Alignment:
Q  34 gaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| |||||||||||||||||||||||  ||| |||||||||||||    
T  21905774 gaaaatgactgaaaaacatgctaagaataacataagatgacctgtcatc 21905822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 29892235 - 29892287
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatcg 83  Q
    ||||||||||||||||||| ||| ||||||||| |||| ||||| ||||||||    
T  29892235 attgaaaataactgaaaaatatgttaagaataacgtaagatgacatgtcatcg 29892287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 23010095 - 23010052
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgac 74  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  23010095 attgaaaatgactgaaaaacatgctaagaataacgtaagatgac 23010052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 18120588 - 18120546
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| |||| ||||| |||||||    
T  18120588 aactgaaaaacatgctaagaataacgtaagatgacatgtcatc 18120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32137995 - 32137913
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| |||||| |||||  | | ||||| ||||| ||||||  ||||||||| |||| |||||||||||||    
T  32137995 ctaatactcctctattctggatgtaaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgtcatc 32137913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 17351025 - 17351074
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||| ||| ||||||||| |||| ||||| |||||||    
T  17351025 tgaaaataactgaaaaatatgttaagaataacgtaagatgacttgtcatc 17351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 17891778 - 17891827
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||| |||||||    
T  17891778 tgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatc 17891827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 26313237 - 26313274
Alignment:
Q  45 aaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  26313237 aaaaacatgctaagaataatgtaagatgacttgtcatc 26313274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 28918235 - 28918284
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||||||||||||||||||||||| |||| ||||  |||||||    
T  28918235 tgaaaatgactgaaaaacatgctaagaataacgtaaaatgatttgtcatc 28918284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 29144694 - 29144731
Alignment:
Q  45 aaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  29144694 aaaaacatgctaagaataacgtaagatgacctgtcatc 29144731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 35680150 - 35680101
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||| ||||||||||||||||||| |||| ||| |||||||||    
T  35680150 tgaaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcatc 35680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 10108258 - 10108324
Alignment:
Q  2 taatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    |||||||| |||||| | |||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  10108258 taatactcatctattcttgatgaaaactgattgaaattaactcaaaaacatgctaagaataacgtaa 10108324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 15166515 - 15166564
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15166515 tgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatc 15166564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 464
Target Start/End: Complemental strand, 22269279 - 22269135
Alignment:
Q  320 ctaataataactattcaatatgtaatagctttagacatattatattaccacctttgtgacaataattttgacgtgcaaccaaaccttcaatgtttacgaa 419  Q
    |||||| ||| | |||||| | ||||| ||||||||||||| |||||| | |||| ||  |||| |||| |||| ||| ||||||||||||| | | |||    
T  22269279 ctaatattaattgttcaatctataataactttagacatattttattactatctttatgctaatagttttaacgtacaatcaaaccttcaatgatcatgaa 22269180  T
Q  420 ctcatctaagacattggggggttatgatcagtgaagatggttatg 464  Q
    |||| |||||||||| ||||||| |||| |  ||||| |||||||    
T  22269179 ctcacctaagacattagggggttgtgattaacgaagagggttatg 22269135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 17711353 - 17711402
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  17711353 tgaaaatgactaaaaaacatgctaagaataatgtaatttgacctgtcatc 17711402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 22171795 - 22171844
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  22171795 tgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgtcatc 22171844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25117948 - 25117867
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| ||||||||| || ||||||| | | ||||||||||| ||||||||| ||||||||| |||| || ||||||||||    
T  25117948 ctaatagtcctctattctgaatgaaaattaactgaaaataactaaaaaacatgttaagaataacgtaaaataacctgtcatc 25117867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 25025155 - 25025202
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  25025155 aaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatc 25025202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 18750871 - 18750920
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||| ||||||| |||||||||| ||||| |||||||    
T  18750871 tgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtcatc 18750920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 8968119 - 8968072
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  8968119 aaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 8968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 9849755 - 9849708
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||| |||||||||||| |||||||||| |||| |||||||||||||    
T  9849755 aaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatc 9849708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 19556592 - 19556542
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||||||| |||||||||||||| |||| |||||||||||||    
T  19556592 attgaaaatgactgaaaa-catgctaagaataacgtaagatgacctgtcatc 19556542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 9536805 - 9536755
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatcg 83  Q
    ||||||||| |||||||||||||||||||||  ||| | ||||||||||||    
T  9536805 tgaaaataattgaaaaacatgctaagaataacataagaggacctgtcatcg 9536755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 11252172 - 11252130
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||| ||||| |||| |||||||||||||    
T  11252172 aactgaaaaacatgctaaaaataacgtaagatgacctgtcatc 11252130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 17335414 - 17335356
Alignment:
Q  24 aaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| | ||||||| |||||||||||||| |||||||| |||| ||||| |||||||    
T  17335414 aaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcatc 17335356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 22350283 - 22350241
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||| ||||  |||||||    
T  22350283 aactgaaaaacatgctaagaataatgtaagatgatttgtcatc 22350241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 17218583 - 17218624
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||||| |||||    
T  17218583 actgaaaaacatgctaagaataacgtaagatgacctatcatc 17218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 17277900 - 17277941
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  17277900 actgaaaaacatgctaagaataacgtaagatgacatgtcatc 17277941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 17434481 - 17434530
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| ||| ||||||||||||| ||||| |||| |||||||||||||    
T  17434481 tgaaaatgacttaaaaacatgctaaaaataacgtaagatgacctgtcatc 17434530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20316254 - 20316182
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaatatga 73  Q
    ||||||||| |||||| ||||| |||||| | | ||||||||||||||| ||| |||||| || |||| ||||    
T  20316254 ctaatactcatctattttggattaaaactaaataaaaataactgaaaaagatgttaagaacaacgtaagatga 20316182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 17384070 - 17384119
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  17384070 tgaaaataactgaaaaacatgctaagaataatgtaagatgatctgtcatc 17384119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 14076443 - 14076492
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  14076443 tgaaaataactgaaaaccatgctaagaataacgtaagatgacctgtcatc 14076492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 14641679 - 14641728
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  14641679 tgaaaataactgaaaaacatgctaagaataacgtaagataacctgtcatc 14641728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 26820907 - 26820955
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  26820907 tgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcat 26820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 1636682 - 1636729
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  1636682 aaaataactgaaaaacatgctaagaataacgtaagatgatctgtcatc 1636729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 14078087 - 14078134
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  14078087 aaaataactaaaaaccatgctaagaataatgtaagatgacctgtcatc 14078134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34395440 - 34395374
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgattgaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    |||||||||||||||| ||||| |||||| | | |||||| |||||||||||||||| ||||||||||    
T  34395440 ctaatactcctctattttggattaaaactaaataaaaata-ctgaaaaacatgctaaaaataatgtaa 34395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 18171296 - 18171254
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||||||||||||||||| || |||||||||||||    
T  18171296 aactgaaaaacatgctaagaataatgcaagatgacctgtcatc 18171254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3358156 - 3358224
Alignment:
Q  1 ctaatactcctctattatggatgaaaactgatt-gaaaataactgaaaaacatgctaagaataatgtaa 68  Q
    |||||||||||||||| |||||| ||| |  || |||||| |||||||||||||||||||| |||||||    
T  3358156 ctaatactcctctattctggatgtaaaatctttcgaaaatgactgaaaaacatgctaagaaaaatgtaa 3358224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 33754873 - 33754908
Alignment:
Q  343 aatagctttagacatattatattaccacctttgtga 378  Q
    |||| |||||||||||||||||||||||||||||||    
T  33754873 aataactttagacatattatattaccacctttgtga 33754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 14723729 - 14723771
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatga 73  Q
    |||||||||||||||||| |||||||||||||| |||| ||||    
T  14723729 attgaaaataactgaaaagcatgctaagaataacgtaagatga 14723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 11136972 - 11137013
Alignment:
Q  40 aactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||||||||| | ||||| ||||    
T  11136972 aactgaaaaacatgctaagaataatgtaagaagacctatcat 11137013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 17822076 - 17822027
Alignment:
Q  31 attgaaaataact-gaaaaacatgctaagaataatgtaatatgacctgtc 79  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  17822076 attgaaaataactagaaaaacatgctaagaataacgtaagatgacatgtc 17822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 21687171 - 21687130
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||| |||||||    
T  21687171 actgaaaaacatgctaagaataacgtaagatgacatgtcatc 21687130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 22564597 - 22564556
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacct 76  Q
    ||||| ||||||||||||||||||||||| |||| |||||||    
T  22564597 aaaatgactgaaaaacatgctaagaataacgtaagatgacct 22564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 22845901 - 22845852
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||| ||| |||| |||  ||||||||    
T  22845901 tgaaaataactgaaaaacatgctaagagtaacgtaagatggtctgtcatc 22845852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 31878890 - 31878849
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||| |||| ||||||| |||||    
T  31878890 actgaaaaacatgctaagaataaagtaagatgacctctcatc 31878849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 14727183 - 14727235
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatcgctta 87  Q
    ||||| ||||||||||||| ||| ||||| |||| ||||||||||||| ||||    
T  14727183 aaaatgactgaaaaacatggtaataataacgtaagatgacctgtcatcactta 14727235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 23087157 - 23087109
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||| | |||||||||| ||||||||||||||| ||||||| ||||    
T  23087157 tgaaaatgattgaaaaacatactaagaataatgtaagatgacctttcat 23087109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 35193 - 35255
Alignment:
Q  2 taatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataa 63  Q
    |||||||||||||||||||||  |||||  ||||||||| |||||||||||||||||||||||    
T  35193 taatactcctctattatggatataaaacctattgaaaatgactgaaaaacatgctaagaataa 35255  T

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Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24816 - 24879
Alignment:
Q  1 ctaatactcctctattatggatg-aaaactgattgaaaataactgaaaaacatgctaagaataa 63  Q
    |||||||||||||||| |||||| |||||  ||| ||||| |||||||||||||||||||||||    
T  24816 ctaatactcctctattctggatgtaaaacctattcaaaatgactgaaaaacatgctaagaataa 24879  T

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Target: scaffold0555 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 6498 - 6549
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||||||| |||| || || |||||||    
T  6498 attgaaaataactgaaaaacatgctaagaataacgtaagataacatgtcatc 6549  T

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Target: scaffold0871 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 4004 - 4054
Alignment:
Q  32 ttgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||||||||| ||||||||||||||||||| |||| | |||||||||||    
T  4004 ttgaaaataacttaaaaacatgctaagaataacgtaagaggacctgtcatc 4054  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 92876 - 92829
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||||||||||||||||||||||| |||| || || |||||||    
T  92876 aaaataactgaaaaacatgctaagaataacgtaagataacttgtcatc 92829  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 192167 - 192218
Alignment:
Q  31 attgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||||| |||||||| |||||||| ||||| |||| |||||||||||||    
T  192167 attgaaaatgactgaaaaccatgctaaaaataacgtaagatgacctgtcatc 192218  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38305 - 38387
Alignment:
Q  1 ctaatactcctctattatggatgaaaa-ctgattgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    |||||| ||||||||| | |||||||| |  | ||||||||||||| ||||||||||||||||  ||||  ||||||||||||    
T  38305 ctaatattcctctattctagatgaaaaacctactgaaaataactgacaaacatgctaagaatagcgtaaggtgacctgtcatc 38387  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 88486 - 88437
Alignment:
Q  33 tgaaaataactgaaaaacatgctaagaataatgtaatatgacctgtcatc 82  Q
    ||||||| | ||||||||||||||||||||| |||| ||||| |||||||    
T  88486 tgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatc 88437  T

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Target: scaffold0386 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 4914 - 4874
Alignment:
Q  41 actgaaaaacatgctaagaataatgtaatatgacctgtcat 81  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  4914 actgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 41388 - 41416
Alignment:
Q  35 aaaataactgaaaaacatgctaagaataa 63  Q
    |||||||||||||||||||||||||||||    
T  41388 aaaataactgaaaaacatgctaagaataa 41416  T

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