View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17143_low_2 (Length: 763)
Name: NF17143_low_2
Description: NF17143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17143_low_2 |
 | |
|
| [»] scaffold0210 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 720; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 720; E-Value: 0
Query Start/End: Original strand, 18 - 753
Target Start/End: Original strand, 2886846 - 2887581
Alignment:
| Q |
18 |
aggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagc |
117 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2886846 |
aggttcaaggggtactagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcacagccttaatgggagttagtggagc |
2886945 |
T |
|
| Q |
118 |
tggtaaaactactttaatggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886946 |
tggtaaaactactttaatggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacg |
2887045 |
T |
|
| Q |
218 |
tttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887046 |
tttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccag |
2887145 |
T |
|
| Q |
318 |
cagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacactgatttttctgtttttactatttgattgattgagatatttggcatttgga |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887146 |
cagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacactgatttttctgtttttactatttgattgattgagatatttggcatttgga |
2887245 |
T |
|
| Q |
418 |
tcatatactaatttttcatacttttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactct |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887246 |
tcatatactaatttttcatacttttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactct |
2887345 |
T |
|
| Q |
518 |
ttggttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatgg |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887346 |
ttggttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgcagttgaattagtggccaatccatccataattttcatgg |
2887445 |
T |
|
| Q |
618 |
atgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattca |
717 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887446 |
atgagcctacatctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattca |
2887545 |
T |
|
| Q |
718 |
tcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887546 |
tcaaccaagtattgacatattcgaagcttttgatga |
2887581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 524; E-Value: 0
Query Start/End: Original strand, 18 - 753
Target Start/End: Complemental strand, 2897530 - 2896773
Alignment:
| Q |
18 |
aggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagc |
117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
2897530 |
aggttcaaggtgtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcacagcattaatgggagttagtggagc |
2897431 |
T |
|
| Q |
118 |
tggtaaaactactttaatggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | |||||||||||| || |||| ||||| |||||||||| |
|
|
| T |
2897430 |
tggtaaaactactttaatggatgttttggctggtagaaaaaccggtggttatatcgatggcaccataaaaatttcaggctaccttaaaagacaagaaacg |
2897331 |
T |
|
| Q |
218 |
tttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccag |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2897330 |
tttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcaatggtctactcggcctggcttcgtttaccag |
2897231 |
T |
|
| Q |
318 |
cagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacact----gatttttctgttttt-actat-ttgattgattgagatatt----- |
406 |
Q |
| |
|
|||| |||||||| ||| |||||||||| |||||||||| ||||||||||| ||||||||||||||| |||| || ||||||| ||||||| |
|
|
| T |
2897230 |
cagaagttgattccaattccagaaaggttagtatttaaagctcaagacactttgtgatttttctgttttttactagattcattgatttagatattcattc |
2897131 |
T |
|
| Q |
407 |
-----------tggcatttggatcatatactaatttttcatacttttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtgga |
495 |
Q |
| |
|
||| ||| ||| |||| |||| || |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2897130 |
attgagacatctggaattcggaacatagactatttgttcatactttggaatctgataaatggttgtagatgttcatcgaggaagtcatggaactagtgga |
2897031 |
T |
|
| Q |
496 |
gctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggcc |
595 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2897030 |
gctcaatccattgagaaactctttggttggtttgcctggtgtgaatggcctttcaactgaacaacgcaagaggctaactattgcagttgaattagtggcc |
2896931 |
T |
|
| Q |
596 |
aatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaa |
695 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2896930 |
aatccatccataattttcatggatgagcctacatctggattagatgctagagctgctgcaattgttatgcgaacagttaggaacacggttgacacaggaa |
2896831 |
T |
|
| Q |
696 |
gaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2896830 |
gaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
2896773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 436 - 753
Target Start/End: Original strand, 2877741 - 2878058
Alignment:
| Q |
436 |
tacttttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggt |
535 |
Q |
| |
|
|||||||| |||| | |||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| ||||| | ||||||||||||||| |
|
|
| T |
2877741 |
tacttttgaatctaacaaatatttgtagatgttcattgaggaagttatggaactagtcgagctgaatccgctgaggaactcactagttggtttgcctggt |
2877840 |
T |
|
| Q |
536 |
gtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggat |
635 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
2877841 |
gtgagcggtctttcaaccgaacaacgcaagaggttaactatttcagttgaattagtggccaatccatccataattttcatggacgagcctacatctggat |
2877940 |
T |
|
| Q |
636 |
tagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacat |
735 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
2877941 |
tagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgtaccattcatcaaccaagtatcgacat |
2878040 |
T |
|
| Q |
736 |
attcgaagcttttgatga |
753 |
Q |
| |
|
||| ||| |||||||||| |
|
|
| T |
2878041 |
atttgaatcttttgatga |
2878058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 33 - 354
Target Start/End: Original strand, 2877094 - 2877415
Alignment:
| Q |
33 |
tagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactacttt |
132 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||||||||||| |
|
|
| T |
2877094 |
tagaggataggctagtgcttttgaagggagttagtggtgcatttagacctggtgttctcacagctttgatgggtgttagtggagctggtaaaactacttt |
2877193 |
T |
|
| Q |
133 |
aatggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctct |
232 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||| |
|
|
| T |
2877194 |
gatggatgtattggctggtaggaaaactagtggttatattgatgggagcataaaaatttctggttaccctaaaaagcaagaaacatttgctagaatctct |
2877293 |
T |
|
| Q |
233 |
ggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaa |
332 |
Q |
| |
|
|| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | | || || || |||||||||||||| ||||| |||||||| | |
|
|
| T |
2877294 |
ggctattgtgagcagaatgatatccactcccctcaagttactgtctatgagtccttactgtattcagcttggcttcgtttaccggcagaagttgattcca |
2877393 |
T |
|
| Q |
333 |
ataccagaaaggtaagtattta |
354 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
2877394 |
ataccagaaaggttagtattta |
2877415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 753
Target Start/End: Complemental strand, 53668666 - 53668551
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||| || || ||||| || |||||| | ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
53668666 |
gatgctagagccgctgctattgtgatgcgaactgtgagaaacacagtagacacatggagaacggttgtgtgcacaattcaccaaccaagcattgatattt |
53668567 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
53668566 |
tttaagcttttgatga |
53668551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 753
Target Start/End: Original strand, 35420893 - 35421008
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||| || || ||||| || |||||||| ||||| ||| | ||||| ||||| |||||||| ||||| || | |
|
|
| T |
35420893 |
gatgctagagtcgctgctattgtgatgcgaaatgtgagaaacacagtagacacagggagaactgttctgtgcacaattcaccaaccaagcattgatattt |
35420992 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
35420993 |
tttaagcttttgatga |
35421008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 540 - 678
Target Start/End: Original strand, 46452166 - 46452304
Alignment:
| Q |
540 |
atggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattaga |
639 |
Q |
| |
|
||||||| ||||| |||||||| || ||| | ||||| || || ||| |||| ||||| || || || | |||||||||||||| ||||| ||||| || |
|
|
| T |
46452166 |
atggtctgtcaacagaacaacgaaaaaggttgactatagcagtggaactagttgccaacccttctatggtcttcatggatgagcccacgtccggattgga |
46452265 |
T |
|
| Q |
640 |
tgctagagctgctgcaattgttatgcgaaccgttaggaa |
678 |
Q |
| |
|
|||||| ||||| || ||||| ||| |||| || ||||| |
|
|
| T |
46452266 |
tgctagggctgcagccattgtgatgagaactgtgaggaa |
46452304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 666
Target Start/End: Original strand, 51049647 - 51049717
Alignment:
| Q |
596 |
aatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcg |
666 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||| || || || |||||| ||||||||||| | |||||||| |
|
|
| T |
51049647 |
aatccatcgataatttttatggatgaacctacatcaggtttggatgctcgagctgctgcagtagttatgcg |
51049717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 158; Significance: 1e-83; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 452 - 753
Target Start/End: Complemental strand, 44233879 - 44233578
Alignment:
| Q |
452 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
551 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||| ||||||| |||||| | ||||||||||||||||||| |||||| |||| |
|
|
| T |
44233879 |
aaatggttgcagatgtttattgacgaagtcatggatctagtggagctgaactcattgaggaactctctagttggtttgcctggtgtgagtggtctctcaa |
44233780 |
T |
|
| Q |
552 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
651 |
Q |
| |
|
| ||||| |||||||| || |||||||| |||||| | ||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
44233779 |
ctgaacagcgcaagagactgactattgcagttgaacttgtggctaatccatctataatttttatggatgagcctacttctggtttagatgctagagctgc |
44233680 |
T |
|
| Q |
652 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
751 |
Q |
| |
|
||||||||||||| |||| || |||||||| || |||||||||||||||||||| || ||||| ||||| || || ||||||||||| ||||| |||||| |
|
|
| T |
44233679 |
tgcaattgttatgagaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcagcctagcattgacatatttgaagcatttgat |
44233580 |
T |
|
| Q |
752 |
ga |
753 |
Q |
| |
|
|| |
|
|
| T |
44233579 |
ga |
44233578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 452 - 753
Target Start/End: Complemental strand, 44223057 - 44222756
Alignment:
| Q |
452 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
551 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||| | ||||| |||||| | ||||||||||||||||||| |||||| |||| |
|
|
| T |
44223057 |
aaatggttgcagatgtttattgatgaagtcatggatctagtggagctgaactcgttgaggaactctctagttggtttgcctggtgtgagtggtctctcaa |
44222958 |
T |
|
| Q |
552 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
651 |
Q |
| |
|
| ||||| |||||||| || |||||||| || ||| | ||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| || |
|
|
| T |
44222957 |
ctgaacagcgcaagagactgactattgcagtcgaacttgtggctaatccatctataattttcatggatgagcctacttctggtttagatgctagagcggc |
44222858 |
T |
|
| Q |
652 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
751 |
Q |
| |
|
|||||||||||||||||| || |||||||| || ||||| |||||||||||||| || ||||| |||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
44222857 |
tgcaattgttatgcgaactgtaaggaacacagtggacacgggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgat |
44222758 |
T |
|
| Q |
752 |
ga |
753 |
Q |
| |
|
|| |
|
|
| T |
44222757 |
ga |
44222756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 452 - 753
Target Start/End: Complemental strand, 44210857 - 44210556
Alignment:
| Q |
452 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
551 |
Q |
| |
|
||||| ||| ||||||| ||||||||||| ||||| || |||||||| ||| | ||||| |||| | ||||||||||||||||| | |||||| |||| |
|
|
| T |
44210857 |
aaatgcttgcagatgtttattgaggaagtaatggatcttgtggagctgaactcgttgagggactccctcgttggtttgcctggtgttagtggtctctcaa |
44210758 |
T |
|
| Q |
552 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
651 |
Q |
| |
|
| |||||||| || ||| | |||||||| |||||| ||||||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
44210757 |
cggaacaacgtaaaaggttgactattgcagttgaactagtggctaatccgtccataattttcatggatgaaccaacttctggtttagatgctagagctgc |
44210658 |
T |
|
| Q |
652 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
751 |
Q |
| |
|
||||||||||||| |||| || |||||||| || |||||||||||||||||||| || ||||| |||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
44210657 |
tgcaattgttatgagaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgat |
44210558 |
T |
|
| Q |
752 |
ga |
753 |
Q |
| |
|
|| |
|
|
| T |
44210557 |
ga |
44210556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 41 - 345
Target Start/End: Complemental strand, 44223429 - 44223125
Alignment:
| Q |
41 |
agattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatg |
140 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||| || || ||||| || ||||||||||||||||| ||| | ||||||| |
|
|
| T |
44223429 |
agattagtgcttttgaagggtgttagtggtgcattcaggcccggtgttctcacagctttgatgggtgtaagtggagctggtaaaacaactctgatggatg |
44223330 |
T |
|
| Q |
141 |
ttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattg |
240 |
Q |
| |
|
|| |||||||||||||||| ||||| |||||||| || ||| || ||||||||||||||||||| |||||||| |||||| |||| ||||| || || |
|
|
| T |
44223329 |
ttctggctggtaggaaaacaggtggatatattgatggagacatcaaggtttctgggtaccctaaaaagcaagaaacatttgctagaatttctggctactg |
44223230 |
T |
|
| Q |
241 |
tgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccaga |
340 |
Q |
| |
|
||||||||||||||||||||| || |||||||| || |||||||| || | || ||||| |||||||||||||| ||| |||||||| || |||||| |
|
|
| T |
44223229 |
tgagcagaatgatatccattcaccgcatgttacagtttatgagtctttgctttattcggcgtggcttcgtttaccttcaggagttgattccaacaccaga |
44223130 |
T |
|
| Q |
341 |
aaggt |
345 |
Q |
| |
|
||||| |
|
|
| T |
44223129 |
aaggt |
44223125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 34 - 345
Target Start/End: Complemental strand, 44234258 - 44233947
Alignment:
| Q |
34 |
agaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactacttta |
133 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| || || || || ||||| || ||||||||||||||||| ||| | |
|
|
| T |
44234258 |
agaggacagattagtgcttttgaagggtgttagtggcgcattcaggcctggtgtacttacggctttgatgggtgtaagtggagctggtaaaacaactctg |
44234159 |
T |
|
| Q |
134 |
atggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctg |
233 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||||||| || ||| || |||||||||| |||||||| |||||||| |||||| ||||||| | |
|
|
| T |
44234158 |
atggatgttctggctggtaggaaaacaggtggatatattgatggagacatcaaggtttctgggtatcctaaaaagcaagaaacatttgctagaatctccg |
44234059 |
T |
|
| Q |
234 |
gttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaa |
333 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||| || |||||||| || | ||||| || |||||||||||||| ||| |||||||| || |
|
|
| T |
44234058 |
gttactgtgagcagaatgatatccattcacctcatgttacagtttatgagtctttgctttactcagcgtggcttcgtttaccttcaggagttgattccaa |
44233959 |
T |
|
| Q |
334 |
taccagaaaggt |
345 |
Q |
| |
|
||||||||||| |
|
|
| T |
44233958 |
caccagaaaggt |
44233947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 34 - 345
Target Start/End: Complemental strand, 44211274 - 44210963
Alignment:
| Q |
34 |
agaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactacttta |
133 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| |||||||| ||||| ||||||||||| || || ||||| || ||||||||||||||||| ||| | |
|
|
| T |
44211274 |
agaggacagactagtgcttttgaagggtgttagcggtgcattcaggcccggtgttctcacagctttgatgggtgtaagtggagctggtaaaacaactctg |
44211175 |
T |
|
| Q |
134 |
atggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctg |
233 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||||||| || ||| || ||||||||||||||||||| |||||||| |||||| |||| |||| |
|
|
| T |
44211174 |
atggatgttctggctggtaggaaaacaggtggatatattgatggagacatcaaggtttctgggtaccctaaaaagcaagaaacatttgctagaatatctg |
44211075 |
T |
|
| Q |
234 |
gttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaa |
333 |
Q |
| |
|
| || ||||| ||||||||||| ||||| ||||||||||| || ||||| || || | ||||| || |||||||||||||| | | |||||||| || |
|
|
| T |
44211074 |
gctactgtgaacagaatgatattcattcacctcatgttacagtttatgaatcccttctttactcagcatggcttcgtttaccttctggagttgattccaa |
44210975 |
T |
|
| Q |
334 |
taccagaaaggt |
345 |
Q |
| |
|
||| |||||||| |
|
|
| T |
44210974 |
tactagaaaggt |
44210963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 43457796 - 43457689
Alignment:
| Q |
67 |
tggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctggtaggaaaactggtggt |
166 |
Q |
| |
|
||||||||| |||||||| ||||| || || ||||||||||||||||||||||| || || ||||| ||||||||||| ||||| ||||| || |||||| |
|
|
| T |
43457796 |
tggtgcattcaggcctggagttctaacggctttaatgggagttagtggagctggaaagacaactttgatggatgttttagctggaaggaagacaggtggt |
43457697 |
T |
|
| Q |
167 |
tatattga |
174 |
Q |
| |
|
|| ||||| |
|
|
| T |
43457696 |
tacattga |
43457689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 717
Target Start/End: Complemental strand, 43457131 - 43456962
Alignment:
| Q |
548 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
647 |
Q |
| |
|
|||||||||||||| || |||||||| || || ||||| | | || ||||| || || |||||||||||||| || || || || | ||||| |||| |
|
|
| T |
43457131 |
tcaaccgaacaacgaaaaaggctaacaatagcggttgagcttattgctaatccttcaatcattttcatggatgaaccaacttcaggtcttgatgcaagag |
43457032 |
T |
|
| Q |
648 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattca |
717 |
Q |
| |
|
|||| |||||||||||| | || || || ||||| |||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
43457031 |
ctgcagcaattgttatgaggacagtgagaaacactgttgacactggaagaacagttgtctgcacaattca |
43456962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 545 - 753
Target Start/End: Complemental strand, 2160434 - 2160226
Alignment:
| Q |
545 |
ctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgcta |
644 |
Q |
| |
|
||||| ||||||||||||||||| ||||| || || |||||| | || || |||||||| ||||| |||||||||||||| || ||||| | ||||||| |
|
|
| T |
2160434 |
ctttcgaccgaacaacgcaagagactaacgatcgcagttgaacttgtagcgaatccatcgataatattcatggatgagccaacctctggccttgatgcta |
2160335 |
T |
|
| Q |
645 |
gagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagc |
744 |
Q |
| |
|
|||| ||||||||||| ||| |||| || |||||||| |||||||||||| | || ||||||||||| || ||||| |||||||||||||||||||| || |
|
|
| T |
2160334 |
gagcagctgcaattgtaatgagaacagtgaggaacacagttgacacaggacgtactgttgtttgcacaatccatcagccaagtattgacatattcgacgc |
2160235 |
T |
|
| Q |
745 |
ttttgatga |
753 |
Q |
| |
|
|||||||| |
|
|
| T |
2160234 |
ctttgatga |
2160226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 462 - 738
Target Start/End: Complemental strand, 2148689 - 2148413
Alignment:
| Q |
462 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
561 |
Q |
| |
|
||||||| ||||||||||| ||||| || || ||||| ||| |||| ||| | | | ||||| ||||| || | ||||| |||||||||||||| || |
|
|
| T |
2148689 |
agatgtttattgaggaagttatggagcttgtagagcttaactcattaagagaagcacttgttggattgccaggcgaaaatggactttcaaccgaacagcg |
2148590 |
T |
|
| Q |
562 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
661 |
Q |
| |
|
|||||| || |||||||| |||||| | || || |||||||| ||||| ||||||||||| || || ||||| | |||||| |||| ||||| ||||| |
|
|
| T |
2148589 |
caagagacttactattgcagttgaacttgtagcgaatccatcgataatattcatggatgaaccaacctctggcctggatgctcgagcagctgcgattgta |
2148490 |
T |
|
| Q |
662 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatatt |
738 |
Q |
| |
|
|||||||| || |||||||| || ||||||||| | || || || ||||| || ||||| || |||||||||||||| |
|
|
| T |
2148489 |
atgcgaacagtaaggaacactgtggacacaggacgtaccgtggtgtgcacgatccatcagccgagtattgacatatt |
2148413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 49 - 316
Target Start/End: Complemental strand, 2161114 - 2160847
Alignment:
| Q |
49 |
acttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggct |
148 |
Q |
| |
|
||||||||||||| | | ||| || ||||||||||| || || ||||| || ||||| || ||||| || || || |||||| ||||||||||||| ||| |
|
|
| T |
2161114 |
acttttgaagggtatcaatggcgcctttaggcctggagtactaactgctttgatgggtgtaagtggtgccggaaagactactctaatggatgttttagct |
2161015 |
T |
|
| Q |
149 |
ggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcaga |
248 |
Q |
| |
|
|| |||||||||||||| |||||||| || | ||| | ||| || || || || || || ||| |||| |||||||| || || || ||||| ||||| |
|
|
| T |
2161014 |
ggaaggaaaactggtggatatattgatggaaacatcacaatatccggctatccaaagaatcaaaaaacatttgctcgcatatcgggatattgcgagcaat |
2160915 |
T |
|
| Q |
249 |
atgatatccattctcctcatgttactgtctatgagtcactggtctactcggcctggcttcgtttacca |
316 |
Q |
| |
|
|||||||||||| ||| ||||||| || ||||| || || | || ||||| ||||||||||||||| |
|
|
| T |
2160914 |
ttgatatccattcacctaatgttacagtttatgaatctttgttatattcggcatggcttcgtttacca |
2160847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 563 - 753
Target Start/End: Original strand, 19543187 - 19543377
Alignment:
| Q |
563 |
aagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtta |
662 |
Q |
| |
|
|||||||| || |||||||| ||||| || || || || ||||| || || |||||||| || ||| |||| | |||||||||||||| ||| | |||| |
|
|
| T |
19543187 |
aagaggcttaccattgctgtagaattggttgcaaacccttccattatctttatggatgaaccaacgactggtcttgatgctagagctgcagcagtagtta |
19543286 |
T |
|
| Q |
663 |
tgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||||| || || ||| ||||||||| |
|
|
| T |
19543287 |
tgcgtactgttagaaacacagttgatacagggagaactgttgtgtgcacaattcatcaaccaagtattgatatttttgaaaattttgatga |
19543377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 2149131 - 2149030
Alignment:
| Q |
49 |
acttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggct |
148 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| || || || || || ||||| || ||||| ||||| || |||||||||||||||||||| ||| |
|
|
| T |
2149131 |
acttttgaagggtgttagtggtgcttttagacctggagtactaacagctttgatgggtgtaagtggtgctggaaagactactttaatggatgttttagct |
2149032 |
T |
|
| Q |
149 |
gg |
150 |
Q |
| |
|
|| |
|
|
| T |
2149031 |
gg |
2149030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 548 - 753
Target Start/End: Complemental strand, 41687359 - 41687154
Alignment:
| Q |
548 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
647 |
Q |
| |
|
||||| |||||| | ||||| || || |||||||| ||||| || |||||||| || || || || |||||||||||||| || || | ||||| |||| |
|
|
| T |
41687359 |
tcaacagaacaaagaaagagactcaccattgctgtagaattggttgccaatccttcaatcatctttatggatgagcctacatcaggccttgatgccagag |
41687260 |
T |
|
| Q |
648 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttt |
747 |
Q |
| |
|
|||| |||||||||||||| || || || || || | || ||||| ||||| || || ||||| ||||| |||||||| ||||| ||||| ||| |||| |
|
|
| T |
41687259 |
ctgcagcaattgttatgcgtactgtcagaaatacagcggatacagggagaactgtggtctgcacaattcaccaaccaagcattgatatatttgaatcttt |
41687160 |
T |
|
| Q |
748 |
tgatga |
753 |
Q |
| |
|
|||||| |
|
|
| T |
41687159 |
tgatga |
41687154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 753
Target Start/End: Complemental strand, 25986741 - 25986626
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
||||||||||| ||||| |||| |||||||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
25986741 |
gatgctagagccgctgctattgagatgcgaactgtgagaaacacggtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattt |
25986642 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
25986641 |
tttaagcttttgatga |
25986626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 41687821 - 41687770
Alignment:
| Q |
132 |
taatggatgttttggctggtaggaaaactggtggttatattgacgggagcat |
183 |
Q |
| |
|
||||||||||| | ||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
41687821 |
taatggatgttcttgctggaagaaaaactggtggttatattgaagggagcat |
41687770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 4e-37; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 462 - 753
Target Start/End: Complemental strand, 39537907 - 39537616
Alignment:
| Q |
462 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
561 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| || || ||| || | ||| | || || || | |||||||| | |||| ||||| || || || |
|
|
| T |
39537907 |
agatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagcagcg |
39537808 |
T |
|
| Q |
562 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
661 |
Q |
| |
|
||| ||||| |||||||| ||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||| || ||||| || |||||| |
|
|
| T |
39537807 |
caaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatgagccaacttctggacttgatgcaagggctgcagctattgtt |
39537708 |
T |
|
| Q |
662 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
||| |||| ||||||||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||||| ||||| ||| |||||||||| |
|
|
| T |
39537707 |
atgagaacagttaggaacacagtagacactggaagaacagttgtttgtaccattcaccaacctagcattgatatatttgaatcttttgatga |
39537616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 458 - 753
Target Start/End: Complemental strand, 39547376 - 39547081
Alignment:
| Q |
458 |
ttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaac |
557 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||| || || ||| || |||| | | || || | |||||||| | ||||| ||||| || | |
|
|
| T |
39547376 |
ttgtagatgttcattgaggaagtaatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggtgttagcggtctctcaacggagc |
39547277 |
T |
|
| Q |
558 |
aacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaat |
657 |
Q |
| |
|
| ||||| ||||| |||||||| ||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||| |||||||| || || |
|
|
| T |
39547276 |
agcgcaaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatgagccaacttctggacttgatgcaagagctgcagctat |
39547177 |
T |
|
| Q |
658 |
tgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
||||||| |||| ||||||||||| || ||||| ||||||||||||||||| ||||| || || || || ||||| ||||| ||| |||||||||| |
|
|
| T |
39547176 |
tgttatgagaacagttaggaacacagtagacaccggaagaacagttgtttgtaccatccaccagcctagcattgatatatttgaatcttttgatga |
39547081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 74 - 282
Target Start/End: Complemental strand, 39589547 - 39589339
Alignment:
| Q |
74 |
tttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctggtaggaaaactggtggttatattg |
173 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || | || ||||| ||||||||||| ||||||| | ||||||| ||||||||||| ||||||| |
|
|
| T |
39589547 |
tttaggcctggtgttctcactgctttaatgggcgtcacgggtgctggaaaaactactttgttggatgtgctttctggtagaaaaactggtggatatattg |
39589448 |
T |
|
| Q |
174 |
acgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttac |
273 |
Q |
| |
|
|||| ||| | ||||||||| || ||||| || |||||||| ||||| |||| ||||| || |||||||| ||||||||||| |||||||||||||| |
|
|
| T |
39589447 |
gtgggaccatcacaatttctggatatcctaagaagcaagaaacatttgcaagaatttctggatactgtgagcaaaatgatatccactctcctcatgttac |
39589348 |
T |
|
| Q |
274 |
tgtctatga |
282 |
Q |
| |
|
||| ||||| |
|
|
| T |
39589347 |
tgtatatga |
39589339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 533 - 753
Target Start/End: Complemental strand, 42153772 - 42153552
Alignment:
| Q |
533 |
ggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctg |
632 |
Q |
| |
|
|||||| ||||||| ||||| |||||| | |||||||| ||||||||||| || | || ||||| || || || || ||||||||||| || || || | |
|
|
| T |
42153772 |
ggtgtggatggtctatcaacagaacaaaggaagaggcttactattgctgtagagcttgttgccaacccttcaatcatcttcatggatgaaccaacatcag |
42153673 |
T |
|
| Q |
633 |
gattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattga |
732 |
Q |
| |
|
| | ||||||||||| |||||||| |||||||||||||| || || || || || ||||| ||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
42153672 |
gcctcgatgctagagccgctgcaatcgttatgcgaaccgtgagaaatacagtagatacagggagaactgttgtttgcacaattcatcaaccaagtataga |
42153573 |
T |
|
| Q |
733 |
catattcgaagcttttgatga |
753 |
Q |
| |
|
||| || |||||||||||||| |
|
|
| T |
42153572 |
catttttgaagcttttgatga |
42153552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 533 - 753
Target Start/End: Complemental strand, 42141970 - 42141750
Alignment:
| Q |
533 |
ggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctg |
632 |
Q |
| |
|
|||||| ||||||| ||||| |||||| | |||||||| ||||| |||||||| | || ||||| || || || || ||||||||||| || || || | |
|
|
| T |
42141970 |
ggtgtggatggtctatcaacagaacaaaggaagaggcttactatcgctgttgagcttgttgccaacccttcaatcatcttcatggatgaaccaacatcag |
42141871 |
T |
|
| Q |
633 |
gattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattga |
732 |
Q |
| |
|
| | ||||||||||| |||||||| |||||||| ||||| || || || || || ||||| ||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
42141870 |
gcctcgatgctagagccgctgcaatcgttatgcggaccgtgagaaatacagtggatacagggagaactgttgtttgcacaattcatcaaccaagtataga |
42141771 |
T |
|
| Q |
733 |
catattcgaagcttttgatga |
753 |
Q |
| |
|
||| || |||||||||||||| |
|
|
| T |
42141770 |
catttttgaagcttttgatga |
42141750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 462 - 753
Target Start/End: Original strand, 39338949 - 39339240
Alignment:
| Q |
462 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
561 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || || ||| || |||| | | || || | |||||||| | ||||| ||||| || || || |
|
|
| T |
39338949 |
agatgttcattgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggtgttagcggtctctcaacggagcagcg |
39339048 |
T |
|
| Q |
562 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
661 |
Q |
| |
|
||| ||||| ||| |||| ||||| || || || ||||| || ||||| |||||||||||||| || ||||| ||||||| || ||||| || |||||| |
|
|
| T |
39339049 |
caaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgggctagatgcaagggctgcagctattgtt |
39339148 |
T |
|
| Q |
662 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
||| |||| ||||||||||| || ||||| ||||||||||||||||| || || || || || || ||||| ||||| ||| |||||||||| |
|
|
| T |
39339149 |
atgagaacagttaggaacacagtagacactggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatga |
39339240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 461 - 753
Target Start/End: Complemental strand, 1084710 - 1084418
Alignment:
| Q |
461 |
tagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaac |
560 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || || || || ||||| | || || || | |||||||| | |||| ||||| || | | |
|
|
| T |
1084710 |
tagatgttcattgaggaagtcatggaacttgtggaactgaaatcagtgcgaaacgcattagtaggactacctggtgttagcagtctctcaacagagtagc |
1084611 |
T |
|
| Q |
561 |
gcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgt |
660 |
Q |
| |
|
||| ||||| |||||||| ||||| || || | ||||| || ||||| || ||||||||||| || ||||| ||||||| | || || || ||||| |
|
|
| T |
1084610 |
acaaaaggctgactattgcagttgagttggtttctaatccttctataatatttatggatgagccaacttctgggctagatgcaatggcagcagcgattgt |
1084511 |
T |
|
| Q |
661 |
tatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||| |||| ||||||| ||| || ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
1084510 |
tatgagaacagttaggagcacagtagacactggaagaactgttgtttgcaccatccatcaaccaagtattgatatatttgaatcttttgatga |
1084418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 528 - 753
Target Start/End: Original strand, 39366438 - 39366663
Alignment:
| Q |
528 |
tgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctac |
627 |
Q |
| |
|
|||||||||| | |||||| || || || || ||||| ||||||||| |||| |||||||| || || ||||| || ||||| |||||||||||||| || |
|
|
| T |
39366438 |
tgcctggtgttagtggtctctcgacagagcagcgcaaaaggctaactgttgcagttgaattggtagctaatccttcaataatattcatggatgagccaac |
39366537 |
T |
|
| Q |
628 |
gtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagt |
727 |
Q |
| |
|
||||| ||||||| || ||||| || || || ||| || | ||||||||||| |||||||| |||||||| |||||||| ||||| || || || || |
|
|
| T |
39366538 |
ttctgggctagatgcgagggctgcagctatagtgatgagagcagttaggaacacagttgacaccggaagaactgttgtttgtaccatccaccagcctagc |
39366637 |
T |
|
| Q |
728 |
attgacatattcgaagcttttgatga |
753 |
Q |
| |
|
||||| ||||| ||| |||||||||| |
|
|
| T |
39366638 |
attgatatatttgaatcttttgatga |
39366663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 453 - 753
Target Start/End: Complemental strand, 39564012 - 39563712
Alignment:
| Q |
453 |
aatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaac |
552 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||| ||||| || || ||| || |||| | || || || |||||||||| |||||||| || || |
|
|
| T |
39564012 |
aatggttgcagatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcattagtaggactgcctggtgttaatggtctctcgac |
39563913 |
T |
|
| Q |
553 |
cgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgct |
652 |
Q |
| |
|
|| || ||||| || | || ||||| ||||| || || || ||||| || ||||| ||||||||||| || || ||||| ||||||| || ||||| |
|
|
| T |
39563912 |
ggagcagcgcaaacggttgacaattgcagttgagttggtagctaatccttcaataatattcatggatgaaccaacttctgggctagatgcaagggctgca |
39563813 |
T |
|
| Q |
653 |
gcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatg |
752 |
Q |
| |
|
|| ||||| ||| |||| ||||||||||| || |||| ||||||||||||||||| || || || || || || ||||| ||||| ||| ||||||||| |
|
|
| T |
39563812 |
gctattgtgatgagaacagttaggaacacagtaaacactggaagaacagttgtttgtactatccaccagcctagcattgatatatttgaatcttttgatg |
39563713 |
T |
|
| Q |
753 |
a |
753 |
Q |
| |
|
| |
|
|
| T |
39563712 |
a |
39563712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 50 - 282
Target Start/End: Complemental strand, 39547743 - 39547511
Alignment:
| Q |
50 |
cttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctg |
149 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| | ||||| || | ||| || || ||||| ||| | |||||||| | ||| |
|
|
| T |
39547743 |
cttttgaagggtgtaagtggagctttcagacctggtgttctcactgctctgatgggtgtgactggtgcaggcaaaacaactctgatggatgtactttctg |
39547644 |
T |
|
| Q |
150 |
gtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaa |
249 |
Q |
| |
|
|||| ||||||||||| ||||||| |||| ||| | ||| ||||| || || || || ||||| || ||||| |||| || || || |||||||| | |
|
|
| T |
39547643 |
gtagaaaaactggtggatatattggtgggaacatcacaatatctggctatccaaagaagcaagatacctttgcaagaatttcaggatactgtgagcaaac |
39547544 |
T |
|
| Q |
250 |
tgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
39547543 |
tgatatccattctcctcatgttactgtctatga |
39547511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 50 - 282
Target Start/End: Complemental strand, 39564522 - 39564290
Alignment:
| Q |
50 |
cttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctg |
149 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| ||||||| || | || ||||| ||||| ||| | |||||||| | ||| |
|
|
| T |
39564522 |
cttttgaagggtgtaagtggagctttcagacctggtgttctcactgctctaatgggtgtgaccggtgctggcaaaacaactctgatggatgtgctttctg |
39564423 |
T |
|
| Q |
150 |
gtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaa |
249 |
Q |
| |
|
|||||||||| || || ||||||| |||| ||| | |||||| || | || || || |||||||| ||||| |||| ||||| || |||||||| || |
|
|
| T |
39564422 |
gtaggaaaaccggaggatatattggtgggaacatcacaatttccggctttccaaagaagcaagaaacctttgcaagaatttctgggtactgtgagcaaaa |
39564323 |
T |
|
| Q |
250 |
tgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| |
|
|
| T |
39564322 |
tgatatccactctccttatgttactgtctatga |
39564290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 35 - 282
Target Start/End: Original strand, 39338563 - 39338810
Alignment:
| Q |
35 |
gaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaa |
134 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| || || || || ||||||||||| || | ||||| | | || ||||| ||||| ||| | | |
|
|
| T |
39338563 |
gaggataagttagttcttttgaagggtgtaagtggagctttcagaccaggtgttctcaccgctctgatgggcatcaccggtgctgggaaaacaactctga |
39338662 |
T |
|
| Q |
135 |
tggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctgg |
234 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||||| |||| ||| |||||||| || | || || || |||||||| ||||| |||| ||||| |
|
|
| T |
39338663 |
tggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcaaaatttccggctttccaaagaagcaagaaacctttgcaagaatttctgg |
39338762 |
T |
|
| Q |
235 |
ttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
|| |||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
39338763 |
atactgtgagcaaactgatatccattctcctcatgttactgtctatga |
39338810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 530 - 753
Target Start/End: Complemental strand, 42171613 - 42171390
Alignment:
| Q |
530 |
cctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgt |
629 |
Q |
| |
|
||||||||| ||||||| ||||| |||||| | ||||| || | ||||||||| ||||| || || || || || || || ||||||||||| || || | |
|
|
| T |
42171613 |
cctggtgtggatggtctatcaacagaacaaaggaagagacttagtattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacat |
42171514 |
T |
|
| Q |
630 |
ctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtat |
729 |
Q |
| |
|
| || | ||||||||||| ||||| ||||||||||| ||||| || || || || || ||||| ||||| ||||||||||| |||||||||||||| | |
|
|
| T |
42171513 |
caggccttgatgctagagccgctgctattgttatgcggaccgtgagaaatacagtagatacagggagaactgttgtttgcacaattcatcaaccaagcac |
42171414 |
T |
|
| Q |
730 |
tgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|| || || |||||||||||||| |
|
|
| T |
42171413 |
ggatatttttgaagcttttgatga |
42171390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 44 - 282
Target Start/End: Original strand, 39353415 - 39353653
Alignment:
| Q |
44 |
ttagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttt |
143 |
Q |
| |
|
||||| ||||| |||||||| ||||| || || || || ||||||||||| || | ||||| | | ||| ||||| ||||| ||| |||||||||| |
|
|
| T |
39353415 |
ttagttcttttaaagggtgtaagtggagctttcagaccaggtgttctcacggctctgatgggcatcactggtgctggaaaaacaactctaatggatgtgc |
39353514 |
T |
|
| Q |
144 |
tggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtga |
243 |
Q |
| |
|
| ||||||| ||||| ||||| ||||||| |||| ||| | |||||| || || || ||||| |||||||| ||||| |||| ||||| || ||||| |
|
|
| T |
39353515 |
tttctggtagaaaaaccggtggatatattggtgggaacatcacaatttccggctatccaaaaaagcaagaaacctttgcaagaatttctggatactgtga |
39353614 |
T |
|
| Q |
244 |
gcagaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
39353615 |
gcaaactgatatccattctccttatgttactgtctatga |
39353653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 453 - 750
Target Start/End: Complemental strand, 39589094 - 39588797
Alignment:
| Q |
453 |
aatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaac |
552 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||| ||||| | || | | | || || ||||| || || | |||||| || || |
|
|
| T |
39589094 |
aatggttgcagatgttcattgaggaagtcatggagcttgtggagctaaacccgcttagggatgcaattgtcggattgccaggggttagtggtctatcgac |
39588995 |
T |
|
| Q |
553 |
cgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgct |
652 |
Q |
| |
|
|| |||||||| ||| | || |||| ||||| |||||||| ||||| || ||||| |||||||||||||| || || || ||||||| || ||||| |
|
|
| T |
39588994 |
ggagcaacgcaaaaggttgacagttgcagttgagttagtggctaatccttctataatattcatggatgagccaacttcggggctagatgcaagggctgca |
39588895 |
T |
|
| Q |
653 |
gcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttga |
750 |
Q |
| |
|
| ||||||||| || | ||||| |||| || ||||||||||||||| ||||||| ||||||||||| || || ||| | ||||| ||| ||||||| |
|
|
| T |
39588894 |
tctattgttatgagagcagttagaaacatagtggacacaggaagaacaattgtttgtaccattcatcagcccagcattcatatatttgaatcttttga |
39588797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 753
Target Start/End: Complemental strand, 42132786 - 42132581
Alignment:
| Q |
548 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
647 |
Q |
| |
|
||||| |||||| | || ||||| ||||||||||| ||||| || || || || || || || ||||||||||| || || || || | |||||||||| |
|
|
| T |
42132786 |
tcaacagaacaaaggaaaaggcttactattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacatcaggccttgatgctagag |
42132687 |
T |
|
| Q |
648 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttt |
747 |
Q |
| |
|
| ||||| ||||| |||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || |||||||| |
|
|
| T |
42132686 |
ccgctgccattgtgatgcgaactgtgagaaacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatatttttgaagcttt |
42132587 |
T |
|
| Q |
748 |
tgatga |
753 |
Q |
| |
|
|||||| |
|
|
| T |
42132586 |
tgatga |
42132581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 35 - 282
Target Start/End: Original strand, 39365916 - 39366163
Alignment:
| Q |
35 |
gaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaa |
134 |
Q |
| |
|
||||||| ||||| ||| |||||||| ||||||| || || || || ||||||||||| || | ||||| || | || ||||| ||||| ||| | | |
|
|
| T |
39365916 |
gaggataagttagttcttctgaagggtcttagtggagctttcagaccaggtgttctcacggctctgatgggtgtgaccggtgctggcaaaacaactctga |
39366015 |
T |
|
| Q |
135 |
tggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctgg |
234 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||||| |||| ||| | ||| ||||| || || || || |||||||| ||||| |||| ||||| |
|
|
| T |
39366016 |
tggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatatctggctatccaaagaagcaagaaacctttgcaagaatttctgg |
39366115 |
T |
|
| Q |
235 |
ttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
|| || ||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
39366116 |
atactgcgagcaaactgatatccattctcctcatgttactgtctatga |
39366163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 50 - 285
Target Start/End: Complemental strand, 39575333 - 39575098
Alignment:
| Q |
50 |
cttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctg |
149 |
Q |
| |
|
|||||||| ||||| || || || |||||||| |||||||||||||| | ||||| || | ||| ||||| ||||| ||||| |||||||| | |||| |
|
|
| T |
39575333 |
cttttgaacggtgtcagcggagcttttaggccaggtgttctcactgcacttatgggtgtcactggtgctggcaaaacaactttgatggatgtacttgctg |
39575234 |
T |
|
| Q |
150 |
gtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaa |
249 |
Q |
| |
|
||||||||| ||| || |||||| |||| ||| | | |||| ||| | || ||||| |||||||| ||||| |||| || || || |||||||| || |
|
|
| T |
39575233 |
gtaggaaaagtgggggatatattagtgggaacatcacagtttccgggcatcccaaaaagcaagaaacctttgcaagaatttccggatactgtgagcaaaa |
39575134 |
T |
|
| Q |
250 |
tgatatccattctcctcatgttactgtctatgagtc |
285 |
Q |
| |
|
|||||| || ||||||||| |||| ||||||||||| |
|
|
| T |
39575133 |
tgatatacactctcctcatattacggtctatgagtc |
39575098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 462 - 753
Target Start/End: Original strand, 39353792 - 39354083
Alignment:
| Q |
462 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
561 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| || || ||| || |||| | || || || | |||||||| ||||| |||| || || || |
|
|
| T |
39353792 |
agatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcgaaatgcattagtaggacttcctggtgtttgcggtctctcaatggagcagcg |
39353891 |
T |
|
| Q |
562 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
661 |
Q |
| |
|
||| ||||| ||| |||| ||||| || || || ||||| || ||||| ||||||||||| || || ||||| ||||||| || ||||| ||| |||| |
|
|
| T |
39353892 |
caaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgaaccaacttctgggctagatgcaagggctgcagcagttgtg |
39353991 |
T |
|
| Q |
662 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
||| |||| ||||| ||||| || || |||||||||||||||||||| || || || || || || ||||| ||||| ||| |||||||||| |
|
|
| T |
39353992 |
atgagaacagttagaaacacagtagatacaggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatga |
39354083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 440 - 717
Target Start/End: Complemental strand, 39574639 - 39574362
Alignment:
| Q |
440 |
tttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtga |
539 |
Q |
| |
|
|||||| |||| ||||||| ||||||| |||||||||||||||| ||||||||| | ||||||||||| | | | |||||| | || ||| | | |
|
|
| T |
39574639 |
tttggagctgaccaatggttacagatgtttgttgaggaagtcatggagctagtggagttgaacccattgagggatgcatatgttggtctcccaggtatta |
39574540 |
T |
|
| Q |
540 |
atggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattaga |
639 |
Q |
| |
|
| ||||| ||||| || || || || || | |||||||| |||||| | ||| ||||| || || || |||||||||||||| || ||||| ||||| |
|
|
| T |
39574539 |
acggtctatcaactgagcagcgtaaaagattgactattgcagttgaactggtgtgtaatccttctatcatattcatggatgagccaacttctgggttaga |
39574440 |
T |
|
| Q |
640 |
tgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattca |
717 |
Q |
| |
|
||| |||||||| || ||||||||| || | |||||||||| || ||||| ||||||||| |||| || |||||||| |
|
|
| T |
39574439 |
tgcaagagctgcagctattgttatgagagcagttaggaacatagtggacactggaagaacaattgtgtgtaccattca |
39574362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 39538188 - 39538053
Alignment:
| Q |
147 |
ctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagca |
246 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||| ||| | ||||||||| || || || || ||||| || ||||| |||| || || || |||||||| |
|
|
| T |
39538188 |
ctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttcaggatactgtgagca |
39538089 |
T |
|
| Q |
247 |
gaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||| |
|
|
| T |
39538088 |
aactgatatccattctccttatgttactgtctatga |
39538053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 282
Target Start/End: Complemental strand, 42133195 - 42133047
Alignment:
| Q |
134 |
atggatgttttggctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctg |
233 |
Q |
| |
|
|||||||| || || || || ||||| ||||| |||||||| || || || || || ||||| ||||| || || ||| ||| ||||||||| || || |
|
|
| T |
42133195 |
atggatgtattagccggaagaaaaacaggtggatatattgaaggaagtattaacatctctggttacccaaagaaccaaacaacatttgctcgagtcagtg |
42133096 |
T |
|
| Q |
234 |
gttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||| ||||||||||| |
|
|
| T |
42133095 |
gttattgtgagcaaaatgatattcattctccctatgtaactgtctatga |
42133047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 42171890 - 42171834
Alignment:
| Q |
232 |
tggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcact |
288 |
Q |
| |
|
|||||| || || ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
42171890 |
tggttactgcgaacagaatgatattcattctcctcatgttactgtctatgaatcact |
42171834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 285
Target Start/End: Complemental strand, 1084984 - 1084844
Alignment:
| Q |
147 |
ctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccc-taaaaaa-caagaaacgtttgctcgaatctctggttattgtgag |
244 |
Q |
| |
|
||||||| ||||||| ||| ||||||| |||| ||| | ||||||||| || || || |||| |||||||| ||| | |||| ||||| || |||||| |
|
|
| T |
1084984 |
ctggtagaaaaactgatggatatattggtgggaacatcataatttctggctatccatagaaaagcaagaaacatttacaagaatttctggatactgtgag |
1084885 |
T |
|
| Q |
245 |
cagaatgatatccattctcctcatgttactgtctatgagtc |
285 |
Q |
| |
|
|| | |||||||||||||||||| |||||||||| ||||| |
|
|
| T |
1084884 |
caaatagatatccattctcctcattttactgtctacgagtc |
1084844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 521 - 753
Target Start/End: Original strand, 49773508 - 49773740
Alignment:
| Q |
521 |
gttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatg |
620 |
Q |
| |
|
||||| || ||||||||||||||||| || || ||||| ||||||||| |||| ||||| |||||| | || ||||||||||| || || |||||||||| |
|
|
| T |
49773508 |
gttggattacctggtgtgaatggtctgtccacagaacagcgcaagaggttaacgattgcagttgaacttgttgccaatccatctattatattcatggatg |
49773607 |
T |
|
| Q |
621 |
agcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatca |
720 |
Q |
| |
|
| ||||| ||||| | ||||| ||||||||||| || || ||| |||| || ||||| || || |||||||| ||||| ||||| ||||| |||||||| |
|
|
| T |
49773608 |
aacctacctctggccttgatgcaagagctgctgctatagtaatgagaacagtgaggaatacagtggacacagggagaactgttgtctgcacaattcatca |
49773707 |
T |
|
| Q |
721 |
accaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|| |||||||| ||||| || ||||||||||| |
|
|
| T |
49773708 |
gcctagtattgatatatttgatgcttttgatga |
49773740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 605 - 753
Target Start/End: Complemental strand, 25522972 - 25522824
Alignment:
| Q |
605 |
ataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttg |
704 |
Q |
| |
|
||||| ||||||||||| ||||| || ||| | ||||| | || ||||| ||||||||| |||| ||| | || || ||||| || |||||||| || | |
|
|
| T |
25522972 |
ataatcttcatggatgaacctacctccggacttgatgcacgtgccgctgccattgttatgagaactgttcgcaatactgttgatactggaagaactgtgg |
25522873 |
T |
|
| Q |
705 |
tttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||| ||||| ||||| ||||||||||| ||||| ||||| |||||||| |
|
|
| T |
25522872 |
tttgtaccatacatcagccaagtattgatatatttgaagcatttgatga |
25522824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 753
Target Start/End: Complemental strand, 12717123 - 12717008
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
||||||||||| ||||| ||||| ||| |||| || || ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
12717123 |
gatgctagagccgctgctattgtgatgtgaactgtgagaaacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattt |
12717024 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
12717023 |
tttaagcttttgatga |
12717008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 49773210 - 49773298
Alignment:
| Q |
194 |
gggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
282 |
Q |
| |
|
||||||||||| || |||||||| ||| |||| || || || || |||||||| | ||||||||| ||||| ||||||||||||||||| |
|
|
| T |
49773210 |
gggtaccctaagaagcaagaaacattttctcggatatcaggatactgtgagcaaactgatatccactctccccatgttactgtctatga |
49773298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 51; Significance: 8e-20; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 611 - 753
Target Start/End: Original strand, 4501718 - 4501860
Alignment:
| Q |
611 |
ttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgca |
710 |
Q |
| |
|
|||||||||||||| || ||||| ||||||| ||||| ||||| ||||||||| | || || || ||||| ||||| || |||||||||||||| |||| |
|
|
| T |
4501718 |
ttcatggatgagccaacttctggtctagatgcaagagcagctgctattgttatgaggactgtaagaaacactgttgatactggaagaacagttgtgtgca |
4501817 |
T |
|
| Q |
711 |
ccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||| || ||||| || || ||||| |||||||| |
|
|
| T |
4501818 |
caattcatcaacctagcattgatatctttgaagcctttgatga |
4501860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 74 - 274
Target Start/End: Original strand, 4501168 - 4501368
Alignment:
| Q |
74 |
tttaggcctggtgttctcactgccttaatgggagttagtggagctggtaaaactactttaatggatgttttggctggtaggaaaactggtggttatattg |
173 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||||||||||| || || || || ||||||||||||||||| || || || || |||||||| || |||| |
|
|
| T |
4501168 |
tttaggcctggagttcttactgcactaatgggagttagtggtgccgggaagacaactttaatggatgttttagcaggaagaaagactggtggctacattg |
4501267 |
T |
|
| Q |
174 |
acgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttac |
273 |
Q |
| |
|
| || | | ||| ||||| |||||||| || |||||||| ||||| || | |||||||||||||| || | |||||| ||||| ||||| ||||| |
|
|
| T |
4501268 |
aaggagatgttagaatctctggataccctaagaaccaagaaacctttgcaagagtttctggttattgtgaacaaactgatattcattcacctcaagttac |
4501367 |
T |
|
| Q |
274 |
t |
274 |
Q |
| |
|
| |
|
|
| T |
4501368 |
t |
4501368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 725
Target Start/End: Original strand, 43530787 - 43530874
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaa |
725 |
Q |
| |
|
|||||||||||||| ||| | |||||||| || ||||| ||||| |||| ||||| ||||| ||||| ||||| ||||||||||||| |
|
|
| T |
43530787 |
gatgctagagctgcagcagtagttatgcgtactgttagaaacacagttgttacagggagaactgttgtgtgcacaattcatcaaccaa |
43530874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 753
Target Start/End: Complemental strand, 31383161 - 31383046
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||| | || ||||| | |||||||||||||| |||| ||||| ||||| ||||||| ||||| || | |
|
|
| T |
31383161 |
gatgctagagttgctgctattgtgatgcgaactatgagaaacacaatagacacaggaagaactattgtgtgcacaattcaccaaccaaacattgatattt |
31383062 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
31383061 |
tttaagcttttgatga |
31383046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 638 - 753
Target Start/End: Original strand, 8802 - 8917
Alignment:
| Q |
638 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
737 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| || || ||||| || |||||||| |||| ||||| ||||| ||||| |||||||||||||| || | |
|
|
| T |
8802 |
gatgctagagctgctgctattgtgatgcgaactgtgagaaacacagtagacacagggagaaatgttgtgtgcacaattcaccaaccaagtattgatattt |
8901 |
T |
|
| Q |
738 |
tcgaagcttttgatga |
753 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
8902 |
tttaagcttttgatga |
8917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 602 - 753
Target Start/End: Original strand, 29777435 - 29777586
Alignment:
| Q |
602 |
tccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacag |
701 |
Q |
| |
|
||||| ||||| ||||| |||||||| |||||| | |||||| | || || || || ||||||||||| ||| | ||||| ||||| || |||||||| | |
|
|
| T |
29777435 |
tccattatttttatggacgagcctacatctggacttgatgctcgtgccgcagctatcgttatgcgaactgttcgcaacactgttgatactggaagaactg |
29777534 |
T |
|
| Q |
702 |
ttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
753 |
Q |
| |
|
|||| || ||||| ||||||||||||||||| || || ||||| |||||||| |
|
|
| T |
29777535 |
ttgtctgtaccatacatcaaccaagtattgatatttttgaagcatttgatga |
29777586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 753
Target Start/End: Complemental strand, 10901823 - 10901720
Alignment:
| Q |
650 |
gctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttg |
749 |
Q |
| |
|
||||| ||||| ||| |||| || || ||||| || |||||||||||||| ||||| ||||| ||||| |||||||| ||||| || || ||||||||| |
|
|
| T |
10901823 |
gctgctattgtgatgtgaactgtgagaaacacagtagacacaggaagaactgttgtgtgcacaattcaccaaccaagcattgatattttttaagcttttg |
10901724 |
T |
|
| Q |
750 |
atga |
753 |
Q |
| |
|
|||| |
|
|
| T |
10901723 |
atga |
10901720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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