View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17145_high_2 (Length: 804)

Name: NF17145_high_2
Description: NF17145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17145_high_2
NF17145_high_2
[»] chr8 (42 HSPs)
chr8 (260-541)||(46267-46546)
chr8 (3-159)||(46622-46778)
chr8 (601-768)||(31957884-31958051)
chr8 (293-539)||(38387706-38387956)
chr8 (603-768)||(2146786-2146951)
chr8 (601-768)||(35966579-35966746)
chr8 (601-768)||(41744549-41744717)
chr8 (650-768)||(20546894-20547012)
chr8 (602-768)||(1114820-1114987)
chr8 (601-768)||(7340144-7340310)
chr8 (603-768)||(18205865-18206029)
chr8 (603-766)||(43369859-43370022)
chr8 (601-768)||(30305399-30305565)
chr8 (601-768)||(32378751-32378917)
chr8 (601-768)||(32432706-32432872)
chr8 (603-766)||(39752854-39753018)
chr8 (294-539)||(1578935-1579176)
chr8 (618-768)||(8423663-8423812)
chr8 (603-695)||(45454459-45454551)
chr8 (673-768)||(43689830-43689925)
chr8 (603-765)||(22577744-22577904)
chr8 (601-768)||(4866511-4866678)
chr8 (603-690)||(35389587-35389674)
chr8 (555-603)||(20546785-20546833)
chr8 (700-754)||(45454579-45454633)
chr8 (558-603)||(31957769-31957814)
chr8 (557-603)||(35966842-35966888)
chr8 (557-603)||(41744787-41744833)
chr8 (684-768)||(22657243-22657327)
chr8 (555-602)||(26451418-26451465)
chr8 (557-603)||(1114677-1114723)
chr8 (442-508)||(40531176-40531241)
chr8 (557-603)||(45454340-45454386)
chr8 (15-59)||(24915949-24915993)
chr8 (307-363)||(31180044-31180098)
chr8 (557-605)||(34234517-34234565)
chr8 (557-605)||(44052317-44052365)
chr8 (555-602)||(22550958-22551005)
chr8 (457-539)||(544393-544474)
chr8 (556-602)||(41276954-41277000)
chr8 (478-539)||(4489767-4489828)
chr8 (557-602)||(41250165-41250210)
[»] chr3 (50 HSPs)
chr3 (296-539)||(17324200-17324443)
chr3 (293-539)||(16284860-16285104)
chr3 (601-768)||(14398611-14398776)
chr3 (601-768)||(36817352-36817518)
chr3 (601-768)||(48250698-48250866)
chr3 (307-539)||(45181401-45181632)
chr3 (601-768)||(46993060-46993227)
chr3 (604-768)||(2745059-2745225)
chr3 (601-768)||(7842843-7843013)
chr3 (601-768)||(13747550-13747715)
chr3 (602-768)||(23442961-23443128)
chr3 (601-768)||(9429677-9429845)
chr3 (601-765)||(50953352-50953519)
chr3 (603-765)||(7837674-7837836)
chr3 (603-768)||(29929505-29929670)
chr3 (603-768)||(29978659-29978824)
chr3 (601-768)||(30947483-30947649)
chr3 (618-768)||(6740955-6741106)
chr3 (601-768)||(8160825-8160991)
chr3 (606-768)||(16444677-16444841)
chr3 (601-759)||(3948806-3948963)
chr3 (603-768)||(6505805-6505971)
chr3 (601-768)||(21956033-21956201)
chr3 (307-538)||(2782113-2782343)
chr3 (682-768)||(9582655-9582741)
chr3 (629-695)||(11389568-11389634)
chr3 (436-535)||(3968597-3968695)
chr3 (436-535)||(4000110-4000208)
chr3 (557-603)||(41137652-41137698)
chr3 (555-603)||(49217043-49217091)
chr3 (556-603)||(36817614-36817661)
chr3 (556-603)||(23443199-23443246)
chr3 (603-690)||(28611008-28611094)
chr3 (618-709)||(29918229-29918320)
chr3 (618-709)||(29967382-29967473)
chr3 (555-602)||(50216948-50216995)
chr3 (555-603)||(7841053-7841101)
chr3 (557-605)||(43478921-43478969)
chr3 (557-603)||(7843110-7843156)
chr3 (557-605)||(1388195-1388243)
chr3 (556-604)||(26245269-26245317)
chr3 (557-605)||(43476125-43476173)
chr3 (556-595)||(48250970-48251009)
chr3 (557-588)||(54964971-54965002)
chr3 (557-587)||(34694543-34694573)
chr3 (557-603)||(49219884-49219930)
chr3 (556-605)||(5136519-5136568)
chr3 (556-605)||(46993262-46993311)
chr3 (555-588)||(51693821-51693854)
chr3 (557-602)||(51696609-51696654)
[»] chr5 (50 HSPs)
chr5 (601-768)||(1035260-1035427)
chr5 (601-768)||(25896910-25897076)
chr5 (601-768)||(27867676-27867842)
chr5 (601-766)||(28387345-28387510)
chr5 (602-768)||(34123750-34123918)
chr5 (601-768)||(34077844-34078010)
chr5 (601-768)||(7021714-7021880)
chr5 (601-768)||(37820711-37820876)
chr5 (601-768)||(28886249-28886415)
chr5 (603-768)||(31098763-31098929)
chr5 (601-768)||(13567931-13568097)
chr5 (342-539)||(35846938-35847136)
chr5 (603-768)||(7800816-7800981)
chr5 (603-768)||(38860031-38860197)
chr5 (374-539)||(42742379-42742543)
chr5 (601-760)||(14279901-14280059)
chr5 (603-768)||(11033292-11033457)
chr5 (603-768)||(4204039-4204205)
chr5 (603-768)||(33993359-33993523)
chr5 (338-539)||(29685664-29685864)
chr5 (392-539)||(3204171-3204321)
chr5 (403-539)||(2706963-2707099)
chr5 (307-538)||(25341507-25341735)
chr5 (472-539)||(39368833-39368900)
chr5 (603-768)||(18538163-18538329)
chr5 (293-404)||(39368707-39368815)
chr5 (711-768)||(34944026-34944083)
chr5 (556-603)||(25897172-25897219)
chr5 (687-768)||(21999215-21999297)
chr5 (557-603)||(39743241-39743287)
chr5 (442-539)||(18557479-18557574)
chr5 (603-768)||(30354227-30354390)
chr5 (556-603)||(27867913-27867960)
chr5 (545-603)||(34122444-34122504)
chr5 (558-603)||(34124028-34124073)
chr5 (557-602)||(38407133-38407178)
chr5 (604-663)||(21979646-21979704)
chr5 (560-602)||(1397444-1397486)
chr5 (609-768)||(20285094-20285253)
chr5 (557-603)||(41798752-41798798)
chr5 (549-602)||(30887454-30887507)
chr5 (556-604)||(14754-14802)
chr5 (557-605)||(2532020-2532068)
chr5 (554-585)||(42942562-42942593)
chr5 (557-603)||(1035118-1035164)
chr5 (555-605)||(13568166-13568216)
chr5 (557-603)||(17966979-17967025)
chr5 (555-605)||(35777106-35777156)
chr5 (554-604)||(37820939-37820989)
chr5 (556-602)||(41799861-41799907)
[»] scaffold0116 (2 HSPs)
scaffold0116 (601-768)||(11351-11517)
scaffold0116 (557-603)||(11235-11281)
[»] chr2 (51 HSPs)
chr2 (293-539)||(4397473-4397716)
chr2 (618-768)||(27276205-27276357)
chr2 (628-768)||(24749752-24749894)
chr2 (312-539)||(37128966-37129192)
chr2 (601-768)||(1100908-1101074)
chr2 (603-768)||(24607407-24607573)
chr2 (601-768)||(3803397-3803566)
chr2 (601-768)||(7263093-7263262)
chr2 (601-768)||(38945813-38945980)
chr2 (603-768)||(39794041-39794207)
chr2 (603-768)||(435421-435587)
chr2 (603-768)||(41008756-41008922)
chr2 (606-768)||(43950073-43950235)
chr2 (601-768)||(18003102-18003268)
chr2 (601-737)||(41183083-41183220)
chr2 (621-768)||(1149552-1149705)
chr2 (601-768)||(41560081-41560248)
chr2 (601-768)||(10624295-10624461)
chr2 (603-768)||(41053397-41053562)
chr2 (618-768)||(9651259-9651410)
chr2 (601-768)||(213282-213448)
chr2 (603-695)||(20950973-20951067)
chr2 (603-768)||(19187051-19187217)
chr2 (368-521)||(41958099-41958253)
chr2 (705-768)||(5335041-5335104)
chr2 (687-768)||(34921599-34921681)
chr2 (311-515)||(42048283-42048486)
chr2 (557-603)||(1149406-1149452)
chr2 (442-524)||(44888377-44888458)
chr2 (601-711)||(5334639-5334748)
chr2 (558-602)||(29090544-29090588)
chr2 (704-768)||(12908256-12908322)
chr2 (720-767)||(45475609-45475656)
chr2 (473-539)||(23665447-23665513)
chr2 (557-603)||(27276467-27276513)
chr2 (556-602)||(34639408-34639454)
chr2 (711-759)||(23001032-23001080)
chr2 (557-605)||(23346715-23346763)
chr2 (556-603)||(1096528-1096575)
chr2 (603-662)||(45475519-45475577)
chr2 (557-603)||(1101145-1101191)
chr2 (557-603)||(7262970-7263016)
chr2 (554-604)||(20951137-20951187)
chr2 (557-603)||(24749620-24749666)
chr2 (556-605)||(43870212-43870261)
chr2 (557-605)||(3943282-3943330)
chr2 (557-605)||(28137791-28137839)
chr2 (557-604)||(7190042-7190089)
chr2 (557-604)||(29074094-29074141)
chr2 (711-768)||(34910121-34910179)
chr2 (438-539)||(4162063-4162162)
[»] chr1 (61 HSPs)
chr1 (601-766)||(23913907-23914071)
chr1 (301-539)||(38709754-38709990)
chr1 (601-798)||(44465647-44465842)
chr1 (294-539)||(4391404-4391645)
chr1 (601-768)||(29356522-29356687)
chr1 (601-768)||(41453889-41454054)
chr1 (601-768)||(50117604-50117774)
chr1 (601-765)||(15047359-15047522)
chr1 (603-768)||(37014970-37015136)
chr1 (601-768)||(5077991-5078160)
chr1 (601-768)||(6561990-6562158)
chr1 (602-768)||(30905822-30905989)
chr1 (601-768)||(20349508-20349674)
chr1 (601-768)||(31945691-31945857)
chr1 (603-768)||(22397872-22398038)
chr1 (603-768)||(44620945-44621112)
chr1 (601-768)||(3948292-3948458)
chr1 (601-768)||(38775956-38776122)
chr1 (606-768)||(13629473-13629637)
chr1 (603-765)||(8459931-8460091)
chr1 (397-521)||(39908882-39909006)
chr1 (603-766)||(1654823-1654987)
chr1 (601-768)||(3983164-3983330)
chr1 (603-768)||(22345339-22345502)
chr1 (603-768)||(19498940-19499106)
chr1 (603-768)||(46973282-46973446)
chr1 (603-693)||(9711555-9711645)
chr1 (603-747)||(19054100-19054244)
chr1 (338-539)||(38564743-38564939)
chr1 (603-768)||(4516084-4516248)
chr1 (436-535)||(13987557-13987655)
chr1 (705-768)||(13174018-13174081)
chr1 (549-603)||(9711744-9711798)
chr1 (700-768)||(36076390-36076458)
chr1 (705-768)||(21944206-21944269)
chr1 (556-603)||(23913790-23913837)
chr1 (555-603)||(37014882-37014930)
chr1 (555-603)||(44465528-44465576)
chr1 (556-603)||(6562254-6562301)
chr1 (555-596)||(29438120-29438161)
chr1 (603-694)||(7981043-7981133)
chr1 (554-605)||(26944410-26944461)
chr1 (555-602)||(52805627-52805674)
chr1 (557-603)||(5077875-5077921)
chr1 (555-605)||(46320544-46320594)
chr1 (555-605)||(50117904-50117954)
chr1 (555-596)||(21144704-21144745)
chr1 (557-602)||(27487730-27487775)
chr1 (556-605)||(46886478-46886527)
chr1 (700-768)||(16247557-16247625)
chr1 (557-605)||(20114539-20114587)
chr1 (557-605)||(32161383-32161431)
chr1 (557-601)||(44336187-44336231)
chr1 (556-603)||(30905704-30905751)
chr1 (555-605)||(253368-253418)
chr1 (556-594)||(471165-471203)
chr1 (553-603)||(48751503-48751553)
chr1 (555-605)||(51271682-51271732)
chr1 (556-605)||(94343-94392)
chr1 (556-605)||(15354649-15354698)
chr1 (556-605)||(29765620-29765669)
[»] scaffold0361 (2 HSPs)
scaffold0361 (601-768)||(4230-4397)
scaffold0361 (556-603)||(4493-4540)
[»] chr7 (34 HSPs)
chr7 (601-768)||(29593184-29593351)
chr7 (601-768)||(47741814-47741981)
chr7 (601-768)||(18105450-18105617)
chr7 (601-768)||(618580-618747)
chr7 (300-539)||(2569961-2570198)
chr7 (603-768)||(42499487-42499654)
chr7 (603-768)||(47061005-47061171)
chr7 (601-768)||(30786602-30786768)
chr7 (601-766)||(43623978-43624142)
chr7 (601-768)||(43033051-43033217)
chr7 (601-768)||(45763457-45763623)
chr7 (609-768)||(10708110-10708269)
chr7 (717-768)||(36185987-36186038)
chr7 (557-603)||(29593421-29593467)
chr7 (546-603)||(43686941-43686998)
chr7 (436-539)||(46262162-46262264)
chr7 (713-768)||(15059793-15059848)
chr7 (436-539)||(27993579-27993681)
chr7 (457-539)||(6003331-6003412)
chr7 (442-537)||(35206738-35206832)
chr7 (557-602)||(46740634-46740679)
chr7 (557-602)||(48829897-48829942)
chr7 (557-603)||(34142693-34142739)
chr7 (557-603)||(42499343-42499389)
chr7 (555-605)||(46738734-46738784)
chr7 (557-603)||(47741714-47741760)
chr7 (557-605)||(46740584-46740632)
chr7 (557-596)||(5537800-5537839)
chr7 (557-604)||(13921355-13921402)
chr7 (554-604)||(28564626-28564676)
chr7 (555-605)||(40323200-40323250)
chr7 (556-602)||(40587607-40587653)
chr7 (555-604)||(27656971-27657020)
chr7 (565-602)||(34139839-34139876)
[»] chr4 (46 HSPs)
chr4 (295-539)||(26500318-26500565)
chr4 (293-539)||(1798945-1799184)
chr4 (604-768)||(19073483-19073649)
chr4 (601-768)||(15999627-15999796)
chr4 (632-768)||(3403908-3404043)
chr4 (603-768)||(4975844-4976009)
chr4 (603-768)||(9890072-9890239)
chr4 (603-768)||(11494622-11494787)
chr4 (603-768)||(44049177-44049342)
chr4 (601-768)||(49566305-49566471)
chr4 (604-768)||(41023465-41023629)
chr4 (601-768)||(1087910-1088079)
chr4 (603-768)||(4768731-4768896)
chr4 (294-539)||(10388361-10388599)
chr4 (603-768)||(13173312-13173476)
chr4 (603-768)||(21470982-21471146)
chr4 (603-768)||(3449908-3450074)
chr4 (603-768)||(18581161-18581326)
chr4 (603-768)||(38464598-38464760)
chr4 (607-768)||(4979752-4979907)
chr4 (338-539)||(17416552-17416753)
chr4 (601-768)||(17139675-17139848)
chr4 (341-453)||(23040631-23040744)
chr4 (338-539)||(37707398-37707596)
chr4 (345-539)||(40813824-40814017)
chr4 (687-768)||(30042605-30042686)
chr4 (601-768)||(24417247-24417413)
chr4 (603-768)||(51644328-51644493)
chr4 (557-603)||(56138181-56138227)
chr4 (554-603)||(19073732-19073781)
chr4 (557-602)||(50278892-50278937)
chr4 (687-763)||(8361860-8361936)
chr4 (555-603)||(9889926-9889974)
chr4 (557-605)||(44674099-44674147)
chr4 (557-605)||(51492006-51492054)
chr4 (556-603)||(37394181-37394228)
chr4 (554-588)||(56304808-56304842)
chr4 (566-603)||(56140725-56140762)
chr4 (557-605)||(16983456-16983504)
chr4 (572-603)||(37395285-37395316)
chr4 (557-603)||(1044612-1044658)
chr4 (555-585)||(9491364-9491394)
chr4 (555-605)||(16984252-16984302)
chr4 (556-602)||(50274693-50274739)
chr4 (557-590)||(1041869-1041902)
chr4 (555-604)||(26792336-26792385)
[»] chr6 (22 HSPs)
chr6 (601-768)||(18347092-18347259)
chr6 (603-768)||(7363145-7363311)
chr6 (601-768)||(28249962-28250127)
chr6 (618-768)||(2052458-2052606)
chr6 (603-768)||(31146452-31146620)
chr6 (601-735)||(13388572-13388704)
chr6 (610-768)||(18606130-18606289)
chr6 (601-768)||(1612577-1612743)
chr6 (619-766)||(7361256-7361404)
chr6 (603-764)||(23985841-23986001)
chr6 (601-768)||(24218096-24218260)
chr6 (705-768)||(26701999-26702062)
chr6 (628-768)||(2260175-2260315)
chr6 (433-539)||(7546472-7546577)
chr6 (338-508)||(12129058-12129225)
chr6 (555-605)||(14012465-14012515)
chr6 (557-602)||(117928-117973)
chr6 (554-590)||(31768684-31768720)
chr6 (557-604)||(32691085-32691132)
chr6 (611-649)||(13479790-13479828)
chr6 (556-605)||(11687392-11687441)
chr6 (556-605)||(11687983-11688032)
[»] scaffold0494 (3 HSPs)
scaffold0494 (601-768)||(933-1102)
scaffold0494 (557-603)||(765-811)
scaffold0494 (554-604)||(11545-11595)
[»] scaffold0038 (1 HSPs)
scaffold0038 (601-768)||(50124-50289)
[»] scaffold0341 (2 HSPs)
scaffold0341 (601-768)||(17180-17348)
scaffold0341 (556-603)||(17444-17491)
[»] scaffold0219 (1 HSPs)
scaffold0219 (603-768)||(15756-15920)
[»] scaffold0260 (1 HSPs)
scaffold0260 (601-768)||(11831-11997)
[»] scaffold0794 (1 HSPs)
scaffold0794 (601-737)||(5348-5485)
[»] scaffold0744 (1 HSPs)
scaffold0744 (601-768)||(251-420)
[»] scaffold0340 (1 HSPs)
scaffold0340 (603-768)||(1011-1175)
[»] scaffold0147 (1 HSPs)
scaffold0147 (603-768)||(689-855)
[»] scaffold0360 (1 HSPs)
scaffold0360 (628-768)||(7144-7283)
[»] scaffold0057 (1 HSPs)
scaffold0057 (705-768)||(23072-23135)
[»] scaffold0388 (1 HSPs)
scaffold0388 (633-766)||(11574-11706)
[»] scaffold0176 (2 HSPs)
scaffold0176 (557-603)||(3618-3664)
scaffold0176 (565-602)||(764-801)
[»] scaffold2089 (1 HSPs)
scaffold2089 (601-649)||(287-336)
[»] scaffold0184 (1 HSPs)
scaffold0184 (557-602)||(17965-18010)
[»] scaffold0078 (1 HSPs)
scaffold0078 (557-602)||(54834-54879)


Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 260 - 541
Target Start/End: Complemental strand, 46546 - 46267
Alignment:
Q  260 aatgagaaagaaaagaagattttgctttatcaatgtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgt 359  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46546 aatgagaaagaaaagaagattttgctttatcaatgtgcgcc---ctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgt 46450  T
Q  360 gttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttatgt 458  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46449 gttcgagccggttcgctttgtgctactgttccgcctattctttgtctttggattttgacatcgggttattggtgggtcgagtttttggacaggtttatgt 46350  T
Q  459 gtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattcca 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46349 gtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattcca 46267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 46778 - 46622
Alignment:
Q  3 gcgccttgcttatatatgcctaatataatatacatagcatagttgggggataccatgatccacccctagttcttctaacaaaaactaaaccaaatgaagt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46778 gcgccttgcttatatatgcctaatataatatacatagcatagttgggggatgccatgatccacccctagttcttctaacaaaaactaaaccaaatgaagt 46679  T
Q  103 gaattggactccaatctctagcaaactaatttgccacttcttcaaccaatgggagag 159  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46678 gaattggactccaatctatagcaaactaatttgccacttcttcaaccaatgggagag 46622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 31957884 - 31958051
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || |    
T  31957884 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttcccctccattcaatcccaaaatccaatatttt 31957983  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31957984 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 31958051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 293 - 539
Target Start/End: Original strand, 38387706 - 38387956
Alignment:
Q  293 tgtgcgccggtctattcaagtggtggtgatgcaggttgatttgg----ttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgt 388  Q
    |||||||||||||||| | ||||||||  ||||||||| |||||    |||  |||||||| ||||||||||||||||| |||||||||||  ||| |||    
T  38387706 tgtgcgccggtctatttaggtggtggtcttgcaggttggtttggtggcttgttttgttttgttttgtttgtgttcgagctggttcgctttgcactattgt 38387805  T
Q  389 tccgactattctctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgagg 487  Q
    |||   | |||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||    
T  38387806 tccccattttctctatctttggattttgccatcaggttattggtgggtcgagtttttggacaggttaaggtgtttgctctggt-ggttcgtgagttgagg 38387904  T
Q  488 ggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  38387905 ggtgcctttttgacttatgtcgggagtcttgtgggccaatcacttttgattc 38387956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 2146951 - 2146786
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| || |||    
T  2146951 atgtttcattagatgaaacagccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttttt 2146852  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2146851 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 2146786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 35966746 - 35966579
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaa-tcccaaaatccaattttc 699  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| ||     
T  35966746 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcattttcacctccattcaattccaaaaatccaatatt- 35966648  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  35966647 tttttatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttaacgt 35966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 41744717 - 41744549
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttc 699  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| |||     
T  41744717 aaatgtttcatcagatgaaacagccacatgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaatccaatatttt 41744618  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  41744617 ttttcatcaattcttaatctaaaatcattcaagcatcaagcataggaggtatcaacatacttttgacgt 41744549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 650 - 768
Target Start/End: Original strand, 20546894 - 20547012
Alignment:
Q  650 tcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggt 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20546894 tcttcatcaacttcatttccacctccattcaatcccaaaatccaatttttttttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggt 20546993  T
Q  750 atcaacacacttttgacgt 768  Q
    ||||| |||||||||||||    
T  20546994 atcaatacacttttgacgt 20547012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 602 - 768
Target Start/End: Original strand, 1114820 - 1114987
Alignment:
Q  602 aatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaattttc 699  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||| ||     
T  1114820 aatgtttcatcagatgaaacagccacctgctcccc-tacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatattt 1114918  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1114919 tttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 1114987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 7340144 - 7340310
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  7340144 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 7340241  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  7340242 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 7340310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 18205865 - 18206029
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||  | |||| ||||| ||| ||| ||||||||| || |||    
T  18205865 atgtttcatcagatgaaacagccacctgctccccctacacactattt-catcatcaacttccataccacttccatccaaaccccaaatccaatatttttt 18205963  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18205964 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtattaacacacttttgacgt 18206029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 766
Target Start/End: Original strand, 43369859 - 43370022
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||| ||||||||| |||||| || |||||| ||||| | ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| || |||    
T  43369859 atgtctcatcagatgaaacagtcacctgctctccctatatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttttt 43369958  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    | | ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  43369959 tcaacaaatcttgatccaaaatcattcaagcatgaagcataggaggtatcaacacacttttgac 43370022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 30305565 - 30305399
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  30305565 aaatgtttcatctgatgaaacaactacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 30305468  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30305467 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 30305399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 32378917 - 32378751
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  32378917 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 32378820  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  32378819 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 32378751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 32432872 - 32432706
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  32432872 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 32432775  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  32432774 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 32432706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 603 - 766
Target Start/End: Complemental strand, 39753018 - 39752854
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| |||||   | ||  |||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| ||| ||    
T  39753018 atgtttcatcagatgaaacatatacctattccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttttt 39752919  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    || ||||| |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39752918 ttcatcaaatcttgatctaaaatcattcaagtatcaagcataggaggtatcaacacacttttgac 39752854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 294 - 539
Target Start/End: Original strand, 1578935 - 1579176
Alignment:
Q  294 gtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccga 393  Q
    ||||||||||  ||||  |||||| ||||||||  ||||||||| |||||| |||||   |||||||||||||  | ||||||||| |||||| ||| |     
T  1578935 gtgcgccggttaattcgggtggtgctgatgcagagtgatttggt-ggcttgatttga---gtttgtgttcgagttgattcgctttgcgctactattctgc 1579030  T
Q  394 ctattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgc 492  Q
     | |||||||||||||||||||| ||||| ||| |||| || || || ||||||| ||||||| |||||||||| ||||| ||||||||||||||| |||    
T  1579031 ttgttctctgtctttggattttggcatcgtgttcttggcgggtcaaggttttggataggtttaggtgtctgctctggtgg-ttcgtgagttgagggatgc 1579129  T
Q  493 ctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    || ||| |||||||| |||||||||||||||| ||| ||||||||||    
T  1579130 ctcttttacttgtgttgggagtcttgtgggccgatcacttttgattc 1579176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 618 - 768
Target Start/End: Complemental strand, 8423812 - 8423663
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttcttttaatcaattcttga 716  Q
    ||||||| | ||||||||| |||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||  | ||||||||| ||||    
T  8423812 aaacagctacctgctccccatacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccattttttctataatcaatttttga 8423715  T
Q  717 tccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8423714 tccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 8423663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 603 - 695
Target Start/End: Original strand, 45454459 - 45454551
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat 695  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45454459 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcatttccacctccattcaatccccaaatccaat 45454551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 673 - 768
Target Start/End: Complemental strand, 43689925 - 43689830
Alignment:
Q  673 tccattcaatcccaaaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| ||||||| ||||||||| || |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43689925 tccatccaatccccaaatccaatatttttttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 43689830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 603 - 765
Target Start/End: Original strand, 22577744 - 22577904
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||| | || ||||||||  | |||| ||||| ||| |||||| ||||||  | |||    
T  22577744 atgtttcatcagatgaaacagccacctgctccccccacacactattt-catcgtcaacttccataccacttccatccaaacccaaa-tccaataattttt 22577841  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttga 765  Q
    | ||||| |||||  |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22577842 tcatcaaatcttgcaccaaaatcattcgagcatcaagcataggaggtatcaacacacttttga 22577904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 4866511 - 4866678
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttc 699  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| ||||| | |||| ||||||  | |||| |||||  |||||| ||||||||| |||     
T  4866511 aaatgtttcatcagatgaaacagccacctgttccccctacacaatattt-catcattaacttccataccacttccatctaatccccaaatccaatatttt 4866609  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||| ||||  |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  4866610 ttttcatcaaatctttctccaaaatcattgaagcatcaagcataagagatatcaacacacttttgacgt 4866678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 603 - 690
Target Start/End: Original strand, 35389587 - 35389674
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaat 690  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||    
T  35389587 atgtttcatcagatgaaacaaccatctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaat 35389674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 20546785 - 20546833
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20546785 ttgagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 20546833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 700 - 754
Target Start/End: Original strand, 45454579 - 45454633
Alignment:
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaa 754  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  45454579 tttttatcaattcttgatccaaaatcattcaaacatcaagcataggaggtatcaa 45454633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 31957769 - 31957814
Alignment:
Q  558 agaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  31957769 agaattgttgttcccacatgtgataaggttgtgccacactagtaaa 31957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 35966888 - 35966842
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  35966888 gagaattgttgttcccatatttgataaggttgtgtcacactagtaaa 35966842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 41744833 - 41744787
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  41744833 gagaattgttgttcccacatttgataaagttgtgtcacactagtaaa 41744787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 768
Target Start/End: Original strand, 22657243 - 22657327
Alignment:
Q  684 ccaaaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||| || |||| ||||| |||||  |||||||||||   ||||||  | |||||||||||||||||||||||||||    
T  22657243 ccaaaatccaatatttttttcatcaagtcttgccccaaaatcattggtgcatcaatcctaggaggtatcaacacacttttgacgt 22657327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 555 - 602
Target Start/End: Original strand, 26451418 - 26451465
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  26451418 ttgagaattgttcttcccacatttgataaggttgtggcacacgagtaa 26451465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 1114677 - 1114723
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  1114677 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaa 1114723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 442 - 508
Target Start/End: Original strand, 40531176 - 40531241
Alignment:
Q  442 tttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtc 508  Q
    |||||||||||| | |||||||||| ||||||| | |||||||||||||||| |||||| |||||||    
T  40531176 tttggacaggttaaggtgtctgctctggtgggt-cttgagttgaggggtgccgttttgatttgtgtc 40531241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 45454340 - 45454386
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||    
T  45454340 gagaattgttgttcccacatttgataagactgtggcacactagtaaa 45454386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 24915949 - 24915993
Alignment:
Q  15 tatatgcctaatataatatacatagcatagttgggggataccatg 59  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  24915949 tatatgcctaatataatatatatagcaaagttgggggatgccatg 24915993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 31180098 - 31180044
Alignment:
Q  307 ttcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttc 363  Q
    ||||||||||||||||||||||||||||   |||||||||||| |||||||||||||    
T  31180098 ttcaagtggtggtgatgcaggttgattt-catggcttgttttg-tttgtttgtgttc 31180044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 34234517 - 34234565
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||  |||||||||||||| |||||||||| ||||||||    
T  34234517 gagaattgttgtttacacatttgataaggctgtgccacacgagtaaatg 34234565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 44052365 - 44052317
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  44052365 gagaattgttgttcccacattacataaggttgtggcacacgagtaaatg 44052317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 602
Target Start/End: Complemental strand, 22551005 - 22550958
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||  |||||||||||||| |||||||||| |||||    
T  22551005 ttgagaattgttgtttacacatttgataaggctgtgccacacgagtaa 22550958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 539
Target Start/End: Complemental strand, 544474 - 544393
Alignment:
Q  457 gtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||| ||||| || ||||||||| || |||| |||||| ||||||||||||||| ||||| | ||| |||| |||||    
T  544474 gtgtctgctctggtggatt-gtgagttgacggatgccgttttgatttgtgtcgggagtctggtgggtcgatcactttagattc 544393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 41277000 - 41276954
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||| |||  ||||| |||||    
T  41277000 tgagaattgttgttcccacatttgataaggatgttgcacacgagtaa 41276954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 4489828 - 4489767
Alignment:
Q  478 tgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||| ||| |||  ||||||||||||||||||| ||||| |||||| |||| ||||    
T  4489828 tgagttgaggagtgtcttaatgacttgtgtcgggagtctagtggggcaatcgttttttattc 4489767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 41250210 - 41250165
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||  ||||||||||| ||||| |||||    
T  41250210 gagaattgttgttcccacattgcataaggttgtggcacacgagtaa 41250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 3e-90; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 296 - 539
Target Start/End: Complemental strand, 17324443 - 17324200
Alignment:
Q  296 gcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgact 395  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  17324443 gcgcaggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagctggttcgctttgtgctactattccgcct 17324344  T
Q  396 attctctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcct 494  Q
     ||| | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||    
T  17324343 tttccccgtctttggattttgacatcgggttattggtgggtcgagtttttggataggtttaggtgtctactccggt-ggttcgtgagttgaggggtgcct 17324245  T
Q  495 ttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||| |||| ||||| |||||||||||||| ||| ||||||||||    
T  17324244 tttttacttatgtcgtgagtcttgtgggccgatctcttttgattc 17324200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 293 - 539
Target Start/End: Original strand, 16284860 - 16285104
Alignment:
Q  293 tgtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccg 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||    
T  16284860 tgtgcgccggtctattcatgtggtggtgatgcaggttgatttggt-ggcttgttttgatttgtttgtgttcgagctggttcactttgcactactgtttcg 16284958  T
Q  393 actattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtg 491  Q
     || ||| ||||||||| |||||| ||||| | ||||||||| ||||||||||||||||||| | ||||||||||  |||| ||||||||||||||||||    
T  16284959 tcttttcgctgtctttg-attttggcatcgagctattggtgggtcgagtttttggacaggttaaggtgtctgctcttgtgg-ttcgtgagttgaggggtg 16285056  T
Q  492 cctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  16285057 cctttttgactagtgtctggagtcttgtgggccgatcgcttttgattc 16285104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 14398611 - 14398776
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |    
T  14398611 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatcca--ttttt 14398708  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  14398709 tttaatcaattcttgatccaaaatcattcaagcatcaaacataggaggtatcaacacacttttgacgt 14398776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 36817518 - 36817352
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  36817518 aaatgtttcatcggatgaaacagccacctgctcccc-tacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatccaatttttt 36817420  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36817419 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 36817352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 48250866 - 48250698
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttc 699  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  48250866 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcatttacacctccattcaatcccaaaatccaatatttt 48250767  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  48250766 tttttatcaattcttgatcaaaaatcattcaagcatcaagcataggaggtatcaacatacttttgacgt 48250698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 307 - 539
Target Start/End: Original strand, 45181401 - 45181632
Alignment:
Q  307 ttcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtct 406  Q
    |||| ||||||||||||||  |||||||||| |||||| |||| ||||||||||||||||  |||||| |||| |||||| ||||  || || |||||||    
T  45181401 ttcaggtggtggtgatgcatattgatttggt-ggcttggtttgttttgtttgtgttcgagttggttcgttttgcgctactattccaccttttttctgtct 45181499  T
Q  407 ttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgt 505  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||||   |||||||||| ||||| |||||||||||||||||||||||||||||| |    
T  45181500 ttggattttggcattgggttattggtgggtcgagtttttggacaggttagggtgtctgctctggtgg-ttcgtgagttgaggggtgcctttttgactttt 45181598  T
Q  506 gtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||||||||||||||||||||||    
T  45181599 gtcgggagtcttgtgggccaatcgcttttgattc 45181632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 46993227 - 46993060
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| ||||||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |    
T  46993227 aaatgtttcatcagatgaaacagccacctgctccccttacatattattttcatcatcaacttcatttccacctccattcaatcccaaaatccaatatttt 46993128  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  46993127 tttcatcaattcttgatccaaaatcattcaattatcaagcataggaggtatcaacacacttttgacgt 46993060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 604 - 768
Target Start/End: Complemental strand, 2745225 - 2745059
Alignment:
Q  604 tgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaattttctt 701  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| || ||    
T  2745225 tgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatcccaaaatccaatattttt 2745126  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2745125 ttcatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 2745059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 7843013 - 7842843
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaa---ttt 697  Q
    |||||||||||| ||| ||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||   |||    
T  7843013 aaatgtttcatcggatgaaacagccacctgctcctcctacacattattttcatcatcaacttcatttccacctccattcaatcccaaaatccaatatttt 7842914  T
Q  698 tcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7842913 tttttttatcaattcttgattcaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 7842843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 13747715 - 13747550
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |    
T  13747715 aaatgtttcatccgatgaaacagccacctgctccccctacactctattttcttcatcaccttcatttccacctccattcaatcccaaaatcca--ttttt 13747618  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  13747617 tttaatcaatttttgatccaaaatcattcaagcatcaagtataggaggtatcaacacactattgacgt 13747550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 602 - 768
Target Start/End: Complemental strand, 23443128 - 23442961
Alignment:
Q  602 aatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctcc---attcaatcccaaaatccaatttt 698  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||  |||    
T  23443128 aatgtttcatcagatgaaacaaccacctgctccccctacacactattttcttcatcaacttcatttccacctccattattcaatcccaaaatcca--ttt 23443031  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  23443030 tttttaatcaattattgatccaaaatcattcaagcatcaagcataggaggtatcaacacagttttgacgt 23442961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 9429845 - 9429677
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||| |    
T  9429845 aaatgtttcatccgatgaaacaactacctgctccccctacacactgttttcttcatcaccttcatttccacctccattcaatcccaaaatcctttttttt 9429746  T
Q  701 ttt-aatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  9429745 tttaaatcaatttttgatccaaaatcattcaagcatcaagtataggaggtatcaacacactattgacgt 9429677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 601 - 765
Target Start/End: Original strand, 50953352 - 50953519
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaat-tt 697  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||    
T  50953352 aaatatttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatcccaaaatccaatatt 50953451  T
Q  698 tcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttga 765  Q
    | |||  | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50953452 tttttccaacaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttga 50953519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 603 - 765
Target Start/End: Original strand, 7837674 - 7837836
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||| | |||| |||| || |||    
T  7837674 atgtttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatctccaaattcaatatttttt 7837773  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttga 765  Q
    | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7837774 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttga 7837836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 29929505 - 29929670
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||||| || |||||| || |||||||||||||||||||||||| |||||||||||  | |||| || || ||||||| ||||||||| || |||    
T  29929505 atgtttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaacttccataccacttctatccaatccccaaatccaatatttttt 29929604  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29929605 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 29929670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 29978659 - 29978824
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||||| || |||||| || |||||||||||||||||||||||| |||||||||||  | |||| || || ||||||| ||||||||| || |||    
T  29978659 atgtttcatcatatgaaacagtcacctgctccccctacacactattttcatcatcaacttccataccacttctatccaatccccaaatccaatatttttt 29978758  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29978759 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 29978824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 30947649 - 30947483
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  30947649 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 30947552  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30947551 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 30947483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 618 - 768
Target Start/End: Original strand, 6740955 - 6741106
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttcttttaatcaattcttga 716  Q
    ||||||| | ||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||||||||||| ||||  | ||||||||| ||||    
T  6740955 aaacagctacctgctccccctacacactactttcttcatcaccttcatttccaacctcatttcaatcccaaaatccattttttctataatcaatttttga 6741054  T
Q  717 tccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  6741055 tccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 6741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 8160991 - 8160825
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  8160991 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 8160894  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8160893 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 8160825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 606 - 768
Target Start/End: Original strand, 16444677 - 16444841
Alignment:
Q  606 tttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttctttt 703  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||| |||||||  | || |||     
T  16444677 tttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatcctttattttttc 16444776  T
Q  704 aatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16444777 catcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 16444841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 601 - 759
Target Start/End: Original strand, 3948806 - 3948963
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| |||| || | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  3948806 aaatgtttcatccgatgaaactgctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 3948903  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacac 759  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3948904 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacac 3948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 6505971 - 6505805
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccc-tacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctt 701  Q
    |||||||||||||| |||||||||  ||||||||| |||| ||||||||| |||||||||||| | |||||| || |||||||| |||| |||| || ||    
T  6505971 atgtttcatcagatgaaacagccacatgctcccccctacatactattttcatcatcaacttcaataccaccttcagtcaatccccaaattcaatattttt 6505872  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  6505871 ttcatcaaatctagatccaaaatcattcaagcgtcaagcataggaggtatcaacacacatttgacgt 6505805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 21956201 - 21956033
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaa-tcccaaaatccaattttc 699  Q
    |||||||||||||||| |||||| || |||| ||||||||| ||||||||||  ||||||||||||||| || || ||||| |||| |||||||||        
T  21956201 aaatgtttcatcagatgaaacagtcacctgcaccccctacatactattttctctatcaacttcatttcctcc-cctttcaaatccccaaatccaataaaa 21956103  T
Q  700 t-tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
      ||| || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21956102 aatttcattaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 21956033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 538
Target Start/End: Complemental strand, 2782343 - 2782113
Alignment:
Q  307 ttcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtct 406  Q
    |||||||||||||||||||| ||||||| || | |||| |||| ||||||| || |||||| |||||| |||| |||  ||||||  || |||| || ||    
T  2782343 ttcaagtggtggtgatgcagtttgattttgtag-cttgatttggtttgtttatgctcgagctggttcgatttgcgctgttgttccaccttttctttggct 2782245  T
Q  407 ttggattttgacatcgggttattggtggtc-gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgt 505  Q
    |  || |||| ||||  | || |||||| | ||||||||||||||||| | |||||||||| ||||| || |||||||||||||||||||  ||| ||||    
T  2782244 tacgaatttggcatctagataatggtgggccgagtttttggacaggttaaggtgtctgctctggtggttt-gtgagttgaggggtgccttaatgatttgt 2782146  T
Q  506 gtcgggagtcttgtgggccaatcgcttttgatt 538  Q
    |||| |||||| ||||| | ||| |||||||||    
T  2782145 gtcgagagtctggtgggacgatcacttttgatt 2782113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 682 - 768
Target Start/End: Original strand, 9582655 - 9582741
Alignment:
Q  682 tcccaaaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| |||||||||  | |||| ||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  9582655 tccccaaatccaatagttttttcatcaaatcttgctccaaaatcattgaagcatcaagcataggaggtatcaacacacttttgacgt 9582741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 695
Target Start/End: Complemental strand, 11389634 - 11389568
Alignment:
Q  629 tgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat 695  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  11389634 tgctccctctacatactattttcttcatcaacttcatttccacctccattcaatctcaaaattcaat 11389568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 535
Target Start/End: Complemental strand, 3968695 - 3968597
Alignment:
Q  436 cgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttg 535  Q
    ||||||||| || || |||  |||||||||| ||||| ||||||||||||||||||||||  ||| ||||||||||||||| |||| |||||||||||||    
T  3968695 cgagtttttagatagattttggtgtctgctctggtgg-ttcgtgagttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttg 3968597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 535
Target Start/End: Original strand, 4000110 - 4000208
Alignment:
Q  436 cgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttg 535  Q
    ||||||||| || || |||  |||||||||| ||||| ||||||||||||||||||||||  ||| ||||||||||||||| |||| |||||||||||||    
T  4000110 cgagtttttagatagattttggtgtctgctctggtgg-ttcgtgagttgaggggtgccttgatgatttgtgtcgggagtctggtggaccaatcgcttttg 4000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 41137652 - 41137698
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41137652 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 41137698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 49217043 - 49217091
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49217043 ttgagaattgttgttcccacatttgataagattgtgccacactagtaaa 49217091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 36817661 - 36817614
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36817661 tgagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 36817614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 23443246 - 23443199
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23443246 tgagaattgttgttcccacatttgataaggctgtgacacactagtaaa 23443199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 690
Target Start/End: Complemental strand, 28611094 - 28611008
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaat 690  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| |||| |||||||||||  | |||| ||||| ||| ||||||||    
T  28611094 atgtttcatcaaataaaacagccagatgctccccctacacacta-tttcatcatcaacttccataccacttccatccaaacccaaaat 28611008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Complemental strand, 29918320 - 29918229
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaa 709  Q
    |||||| || |||||||||||||||||||||||| |||| ||||||  | |||| ||||| ||||||| ||||||||| || |||| |||||    
T  29918320 aaacagtcacctgctccccctacacactattttcatcattaacttccataccacttccatccaatccccaaatccaatatttttttcatcaa 29918229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Complemental strand, 29967473 - 29967382
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaa 709  Q
    |||||| || |||||||||||||||||||||||| |||| ||||||  | |||| ||||| ||||||| ||||||||| || |||| |||||    
T  29967473 aaacagtcacctgctccccctacacactattttcatcattaacttccataccacttccatccaatccccaaatccaatatttttttcatcaa 29967382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 602
Target Start/End: Complemental strand, 50216995 - 50216948
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  50216995 ttgagaattgttgttcccacatttgataaggttgtggcacacgagtaa 50216948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 7841053 - 7841101
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  7841053 ttgagaattattgttcccacatttgataaggctgtgtcacactagtaaa 7841101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 43478969 - 43478921
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  43478969 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatg 43478921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 7843156 - 7843110
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||    
T  7843156 gagaattgttgttccctcatttgataaggctgtgccacattagtaaa 7843110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 1388243 - 1388195
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  1388243 gagaattgttgttcccacattacataaggctgtgccacacaagtaaatg 1388195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Original strand, 26245269 - 26245317
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||| ||||||| || |||||||||| |||||||    
T  26245269 tgagaattgttgttcccacttttgatatggctgtgccacacgagtaaat 26245317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 43476125 - 43476173
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  43476125 gagaattgttgttctcacattacataaggttgtgccacacgagtaaatg 43476173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 595
Target Start/End: Complemental strand, 48251009 - 48250970
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccaca 595  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  48251009 tgagaattgttgttcccacattacataaggttgtgccaca 48250970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 588
Target Start/End: Complemental strand, 54965002 - 54964971
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttg 588  Q
    ||||||||||||||||||||||||||||||||    
T  54965002 gagaattgttgttcccacatttgataaggttg 54964971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 587
Target Start/End: Complemental strand, 34694573 - 34694543
Alignment:
Q  557 gagaattgttgttcccacatttgataaggtt 587  Q
    |||||||||||||||||||||||||||||||    
T  34694573 gagaattgttgttcccacatttgataaggtt 34694543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 49219930 - 49219884
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| || ||| ||||||||||||| |||||||||||||||||    
T  49219930 gagaattgctgctcctacatttgataaggctgtgccacactagtaaa 49219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 5136519 - 5136568
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||||||  |||||  |||||||||| ||||||||    
T  5136519 tgagaattgttgttcccacattacataagactgtgccacacaagtaaatg 5136568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 46993311 - 46993262
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||| ||||| |||||||||||||| ||||||| || ||||||||    
T  46993311 tgagaattgctgttcacacatttgataaggctgtgccatacgagtaaatg 46993262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 588
Target Start/End: Original strand, 51693821 - 51693854
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttg 588  Q
    ||||||||||||||||||| ||||||||||||||    
T  51693821 ttgagaattgttgttcccatatttgataaggttg 51693854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 51696654 - 51696609
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||||||||||| ||||||||||||||| |||| ||||| |||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaa 51696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 1e-77; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 1035260 - 1035427
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  1035260 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaatttttc 1035359  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1035360 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 1035427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 25897076 - 25896910
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  25897076 aaatgtttcatccgatgaaacagccacctgctccccctacacgctattttcttcatcaccttcatttccacctccattcaatcccaaaatccaatttt-t 25896978  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25896977 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 25896910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 27867842 - 27867676
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |    
T  27867842 aaatgtttcatccgatgaaacaaccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcc-atttttt 27867744  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  27867743 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 27867676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 601 - 766
Target Start/End: Original strand, 28387345 - 28387510
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| || |    
T  28387345 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaatccaatatttt 28387444  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    ||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28387445 tttcatcaattcttaatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgac 28387510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 602 - 768
Target Start/End: Complemental strand, 34123918 - 34123750
Alignment:
Q  602 aatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat--tttc 699  Q
    ||||||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||     
T  34123918 aatgtttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcatttccacctccattcaatcccaaaatccaataatttt 34123819  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34123818 tttttatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 34123750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 34077844 - 34078010
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| |||||| || ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||| |    
T  34077844 aaatgtttcatccgatgaaacagtcacctgctccccctacacactattttcttcatcaccttcatttccatctccattcaatcccaaaattc-atttttt 34077942  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  34077943 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 34078010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 7021880 - 7021714
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |    
T  7021880 aaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcattttcacctccattcaatcccaaaatcc-atttttt 7021782  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||    
T  7021781 tttaatcaatttttgatccaaaataattcaagcatcaaacataggaggtatcaacacactattgacgt 7021714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 37820876 - 37820711
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||  ||| |    
T  37820876 aaatgtttcatccgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccatttccattcaatcccaaaatcca--ttttt 37820779  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  37820778 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 37820711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 28886415 - 28886249
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||| | |||||||||  ||||||||||||||| |    
T  28886415 aaatgtttcatctgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttcctcttccattcaaatccaaaatccaatttt-t 28886317  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  28886316 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 28886249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 31098929 - 31098763
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||  ||| |||| ||| ||    
T  31098929 atgtttcatcagatgaaacagccatctgctccccctacatactattttcatcatcaacttcatttccacctctattcaatcccccaattcaatatttttt 31098830  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  31098829 ttcatcaaatcttgatccaaaatcattcaagcatcatgcatagaaggtatcaacacacttttgacgt 31098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 13568097 - 13567931
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |    
T  13568097 aaatgtttcatctgatgaaacagctacctgctccacctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcc-ttttttt 13567999  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  13567998 tttaatcaattttttatccaaaatcattcaagcatcaagcatagaaggtatcaacacactattgacgt 13567931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 342 - 539
Target Start/End: Original strand, 35846938 - 35847136
Alignment:
Q  342 ttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggt-ggtcgagt 440  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||  || |||| ||||||||||||||| ||||||||||||||| |||| |||    
T  35846938 ttgttttgatttgtttgtgttcgagctggttcgctttatgctattgttccaccttttctttgtctttggattttggcatcgggttattggtgggtcaagt 35847037  T
Q  441 ttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcc-tttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||| ||| | |||||||||| ||| |||| ||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||    
T  35847038 ttttggacatgttaaggtgtctgctctggt-ggtttgtgagttgatgggtgccttttttgacttgtgtcgggagttttgtgggccgatcgattttgattc 35847136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 7800981 - 7800816
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || ||||||| |||||  ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| || |||    
T  7800981 atgtttcatcagatgaaacagtcacctgctcctcctacgtactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttttt 7800882  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7800881 tcatcaaatcttgatccaaaatcattcaagcatcaaacataggaggtatcaacacacttttgacgt 7800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 38860197 - 38860031
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||| || |||||||| ||||| ||||| | ||||| |    
T  38860197 atgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattctaatccaaaaattc-atttttt 38860099  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38860098 ttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 38860031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 374 - 539
Target Start/End: Complemental strand, 42742543 - 42742379
Alignment:
Q  374 gctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgg 472  Q
    |||||| ||||||||| | ||| |||||||| ||||||||||| ||||||||||||||||| || |||||||| ||||||||| |||||||||| |||||    
T  42742543 gctttgcgctactgtttcaacttttctctgtttttggattttggcatcgggttattggtgggtcaagtttttgaacaggtttaggtgtctgctctggtgg 42742444  T
Q  473 gttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
     |||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  42742443 -ttcgtgggttgtggggtgcctttttgacttgtgtcgggagtcttgtggg-cgatcgcttttgattc 42742379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 760
Target Start/End: Original strand, 14279901 - 14280059
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  14279901 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 14279998  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacact 760  Q
     | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14279999 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacact 14280059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 11033457 - 11033292
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||| |||||||| ||||      
T  11033457 atgtttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatccattttt-- 11033360  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| |||||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  11033359 tttcatcaatccttgatccaaaatcattcaagcatcaaacataggaggtatcaacacacatttgacgt 11033292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 4204205 - 4204039
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaatt-ttctt 701  Q
    |||||||||||||| ||||| | | |||||||| ||||||||||||||| |||||||||||| | | || ||||| || |||| |||||||||  || ||    
T  4204205 atgtttcatcagatgaaacaactacctgctccctctacacactattttcatcatcaacttcaatactacttccatccagtccccaaatccaataattttt 4204106  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4204105 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 4204039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 33993359 - 33993523
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||| | |||||||||||  | |||| || || ||| ||| ||||||||  |  |||    
T  33993359 atgtttcatcagttgaaacagccacctgctccccctacacactattt-catcatcaacttccataccacttcaatccaaaccccaaatccaaaatatttt 33993457  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33993458 tcatcaattcttgctccaaaattattcaagcatcaagcataggaggtatcaacacacttttgacgt 33993523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 338 - 539
Target Start/End: Original strand, 29685664 - 29685864
Alignment:
Q  338 tggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggt-ggtc 436  Q
    ||||||||||||||| |||||||||||||| ||||| ||||| | |||||||||  || ||||||||||||||| |||| |||  |||||||||| |||     
T  29685664 tggcttgttttgatt-gtttgtgttcgagctggttcactttgcgttactgttccaccttttctctgtctttggaatttggcatatggttattggtgggtt 29685762  T
Q  437 gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttga 536  Q
    ||||||||| ||||||| | | |||||||| ||| |||||||||||||||| || ||||  |||| ||||||||||||||  |||| | ||| |||||||    
T  29685763 gagtttttgaacaggttaaggggtctgctctggt-ggttcgtgagttgaggagtaccttaatgacctgtgtcgggagtctaatgggtcgatcacttttga 29685861  T
Q  537 ttc 539  Q
    |||    
T  29685862 ttc 29685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 392 - 539
Target Start/End: Original strand, 3204171 - 3204321
Alignment:
Q  392 gactattctctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttat----gtgtctgctccggtgggttcgtgagttgag 486  Q
    |||| ||||||||||||| |||||| ||||||||||||||| ||||||| |||||| |||||| ||    |||| ||||| ||| || ||||||||||||    
T  3204171 gacttttctctgtctttgaattttggcatcgggttattggtgggtcgaggttttggtcaggttaattaaggtgtatgctctggt-ggctcgtgagttgag 3204269  T
Q  487 gggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||||| |||||||||  ||||||||||| ||||||| |||||||||    
T  3204270 gggtgcctttttaacttgtgtc-agagtcttgtggaccaatcgtttttgattc 3204321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 403 - 539
Target Start/End: Original strand, 2706963 - 2707099
Alignment:
Q  403 gtctttggattttgacatcgggttattggtg-gtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgac 501  Q
    ||||||||| |||| |||| ||||||||||| | |||||| ||||||||||| | ||| |||||||||||| ||||||||||||||||||| ||  ||||    
T  2706963 gtctttggaatttggcatctggttattggtgtgccgagttcttggacaggttaaggtgcctgctccggtgg-ttcgtgagttgaggggtgctttaatgac 2707061  T
Q  502 ttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||| |||  || ||| ||||||||||    
T  2707062 ttgtgtcgggagtctagtgaaccgatcacttttgattc 2707099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 307 - 538
Target Start/End: Original strand, 25341507 - 25341735
Alignment:
Q  307 ttcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtct 406  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||||||| |||||| |||||| |||| |||| |||| | ||| || | |||||    
T  25341507 ttcaagtggtggtgatgcaggttaattttgt-ggcttgttttgatttgtttgtgctcgagctggttcg-tttgcgctattgtt-caacttttatatgtct 25341603  T
Q  407 ttggattttgacatcgggttattggtg-gtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgt 505  Q
    | ||| |||| |||| || ||  || | | ||| ||||| |||| ||| | || ||||||| ||| | |||||||||| |||||||||||  |||  |||    
T  25341604 taggaatttggcatctggataaaggcgcgccgaatttttcgacatgttaaggtttctgctctggt-gcttcgtgagttcaggggtgccttgatgatgtgt 25341702  T
Q  506 gtcgggagtcttgtgggccaatcgcttttgatt 538  Q
    ||||||||||| ||||||| ||| |||||||||    
T  25341703 gtcgggagtctggtgggccgatcacttttgatt 25341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 539
Target Start/End: Original strand, 39368833 - 39368900
Alignment:
Q  472 ggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||    
T  39368833 ggttcgtgagttgagaggtgtctttttgacttgtgtcgggagtcttgtgggccgaccgcttttgattc 39368900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 18538329 - 18538163
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctt- 701  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| | |||||||||||  | |||| | | | ||| ||| ||||||||            
T  18538329 atgtttcattagatgaaacagccacctgctccccctacacactattt-catcatcaacttccataccactttcgtccaaaccccaaatccaaaaaaaaaa 18538231  T
Q  702 -ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     || ||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  18538230 attcatcaaatcttgctccaaaatcattcaagcataaagcataggaggtatcaacacacttttgacgt 18538163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 293 - 404
Target Start/End: Original strand, 39368707 - 39368815
Alignment:
Q  293 tgtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccg 392  Q
    |||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||  ||||||||||||||| |||| ||| || |||  |||||||    
T  39368707 tgtgcgccggtctattcaggtggtggtgatgcaagttgttttgg-tggcttgttttga--tgtttgtgttcgagctggtttgctgtgcgcttttgttccg 39368803  T
Q  393 actattctctgt 404  Q
     || ||||||||    
T  39368804 ccttttctctgt 39368815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 34944026 - 34944083
Alignment:
Q  711 tcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34944026 tcttgctccaaaatcattgaagcatcaagcataggaggtatcaacacacttttgacgt 34944083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 25897219 - 25897172
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25897219 tgagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 25897172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 687 - 768
Target Start/End: Original strand, 21999215 - 21999297
Alignment:
Q  687 aaatccaat-tttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||| ||| |||| ||||| ||||  |||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  21999215 aaatccaatatttttttttatcaaatcttactccaaaattattgaagcatcaagcataggaggtatcaacacacttttgacgt 21999297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 39743287 - 39743241
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  39743287 gagaattgttgttcccacatttgataaggctgtgccacactagtaaa 39743241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 539
Target Start/End: Original strand, 18557479 - 18557574
Alignment:
Q  442 tttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||| |||||| | |||||| ||| ||||||| |||||||||||||||||| |||||| |||||||||||||| | |||||| ||| ||||||||||    
T  18557479 tttgggcaggttaaggtgtctactctggtgggt-cgtgagttgaggggtgccgttttgatttgtgtcgggagtc-tatgggccgatcacttttgattc 18557574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 30354390 - 30354227
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||||| || |||||| || |||||| ||||||| ||||||| | |||||||||||  | |||| | ||| |||| |  |||| |||| || |||    
T  30354390 atgtttcatcaaatgaaacagtcacctgctcaccctacatactattt-catcatcaacttccataccactttcatccaattcttaaattcaatatt-ttt 30354293  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| | |||  ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||    
T  30354292 tcatcaaattttgcaccaaaatcattcaagtatcaagcataggagatatcaacacacttttcacgt 30354227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 27867960 - 27867913
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27867960 tgagaattgttgttcccacatgtgataaggctgtgccacactagtaaa 27867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 34122444 - 34122504
Alignment:
Q  545 gatcaattgatt--gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||||    
T  34122444 gatcaattgattttgaaaattgttgttcccatatttgataaggttgtgccacattagtaaa 34122504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 34124073 - 34124028
Alignment:
Q  558 agaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaa 34124028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 38407133 - 38407178
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||    
T  38407133 gagaattgttgttcccacatttgataaggttgtggcacacgagtaa 38407178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 604 - 663
Target Start/End: Original strand, 21979646 - 21979704
Alignment:
Q  604 tgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttc 663  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||    
T  21979646 tgtttcatcagatgaaacagccacatgctccccctacacacta-tttcctcatcaacttc 21979704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 560 - 602
Target Start/End: Complemental strand, 1397486 - 1397444
Alignment:
Q  560 aattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  1397486 aattgttgttcccacatttgataaggttgtggcacacgagtaa 1397444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 609 - 768
Target Start/End: Original strand, 20285094 - 20285253
Alignment:
Q  609 catcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcc--caaaatccaattttcttttaat 706  Q
    |||||||| ||| |||||  |||||| ||||| |||||||| | |||||||||||  |||| | |||||  || ||  ||||||| ||| || |||| ||    
T  20285094 catcagatgaaatagccagttgctcctcctactcactattt-catcatcaacttcccttcctcttccatctaaacctccaaaatctaatatt-ttttcat 20285191  T
Q  707 caattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     || ||||| |||||||||||| ||||||||  | ||| |||||||||||||||||||||||    
T  20285192 gaaatcttgctccaaaatcatttaagcatcaatcctagaaggtatcaacacacttttgacgt 20285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 41798752 - 41798798
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  41798752 gagaattgttgttcccacaattgataaggccgtgccacactagtaaa 41798798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 30887507 - 30887454
Alignment:
Q  549 aattgattgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||| |||| |||||||||||||||||||||||| |||||| ||||| |||||    
T  30887507 aattggttgataattgttgttcccacatttgataacgttgtggcacacgagtaa 30887454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 14802 - 14754
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||| ||||  ||||||||||||||||||||||||| |||||||    
T  14802 tgagaattgctgtttacacatttgataaggttgtgccacacgagtaaat 14754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 2532020 - 2532068
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  2532020 gagaattgttgttcccacattacataaggctgtgccacacaagtaaatg 2532068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 585
Target Start/End: Complemental strand, 42942593 - 42942562
Alignment:
Q  554 attgagaattgttgttcccacatttgataagg 585  Q
    ||||||||||||||||||||||||||||||||    
T  42942593 attgagaattgttgttcccacatttgataagg 42942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 1035118 - 1035164
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||| | |||||||| |||||||||||| ||||    
T  1035118 gagaattgttgttcccacgtgtgataaggctgtgccacactaataaa 1035164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 13568216 - 13568166
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||||  |||||| ||||||| || ||||||||    
T  13568216 ttgagaattgttgttcccacattacataaggctgtgccatacgagtaaatg 13568166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 17967025 - 17966979
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||||| || |  |||||||||||    
T  17967025 gagaattgttgttcccacatttgataaggctgagaaacactagtaaa 17966979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 35777156 - 35777106
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||| ||||||||| ||  ||||||||||||||||| ||||||||    
T  35777156 ttgagaattgatgttcccacgttacataaggttgtgccacacgagtaaatg 35777106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 37820989 - 37820939
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||||||| |  || ||||||||||||| |||||||    
T  37820989 attgagaattgttgttcccacatatagtatggttgtgccacacgagtaaat 37820939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 41799907 - 41799861
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||  |||| ||||| |||||    
T  41799907 tgagaattgttgttcccacatttgataagactgtgacacacgagtaa 41799861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 144; Significance: 3e-75; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 11351 - 11517
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11351 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaatttt-t 11449  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11450 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 11517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 11235 - 11281
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaa 11281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 7e-73; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 293 - 539
Target Start/End: Complemental strand, 4397716 - 4397473
Alignment:
Q  293 tgtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccg 392  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  4397716 tgtgcgccggtcttttctggtggtggtgatgcaggttgatttggt-ggcttgttttgatttgtttgtgttcgagctg-ttcgctttgcgctactgttccg 4397619  T
Q  393 actattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtg 491  Q
     || |||||||||||||||||||| ||| | ||||||||||| ||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||    
T  4397618 cct-ttctctgtctttggattttggcatagagttattggtgggtcgagtttttggacaagtttatgtgtctgctatggtgg-ttcgtgagttgaggggtg 4397521  T
Q  492 cctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    || ||||||||| | |||||||||||||||||  ||||||||||||||    
T  4397520 ccattttgacttctctcgggagtcttgtgggctgatcgcttttgattc 4397473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 618 - 768
Target Start/End: Complemental strand, 27276357 - 27276205
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaa--ttttcttttaatcaattcttg 715  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  27276357 aaacagccacctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatctaaattttttttttaatcaattcttg 27276258  T
Q  716 atccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27276257 atccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 27276205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 628 - 768
Target Start/End: Original strand, 24749752 - 24749894
Alignment:
Q  628 ctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaa--ttttcttttaatcaattcttgatccaaaatc 725  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  24749752 ctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaatttttttttttaatcaattcttgatccaaaatc 24749851  T
Q  726 attcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  24749852 attcaagcatcaagcataagaggtatcaacacacttttgacgt 24749894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 312 - 539
Target Start/End: Complemental strand, 37129192 - 37128966
Alignment:
Q  312 gtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttgga 411  Q
    |||||||||||||||   | |||||| || || ||||||||||||||||||||||| |||||| || | |||||||||||| || || ||||||||||||    
T  37129192 gtggtggtgatgcagacggttttggt-ggattattttgatttgtttgtgttcgagctggttcgtttggcgctactgttccgccttttttctgtctttgga 37129094  T
Q  412 ttttgacatcgggttattgg-tggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgg 510  Q
    |||||||||||| || |||| |||| ||||||||||||||||| | |||||||||| ||| ||||||||||||||  ||||||||||||||||||||  |    
T  37129093 ttttgacatcggatttttggttggttgagtttttggacaggttcaggtgtctgctctggt-ggttcgtgagttgataggtgcctttttgacttgtgttag 37128995  T
Q  511 gagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||||||| ||||||||||||||    
T  37128994 gagtcttgtgggccgatcgcttttgattc 37128966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 1101074 - 1100908
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||| || || ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || |    
T  1101074 aaatgtttcatcagatgaaaaagtcacctgctcccc-tacatactattttcatcatcaacttcatttccacctccattcaatccccaaatccaatatttt 1100976  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| || |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1100975 ttttattaattcttgatccaaaatcattcaagcatcaagtataggaggtatcaacacacttttgacgt 1100908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 24607573 - 24607407
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    ||||||||||| || |||||| || |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| ||| ||    
T  24607573 atgtttcatcaaatgaaacagtcacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttttt 24607474  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24607473 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 24607407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 3803566 - 3803397
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaatttt 698  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||||||| ||    
T  3803566 aaatgtttcattagatgaaacagccacctgctccccctacacactattttcttcatcaacttcatttttcatctccattccaatcccaaaatccaatatt 3803467  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3803466 ttttccaacaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 3803397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 7263093 - 7263262
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||| ||    
T  7263093 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatatt 7263192  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  7263193 ttttccatcaatccttgatccaaaatcattcaatcatcaagcataggaggtatcaacacacatttgacgt 7263262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 38945813 - 38945980
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccatt-caatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| ||||     
T  38945813 aaatgtttcatctgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccaaccccatttcaatcccaaaatccattttt- 38945911  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  38945912 ttttaagcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 38945980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 39794041 - 39794207
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||| |||||||| |||| |    
T  39794041 atgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatccattttt-t 39794139  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  39794140 tttcatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 39794207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 435421 - 435587
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| | | || ||||| ||||||| |||||||||  || ||    
T  435421 atgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcaatactacttccatccaatccccaaatccaataattttt 435520  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  435521 ttcatcaaatcttgatctaaaatcattcaagcatcaaacataggaggtatcaacacacttttgacgt 435587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 41008922 - 41008756
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaatt-ttctt 701  Q
    ||||||||| |||| |||||||||  ||||||||||||||||||||||| |||||||||||| | | || ||||| ||||||| |||||||||  || ||    
T  41008922 atgtttcattagatgaaacagccacatgctccccctacacactattttcatcatcaacttcaatactacttccatccaatccccaaatccaataattttt 41008823  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41008822 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 41008756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 606 - 768
Target Start/End: Complemental strand, 43950235 - 43950073
Alignment:
Q  606 tttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaa 705  Q
    ||||||||||| |||||| || || ||||||||||||||||||||| |||||||||||  | |||| ||||| ||||||| |||| |||| || |||| |    
T  43950235 tttcatcagatgaaacagacacctactccccctacacactattttcatcatcaacttccataccacttccatccaatccccaaattcaatatttttttca 43950136  T
Q  706 tcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43950135 tcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 43950073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 18003268 - 18003102
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | ||||||||||| |||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  18003268 aaatgtttcatccgatgaaacagctacctgctccccctgcacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 18003171  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18003170 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 18003102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 737
Target Start/End: Complemental strand, 41183220 - 41183083
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttc 699  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| |||     
T  41183220 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttt 41183121  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatca 737  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  41183120 ttttcatcaaatcttgatccaaaatcattcaagcatca 41183083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 621 - 768
Target Start/End: Original strand, 1149552 - 1149705
Alignment:
Q  621 cagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctttta-------atcaattct 713  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||  ||||       |||||||||    
T  1149552 cagccacctgctccccctacatactattttcatcatcaacttcatttccacctc-attcaatcccaaaattcaatatttatttatttttttatcaattct 1149650  T
Q  714 tgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1149651 tgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 1149705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 41560081 - 41560248
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccc-tacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaatttt 698  Q
    |||||||||||| ||| ||||||| | |||||||||| |||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||    
T  41560081 aaatgtttcatccgatgaaacagctacctgctcccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccattttt 41560178  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
      | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  41560179 tctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 41560248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 10624461 - 10624295
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| | ||     
T  10624461 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccattattt 10624364  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  10624363 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 10624295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 41053562 - 41053397
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||| |||| ||||| |||  || |||||||| | ||||||||| |||||||||||| | |||||| ||||||||||| |||| |||| || |||    
T  41053562 atgtttcatgagatgaaacaaccacatgttccccctatatactattttcatcatcaacttcaataccaccttcattcaatccccaaattcaatatttttt 41053463  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  41053462 tcatcaaatcttgatccaaattcattcaagcatcaagcataggaggtatcaacacacttttgacgt 41053397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 618 - 768
Target Start/End: Original strand, 9651259 - 9651410
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttcttttaatcaattcttga 716  Q
    ||||| ||| ||||||||  || | ||||||||| |||||||||||| | ||||||||| |||||||| ||||||||| ||| |||| ||||| ||||||    
T  9651259 aaacaaccacctgctccctatatatactattttcatcatcaacttcaataccacctccaatcaatccccaaatccaatattttttttcatcaaatcttga 9651358  T
Q  717 tccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9651359 tccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 9651410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 213448 - 213282
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||| ||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  213448 aaatgtttcatacgatgaaacagctacctgctccccctacacattatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 213351  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  213350 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaaaacactattgacgt 213282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 603 - 695
Target Start/End: Complemental strand, 20951067 - 20950973
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaat 695  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||    
T  20951067 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaat 20950973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 19187217 - 19187051
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat--tttct 700  Q
    |||||||||| ||| |||||| ||  || |||| ||||||||||||| | |||||||||||  | |||| ||||| |||  || |||||||||  ||| |    
T  19187217 atgtttcatcggatgaaacagtcacttgttcccactacacactattt-catcatcaacttccataccacttccatccaaatcctaaatccaataattttt 19187119  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| ||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  19187118 tttcatcaaatcttgctccaaaatcattcaagtatcaagcataggaggtatcaacacacatttgacgt 19187051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 521
Target Start/End: Original strand, 41958099 - 41958253
Alignment:
Q  368 cggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttat--tggtgg-tcgagtttttggacaggtttatgtgtctgc 464  Q
    |||||||||||| |||| |||||   || ||||||||||| |||||||| |||||||||||  || ||| | |  |||||||||||||| | ||||||||    
T  41958099 cggttcgctttgcgctaatgttctacct-ttctctgtcttcggattttggcatcgggttatattgatgggttggatttttggacaggttaaggtgtctgc 41958197  T
Q  465 tccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgg 521  Q
    || ||||| || ||||||||| |||||||||||||||||||||| ||||||||||||    
T  41958198 tctggtggttt-gtgagttgaagggtgcctttttgacttgtgtcaggagtcttgtgg 41958253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 705 - 768
Target Start/End: Original strand, 5335041 - 5335104
Alignment:
Q  705 atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  5335041 atcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 5335104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 687 - 768
Target Start/End: Complemental strand, 34921681 - 34921599
Alignment:
Q  687 aaatccaattttctttta-atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||| |||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  34921681 aaatccaatattctttttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacaaactttcgacgt 34921599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 311 - 515
Target Start/End: Complemental strand, 42048486 - 42048283
Alignment:
Q  311 agtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttgg 410  Q
    |||||||| |||||| |||||||| || ||||||||||| ||||||| ||||||||| |||||| ||||   |  ||||||  ||   ||||||||| ||    
T  42048486 agtggtggcgatgcatgttgattttgt-ggcttgttttggtttgtttatgttcgagctggttcgatttgcattgttgttccaccttccctctgtcttagg 42048388  T
Q  411 attttgacatcgggttattggtggtc-gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcg 509  Q
    | |||| | || || || |||||| | ||||||||||||| ||| | |||||||||| ||||| ||||||||||||| |||||||| |||| || |||||    
T  42048387 aatttggcctctggataatggtgggccgagtttttggacatgttaaggtgtctgctctggtgg-ttcgtgagttgagaggtgccttgttgatttctgtcg 42048289  T
Q  510 ggagtc 515  Q
    ||||||    
T  42048288 ggagtc 42048283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 1149406 - 1149452
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1149406 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 1149452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 44888458 - 44888377
Alignment:
Q  442 tttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggcc 524  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||| || |||||||||| | |||||||    
T  44888458 tttggacaggtttacgtgtctgctctggtgggt-cgtgagttgaggggtgccttattgatttatgtcgggagtttggtgggcc 44888377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 601 - 711
Target Start/End: Original strand, 5334639 - 5334748
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcc-acctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| | ||||| | ||||||||||||||||||||||  ||||||| |||||||||| |||||  ||||||||||||||||| ||||     
T  5334639 aaatgtttcatacgatgatacagctacctgctccccctacacactattt--ttcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 5334736  T
Q  700 ttttaatcaatt 711  Q
     | |||||||||    
T  5334737 ctataatcaatt 5334748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 29090544 - 29090588
Alignment:
Q  558 agaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  29090544 agaattgttgttcctacatttgataaggttgtgccacactagtaa 29090588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 704 - 768
Target Start/End: Complemental strand, 12908322 - 12908256
Alignment:
Q  704 aatcaattcttgatccaaaatcattcaagcatcaggcata--ggaggtatcaacacacttttgacgt 768  Q
    |||||| ||||| ||||||||||||||| ||||| |||||  |||||||||||||||||||||||||    
T  12908322 aatcaaatcttgctccaaaatcattcaaacatcaagcatataggaggtatcaacacacttttgacgt 12908256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 45475609 - 45475656
Alignment:
Q  720 aaaatcattcaagcatcaggcataggaggtatcaacacacttttgacg 767  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  45475609 aaaatcattcaagcatcaagcataggaggtaccaacacacttttgacg 45475656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 539
Target Start/End: Complemental strand, 23665513 - 23665447
Alignment:
Q  473 gttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||||||||| |||| | |||| |||||||||| ||||||| ||| ||||||||||    
T  23665513 gttcgtgagttgaggggtgccatttttatttgtatcgggagtctagtgggccgatcacttttgattc 23665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 27276513 - 27276467
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  27276513 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaa 27276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 34639454 - 34639408
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34639454 tgagaattgatgttcccacatttgataaggctgtgccacactagtaa 34639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 759
Target Start/End: Complemental strand, 23001080 - 23001032
Alignment:
Q  711 tcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacac 759  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  23001080 tcttgctccaaaatcattgaagcatcagtcataggaggtatcaacacac 23001032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 23346715 - 23346763
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  23346715 gagaattgttgtttacacatttgataaggttgtgccacacgagtaaatg 23346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 1096528 - 1096575
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  1096528 tgagtattgttgtttccacatttgataaggttgtggcacactagtaaa 1096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 662
Target Start/End: Original strand, 45475519 - 45475577
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaactt 662  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| |||| ||||||||||    
T  45475519 atgtttcatcagatgaaacagccacctgctccccctacatacta-tttcatcatcaactt 45475577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 1101191 - 1101145
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||    
T  1101191 gagaattgttgttcccatatttgataaggttgtgctatactagtaaa 1101145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 7262970 - 7263016
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  7262970 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaa 7263016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 20951187 - 20951137
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||| ||||||||||| |||||||| |||||||||| |||||||    
T  20951187 attgagaattgctgttcccacatgtgataaggctgtgccacaccagtaaat 20951137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 24749620 - 24749666
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  24749620 gagaattgctgttcccacatgtgataaggctgtgccacactagtaaa 24749666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 43870261 - 43870212
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||||||||    
T  43870261 tgagaattgatgttcccacattacataaggttgtgccacacgagtaaatg 43870212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 3943330 - 3943282
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||||| ||||||| | |||||||| ||||||||    
T  3943330 gagaattgttgttcccacattagataaggctatgccacacgagtaaatg 3943282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 28137791 - 28137839
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||| ||||||||||||  ||||||||||||||||| ||||||||    
T  28137791 gagaattgctgttcccacattatataaggttgtgccacacgagtaaatg 28137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Complemental strand, 7190089 - 7190042
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||||||    
T  7190089 gagaattgatgttcccacattacataaggttgtgccacacgagtaaat 7190042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Complemental strand, 29074141 - 29074094
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  29074141 gagaattgttgttcccacatttggtttggttgtgccacacgagtaaat 29074094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 34910121 - 34910179
Alignment:
Q  711 tcttgatccaaaatcattcaagcatcagg-cataggaggtatcaacacacttttgacgt 768  Q
    ||||| |||||||||||| ||||||||   | |||||||||||||||||||||||||||    
T  34910121 tcttgctccaaaatcattgaagcatcaaatcctaggaggtatcaacacacttttgacgt 34910179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 539
Target Start/End: Complemental strand, 4162162 - 4162063
Alignment:
Q  438 agtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgat 537  Q
    |||| ||||| ||||| | |||| ||||| ||||| |||| ||||||||||||||| |  ||| |||||| |||||||| ||||||| ||| ||||||||    
T  4162162 agttgttggataggttgaggtgtatgctctggtgg-ttcgagagttgaggggtgcc-tagtgatttgtgttgggagtctggtgggccgatcacttttgat 4162065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 601 - 766
Target Start/End: Original strand, 23913907 - 23914071
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |    
T  23913907 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatccaaaaatccaa-tttat 23914005  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23914006 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgac 23914071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 301 - 539
Target Start/End: Original strand, 38709754 - 38709990
Alignment:
Q  301 ggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattct 400  Q
    |||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||| |||| |||| |||||| |||||||||||| || ||||    
T  38709754 ggtctattcaggtggtggtgacgcaggttgatatggt-ggcttgttttgatttgtttgtgtttgagctggtttgctttgcgctactgttccgccttttct 38709852  T
Q  401 ctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttg 499  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| | |||| || || ||| ||||||||||||||||||||||||||||    
T  38709853 ctgtctttgaattttggcatcgggttattggtgggtcgagtttttggacaggttaaggtgtttgttctggt-ggttcgtgagttgaggggtgcctttttg 38709951  T
Q  500 acttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
     ||||| ||||||||||| |||||  ||||||||||||||    
T  38709952 ccttgtttcgggagtctt-tgggctgatcgcttttgattc 38709990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 601 - 798
Target Start/End: Original strand, 44465647 - 44465842
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |    
T  44465647 aaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcca--ttttt 44465744  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgtnnnnnnncaggtattgtacatattcttcga 798  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||       |||||||||||||| || |||||    
T  44465745 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacagactattgacgtaaaaaaacaggtattgtacattttattcga 44465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 294 - 539
Target Start/End: Original strand, 4391404 - 4391645
Alignment:
Q  294 gtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccga 393  Q
    ||||||||||||||||| |||||||||||| ||| |||||||| || ||||||||||   |||| ||||||||  |||| ||||||||||||| |||||     
T  4391404 gtgcgccggtctattcaggtggtggtgatgtaggatgatttgggtg-cttgttttga---gtttatgttcgagatggtttgctttgtgctactattccgc 4391499  T
Q  394 ctattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgc 492  Q
    || |||||||||||||||||||| ||||||||| ||||||| ||||| |||||| |||||| | ||||||| || ||||| |||||||||||||||||||    
T  4391500 cttttctctgtctttggattttggcatcgggttcttggtgggtcgaggttttggtcaggttaaggtgtctgttctggtgg-ttcgtgagttgaggggtgc 4391598  T
Q  493 ctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
     |||||| |||||||||||||||||||||||||||||||||||||||    
T  4391599 atttttgccttgtgtcgggagtcttgtgggccaatcgcttttgattc 4391645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 29356687 - 29356522
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |    
T  29356687 aaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcca--ttttt 29356590  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  29356589 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 29356522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 41453889 - 41454054
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |    
T  41453889 aaatgtttcatccgatgaaacagccacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcc--tttttt 41453986  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  41453987 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 41454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 50117774 - 50117604
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaa---ttt 697  Q
    |||||||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||    
T  50117774 aaatgttttatcagatgaaacagccacctgctccctctacacactattttcatcatcaacttcatttccacctccattcaatcccaaaatccaatatttt 50117675  T
Q  698 tcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50117674 tttttttatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 50117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 601 - 765
Target Start/End: Original strand, 15047359 - 15047522
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||| | |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |    
T  15047359 aaatgtttcatccgatgaaacagctacctgctccccctatacactattttcttcatcaccttcatttccacccccattcaatcccaaaatcc-atttttt 15047457  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttga 765  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  15047458 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattga 15047522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 37014970 - 37015136
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||| ||    
T  37014970 atgtttcatcagatgaaacagccacctgatccccctacatacttttttcatcatcaacttcatttccacctcctttcaatccccaaatccaatatttttt 37015069  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  37015070 tttatcaattcttgatccaaaatcatccaagcatcaagcataggaggtatcaacacacttttgacgt 37015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 5077991 - 5078160
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||| ||    
T  5077991 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatatt 5078090  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  5078091 ttttccatcaatccttgatccaaaatcattcaagcatcaagcataagaggtatcaacacacatttgacgt 5078160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 6562158 - 6561990
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||    
T  6562158 aaatgtttcatcagatgaaacagccacctgctccctcta-acactattttcttcatcaacttcattttccatctccattccaatcccaaaatccaatatt 6562060  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6562059 ttttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 6561990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 602 - 768
Target Start/End: Original strand, 30905822 - 30905989
Alignment:
Q  602 aatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaattttc 699  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||| ||     
T  30905822 aatgtttcatcagatgaaacagccacctgc-ccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatattt 30905920  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  30905921 tttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 30905989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 20349508 - 20349674
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  20349508 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 20349605  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  20349606 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 20349674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 31945857 - 31945691
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  31945857 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 31945760  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  31945759 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 31945691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 22397872 - 22398038
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||| |||||||| |||| |    
T  22397872 atgtttcatcagatgaaatagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatccattttt-t 22397970  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  22397971 tttcatcaatctttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 22398038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 44621112 - 44620945
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaattttct 700  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||| || ||||||| |||||| |||||||| | || |    
T  44621112 atgtttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatccattatttt 44621013  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||  |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  44621012 ttccatcaatccttgatccaaaatcattcaatcatcaagcataggaggtatcaacacacatttgacgt 44620945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 3948458 - 3948292
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  3948458 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 3948361  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  3948360 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 3948292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 38776122 - 38775956
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  38776122 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 38776025  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  38776024 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 38775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 606 - 768
Target Start/End: Original strand, 13629473 - 13629637
Alignment:
Q  606 tttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttctttt 703  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||| |||||||  | || |||     
T  13629473 tttcatcagatgaaacagccacctgctccccctacactctattttcttcatcaacttcatttttcatctccattccaatccaaaaatcctttattttttc 13629572  T
Q  704 aatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  13629573 catcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 13629637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 603 - 765
Target Start/End: Complemental strand, 8460091 - 8459931
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||| | | |||   || ||||||| ||||||||| ||| ||    
T  8460091 atgtttcatcagatgaaacagccacctgcttcccctacacactattttcatcatcaacttcaatactacc---atccaatccccaaatccaatatttttt 8459995  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttga 765  Q
    || ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  8459994 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataagaggtatcaacacacttttga 8459931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 397 - 521
Target Start/End: Complemental strand, 39909006 - 39908882
Alignment:
Q  397 ttctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctt 495  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||| ||    
T  39909006 ttctctgtctttggattttggcatcgggttattggtggatcgagtttttggacaggtttaggtgtatgctctggtgg-ttcgtgagttgaggggtgcttt 39908908  T
Q  496 tttgacttgtgtcgggagtcttgtgg 521  Q
    |||||||||||||| |||||||||||    
T  39908907 tttgacttgtgtcgtgagtcttgtgg 39908882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 603 - 766
Target Start/End: Original strand, 1654823 - 1654987
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    ||||||||||  || ||||||  | |||||||||||||||||||||||| |||||||||||  | |||| ||||| ||||||| |||| |||| ||| ||    
T  1654823 atgtttcatcgtatgaaacagttacctgctccccctacacactattttcatcatcaacttccataccacttccatccaatccccaaattcaatatttttt 1654922  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1654923 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgac 1654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 3983164 - 3983330
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  || ||| ||||||||||| ||||  ||||||||||||||||| | ||     
T  3983164 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcctcaccttcatttccaacctcatttcaatcccaaaatccattattt 3983261  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  3983262 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 3983330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 22345339 - 22345502
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattt-tctt 701  Q
    |||||||||| ||| ||||||||||||| || ||||||| |||||   | |||||||||||  | |||| ||||||||||||| ||||||||| | | ||    
T  22345339 atgtttcatcggatgaaacagccatctgttcaccctacatactat---catcatcaacttccataccacgtccattcaatccccaaatccaatatatttt 22345435  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  22345436 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactttttacgt 22345502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 19499106 - 19498940
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||| || || |||||||||||||||||||||| | |||||||||||  | |||| |||||  |||||| ||||||||| || |||    
T  19499106 atgtttcatcagatgaaagagtcacctgctccccctacacactattt-catcatcaacttccataccacttccatcaaatccccaaatccaatatttttt 19499008  T
Q  703 ta--atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |   ||||| ||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  19499007 tctcatcaaatcttgctccaaatacattcaagcatcaagcataggaggtatcaacacacttttgacgt 19498940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 46973282 - 46973446
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||  | |||| | ||| ||| ||| ||||||||       |    
T  46973282 atgtttcatcagatgaaacagccacctgctccccctacacactattt-catcatcaacttccataccactttcatacaaaccccaaatccaaaaaaaaat 46973380  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46973381 tcatcaaattttgctccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 46973446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 603 - 693
Target Start/End: Complemental strand, 9711645 - 9711555
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatcca 693  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||| |||||||    
T  9711645 atgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaatttcatttccacctccatttaatccccaaatcca 9711555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 603 - 747
Target Start/End: Complemental strand, 19054244 - 19054100
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    ||||||||||| ||||||||| ||  ||||||||||||||||||||||| |||||||||||  | |||| | ||| ||||||| ||||| ||| ||| ||    
T  19054244 atgtttcatcaaataaaacagtcacgtgctccccctacacactattttcatcatcaacttccataccactttcatccaatccc-aaatctaatatttttt 19054146  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggag 747  Q
    || ||||| ||||||||||||||||||||| ||||| | |||||||    
T  19054145 ttcatcaaatcttgatccaaaatcattcaaacatcaagtataggag 19054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 539
Target Start/End: Original strand, 38564743 - 38564939
Alignment:
Q  338 tggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggtggtcg 437  Q
    ||||||||||| || |||||  |||||||| |||||| |||||||| || ||||  || ||||| ||||| | |||| | |||| || | ||||||| ||    
T  38564743 tggcttgttttcatatgtttaggttcgagctggttcgttttgtgctgctattccacctgttctccgtcttcgaatttgg-catcaggattttggtgggcg 38564841  T
Q  438 agtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgat 537  Q
    |||||  ||||||||||| |||| ||||| | ||||| |||||||||||||||||||||| || ||||||  ||||||| ||||||| ||||||||||||    
T  38564842 agttt--ggacaggtttaggtgtttgctcagatgggt-cgtgagttgaggggtgcctttt-gatttgtgttaggagtctcgtgggccgatcgcttttgat 38564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 4516084 - 4516248
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||| || |||| ||||||||| |||||||||||||||||||||| | |||||||||||  | |||| | ||| ||| ||| ||||| ||       |    
T  4516084 atgttttattagatgaaacagccacctgctccccctacacactattt-catcatcaacttcgataccactttcatccaaaccccaaatcaaaaaaaaaat 4516182  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  4516183 tcatcaaatcttgctccaaaatcattcaagcatcaaacataggaggtatcaacacacttttgacgt 4516248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 535
Target Start/End: Original strand, 13987557 - 13987655
Alignment:
Q  436 cgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttg 535  Q
    ||||||||| || ||||||  |||||||||| ||||| ||||||||||||||||||||||  ||| ||||||||||| ||| ||||||||||||||||||    
T  13987557 cgagtttttagataggttttggtgtctgctctggtgg-ttcgtgagttgaggggtgccttgatgatttgtgtcgggaatctggtgggccaatcgcttttg 13987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 705 - 768
Target Start/End: Original strand, 13174018 - 13174081
Alignment:
Q  705 atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13174018 atcaaatcttgctccaaaatcattcaagcatcaagcatatgaggtatcaacacacttttgacgt 13174081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 9711798 - 9711744
Alignment:
Q  549 aattgattgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9711798 aatttattgagaattgttgttcccacatttgataaggttgtggcacactagtaaa 9711744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 700 - 768
Target Start/End: Complemental strand, 36076458 - 36076390
Alignment:
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||| ||||||||||||| ||||||||||||| |||||| || ||||||||||||||||||||    
T  36076458 tttttatcaaatcttgatccaaaaacattcaagcatcaagcatagaagatatcaacacacttttgacgt 36076390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 21944269 - 21944206
Alignment:
Q  705 atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| ||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  21944269 atcaaatcttgctccaaaatcattcaagcatcaaacataggaggtatcaacacacttttaacgt 21944206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 23913790 - 23913837
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23913790 tgagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 23913837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 37014882 - 37014930
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  37014882 ttgagaattgttgttcccacatttgataatgttgtggcacactagtaaa 37014930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 44465528 - 44465576
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  44465528 ttgagaattgttgttcccacatgtgataaggttgtgccatactagtaaa 44465576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 6562301 - 6562254
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6562301 tgagaattgctgttcccacatgtgataaggttgtgccacactagtaaa 6562254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 596
Target Start/End: Complemental strand, 29438161 - 29438120
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacac 596  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  29438161 ttgagaattgttgttcccacatttgataaggttgtggcacac 29438120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 603 - 694
Target Start/End: Complemental strand, 7981133 - 7981043
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaa 694  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||| |||| |||||||||||  | |||| ||||| ||| ||| ||||||||    
T  7981133 atgtttcataagatgaaacaaccacctgctccccctacacacta-tttcatcatcaacttccataccacttccatccaaaccccaaatccaa 7981043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 26944410 - 26944461
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  26944410 attgagaattgttgttcccacattacataaggctgtgccacacgagtaaatg 26944461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 555 - 602
Target Start/End: Complemental strand, 52805674 - 52805627
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  52805674 ttgagaattgatgttcccacatttgataaggttgtggcacacaagtaa 52805627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 5077875 - 5077921
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  5077875 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaa 5077921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 46320594 - 46320544
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||| ||||||||||||  ||||||||||||||||| ||||||||    
T  46320594 ttgagaattgctgttcccacattacataaggttgtgccacacgagtaaatg 46320544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 50117954 - 50117904
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||| ||||||||||||  ||||||||||||||||| ||||||||    
T  50117954 ttgagaattgctgttcccacattacataaggttgtgccacacgagtaaatg 50117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 596
Target Start/End: Complemental strand, 21144745 - 21144704
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacac 596  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  21144745 ttgagaattgttgttcccacatttgataaggttctggcacac 21144704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 27487775 - 27487730
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||    
T  27487775 gagaattgatgttcccacatttgataaggttgtggcacacgagtaa 27487730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 46886527 - 46886478
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||  |||||||||||||||||||| |||| ||||||||    
T  46886527 tgagaattgttgtttacacatttgataaggttgtgctacacgagtaaatg 46886478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 768
Target Start/End: Complemental strand, 16247625 - 16247557
Alignment:
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| ||||| ||||| |||||||||||| ||||||||  | ||| || ||||||||||||||||||||    
T  16247625 ttttcatcaaatcttgctccaaaatcattgaagcatcactcctagtagatatcaacacacttttgacgt 16247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 20114539 - 20114587
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  20114539 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatg 20114587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 32161431 - 32161383
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||||||    
T  32161431 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatg 32161383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 601
Target Start/End: Original strand, 44336187 - 44336231
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagta 601  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||    
T  44336187 gagaattgttgttcccacatttgataaggttatgacacacgagta 44336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 30905704 - 30905751
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  30905704 tgagaattgctgttcccacatgtgataaggctgtgccacaccagtaaa 30905751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 253418 - 253368
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||||   ||||| |||||||||| ||||||||    
T  253418 ttgagaattgttgttcccacattacgtaaggctgtgccacacgagtaaatg 253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 594
Target Start/End: Complemental strand, 471203 - 471165
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccac 594  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  471203 tgagaattgttgttcccacattacataaggttgtgccac 471165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 48751553 - 48751503
Alignment:
Q  553 gattgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||| |||||||||||||||||||| || |  |||||||||||    
T  48751553 gattgagaattgatgttcccacatttgataaggctgagaaacactagtaaa 48751503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 51271732 - 51271682
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||| |||  |||||||||||||||||  |||||||    
T  51271732 ttgagaattgttgttcccaaattacataaggttgtgccacacgggtaaatg 51271682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 94343 - 94392
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||  |||||||||||||| |||||||||  ||||||||    
T  94343 tgagaattgttgtttacacatttgataaggctgtgccacatgagtaaatg 94392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 15354698 - 15354649
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||| ||||||||||||  ||||||||||| ||||| ||||||||    
T  15354698 tgagaattgctgttcccacattacataaggttgtgtcacacgagtaaatg 15354649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 29765669 - 29765620
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||||||  |||||||||| |||||| | ||||||    
T  29765669 tgagaattgttgttcccacattgcataaggttgtaccacacgaataaatg 29765620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 128; Significance: 9e-66; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 4397 - 4230
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||| ||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||||||| || |    
T  4397 aaatgtttcatcagatgaaacaaccacctgctccccctacaaactattttcttgatcaacttcatttccatctccattcaattccaaaatccaatatttt 4298  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4297 tttaatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 4230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 4540 - 4493
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4540 tgagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 4493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 9e-66; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 29593351 - 29593184
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| || |    
T  29593351 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcatcatcaacttcatttctaccaccattcaatcccaaaatccaatatttt 29593252  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29593251 tttcatcaattcttaatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 29593184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 47741814 - 47741981
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||  | |    
T  47741814 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcatttccacctccattcaatcccaaaatctaatacttt 47741913  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  47741914 tttcatcaattcttgatccaaaatcattcaagcatcaagcataggaggtatcaagacacttttgacgt 47741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 18105450 - 18105617
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |    
T  18105450 aaatgtttcatccgatgaaacaactacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcctttttttt 18105549  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18105550 tttaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 18105617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 618747 - 618580
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||| |    
T  618747 aaatgtttcatccgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccaaccccattcaatcccaaaatccattttttt 618648  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  618647 tgtaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 618580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 300 - 539
Target Start/End: Original strand, 2569961 - 2570198
Alignment:
Q  300 cggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattc 399  Q
    ||||||||||| |||||||||||||| ||| ||||||| |  ||||| ||||||||| |||||||||| ||||||||||||||||||| |||| || |||    
T  2569961 cggtctattcaggtggtggtgatgcaagttaatttggtagt-ttgttgtgatttgtt-gtgttcgagctggttcgctttgtgctactgatccgccttttc 2570058  T
Q  400 tctgtctttggattttgacatcgggttattggt-ggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgccttttt 498  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||| ||| || | |||| ||||| |||  | ||||||||||||||||||||||||    
T  2570059 tctgtctttggattttggcatcgggttattggtgggtcgaggttttggtcagattaaggtgtttgctctggt-tgctcgtgagttgaggggtgccttttt 2570157  T
Q  499 gacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||| ||||||| ||||||  ||||||||||||||    
T  2570158 gacttgtgtcaggagtctggtgggcttatcgcttttgattc 2570198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 42499487 - 42499654
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||  || |||||||| ||||| |||||||||| || |    
T  42499487 atgtttcatcagatgaaacagtcacctgctccccctacacattattttcttcatcaacttcatttttcatctccattccaatccaaaaatccaatatttt 42499586  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||  |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  42499587 ttccatcaatccttgatccaaaatcattgaagcatcaagcataggaggtatcaacacacatttgacgt 42499654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 47061005 - 47061171
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| ||||||||| ||  ||| |||||||||||||||| |||||||||||  | |||| ||||| ||||||| ||||||||| ||| ||    
T  47061005 atgtttcatcagatgaaacagccacctcttcctcctacacactattttcatcatcaacttccataccacttccatccaatccccaaatccaatatttttt 47061104  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47061105 ttcatcaaatattgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 47061171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 30786602 - 30786768
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | ||||||||||| |||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  30786602 aaatgtttcatccgatgaaacagctacctgctccccctgcacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 30786699  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30786700 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 30786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 601 - 766
Target Start/End: Complemental strand, 43624142 - 43623978
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  43624142 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 43624045  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  43624044 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgac 43623978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 43033051 - 43033217
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| | ||     
T  43033051 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccattattt 43033148  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  43033149 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 43033217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 45763457 - 45763623
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| | ||||||||| ||||  ||||||||||||||||| ||||     
T  45763457 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccctcatttccaacctcatttcaatcccaaaatccatttttt 45763554  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  45763555 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 45763623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 609 - 768
Target Start/End: Complemental strand, 10708269 - 10708110
Alignment:
Q  609 catcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctttta-atc 707  Q
    ||||| || ||||||||| ||||||| |||||||||||||| | |||||||| |   | |||| ||||||||| ||| ||||||||| || ||| | |||    
T  10708269 catcaaatgaaacagccacctgctcctcctacacactattt-catcatcaacgtttataccacttccattcaaaccccaaatccaatattttttcatatc 10708171  T
Q  708 aattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10708170 aaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 10708110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 717 - 768
Target Start/End: Original strand, 36185987 - 36186038
Alignment:
Q  717 tccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36185987 tccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 36186038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 29593467 - 29593421
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29593467 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 29593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 43686998 - 43686941
Alignment:
Q  546 atcaattgattgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43686998 atcaattttttgagaattgctgttcccacatttgataaggttgtgccacactagtaaa 43686941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 539
Target Start/End: Complemental strand, 46262264 - 46262162
Alignment:
Q  436 cgagtttttggacaggtttatg-tgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgctttt 534  Q
    |||||||||||| || |||||| ||||| ||||||||  ||||||||||||||||||||||||||| | |||| |||||||| ||||||| ||| |||||    
T  46262264 cgagtttttggatag-tttatggtgtcttctccggtga-ttcgtgagttgaggggtgcctttttgattggtgttgggagtctggtgggccgatcactttt 46262167  T
Q  535 gattc 539  Q
    |||||    
T  46262166 gattc 46262162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 713 - 768
Target Start/End: Original strand, 15059793 - 15059848
Alignment:
Q  713 ttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  15059793 ttgatccaaaatcattcaagcatcaagcataggaggtatcaacacatatttgacgt 15059848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 539
Target Start/End: Complemental strand, 27993681 - 27993579
Alignment:
Q  436 cgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttg 535  Q
    |||||||||||| |||||   |||| ||||| ||||| |||||||||||||||||| |||| ||| ||||||||||||||| |||| || ||| ||||||    
T  27993681 cgagtttttggataggttatggtgtttgctctggtgg-ttcgtgagttgaggggtgtctttatgatttgtgtcgggagtctggtggaccgatcacttttg 27993583  T
Q  536 attc 539  Q
    ||||    
T  27993582 attc 27993579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 539
Target Start/End: Original strand, 6003331 - 6003412
Alignment:
Q  457 gtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||||||||| || |||| ||||| | ||||||||||| ||||||| |||||||| |||||| ||||||||||||||    
T  6003331 gtgtctgctccggtggttt-gtgaattgagtgatgcctttttgatttgtgtcaggagtcttatgggccgatcgcttttgattc 6003412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 537
Target Start/End: Complemental strand, 35206832 - 35206738
Alignment:
Q  442 tttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgat 537  Q
    |||||||| ||| | |||||||||| ||||||| | ||||||||||||| ||||||| | |||||| |||||||| ||||||| ||| ||||||||    
T  35206832 tttggacaagttaaggtgtctgctctggtgggt-catgagttgaggggtcccttttttatttgtgttgggagtctggtgggccgatcacttttgat 35206738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 46740634 - 46740679
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  46740634 gagaattgttgttcccacatttgataaggctgtgacacactagtaa 46740679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 48829897 - 48829942
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||    
T  48829897 gagaattgttgttcccacatttgataaggttgtggcacacgagtaa 48829942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 34142739 - 34142693
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  34142739 gagaattgttgttcccacattcgataaggtagtggcacactagtaaa 34142693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 42499343 - 42499389
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  42499343 gagaattgttgttcccacatgtgataaggttgtgtcacaccagtaaa 42499389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 555 - 605
Target Start/End: Original strand, 46738734 - 46738784
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||||  ||||||||||||||||| || |||||    
T  46738734 ttgagaattgttgttcccacattacataaggttgtgccacacgagcaaatg 46738784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 47741714 - 47741760
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  47741714 gagaattgttgttctcacattacataaggttgtgccacactagtaaa 47741760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 46740632 - 46740584
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||||||||||||||||||||||| |||| ||||  ||||||||    
T  46740632 gagaattgttgttcccacatttgataaggctgtgacacaagagtaaatg 46740584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 596
Target Start/End: Original strand, 5537800 - 5537839
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacac 596  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  5537800 gagaattgttgttcccacatttgataaggctgtggcacac 5537839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Complemental strand, 13921402 - 13921355
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  13921402 gagaattgttgttcccacatttggtttggttgtgccacacgagtaaat 13921355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 28564676 - 28564626
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    |||||||||||||||||||| ||||| |  ||||||||||||| |||||||    
T  28564676 attgagaattgttgttcccatatttggtttggttgtgccacacgagtaaat 28564626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Original strand, 40323200 - 40323250
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||||  |||||| |||||||||  ||||||||    
T  40323200 ttgagaattgttgttcccacattacataaggctgtgccacatgagtaaatg 40323250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 602
Target Start/End: Original strand, 40587607 - 40587653
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||| ||||||||||||||||| |||| ||||| |||||    
T  40587607 tgagaattgttgatcccacatttgataaggatgtgacacacgagtaa 40587653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 604
Target Start/End: Original strand, 27656971 - 27657020
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    |||||||||| |||||||||||||| |  ||||||||||||| |||||||    
T  27656971 ttgagaattgctgttcccacatttggtttggttgtgccacacgagtaaat 27657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 602
Target Start/End: Original strand, 34139839 - 34139876
Alignment:
Q  565 ttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  34139839 ttgttcccacatttgataaggttgtggcacacgagtaa 34139876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 6e-64; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 295 - 539
Target Start/End: Complemental strand, 26500565 - 26500318
Alignment:
Q  295 tgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgac 394  Q
    |||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||  ||||||| |    
T  26500565 tgcgtcggtctattcaggtggtggtgttgcaggttgatttggt-ggcttgttttgatttgtttttgttcgagctgattcgctttgtgcttttgttccgcc 26500467  T
Q  395 tattctctgtctttggattttgacatcgggttattggtg---gtcgagttttt--ggacaggtttatgtgtctgctccggtgggttcgtgagttgagggg 489  Q
    | ||||||||||||| |||||| |||| |||||||||||   |||||||||||  ||||||||| | |||| |||||  |||| ||||||||||||||||    
T  26500466 ttttctctgtctttgaattttggcatcaggttattggtgtgggtcgagtttttttggacaggttaaggtgtatgctctagtgg-ttcgtgagttgagggg 26500368  T
Q  490 tgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  26500367 tgcctttttgacttgtgtcggaagtcttgtgggtcgatcgcttttgattc 26500318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 293 - 539
Target Start/End: Original strand, 1798945 - 1799184
Alignment:
Q  293 tgtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccg 392  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||| |||| ||||||      |||||||||||| ||||| ||||| |||| ||||| |    
T  1798945 tgtgcgccgatctattcaggtggtggtgatgcaggttgttttggt-ggctggttttg------ttgtgttcgagctggttcactttgcgctattgttctg 1799037  T
Q  393 actattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtg 491  Q
     || |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  1799038 ccttttctctgtctttggattttggcatcgggttattggtgggtcgagtttttggataggttaaggtgtctgctccggtgg-ttcgtgagttgaggggtg 1799136  T
Q  492 cctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    ||||||||||||||||  |||||||||| | |||| ||||||||||||    
T  1799137 cctttttgacttgtgtaaggagtcttgttgaccaaacgcttttgattc 1799184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 604 - 768
Target Start/End: Complemental strand, 19073649 - 19073483
Alignment:
Q  604 tgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaattttctt 701  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| || ||    
T  19073649 tgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatcacaaaatccaatattttt 19073550  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19073549 tccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 19073483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 15999796 - 15999627
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||| ||    
T  15999796 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatatt 15999697  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  15999696 ttttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 15999627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 632 - 768
Target Start/End: Original strand, 3403908 - 3404043
Alignment:
Q  632 tccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaattcttgatccaaaatcattcaa 731  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  3403908 tccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcc-atttttttttgatcaatttttgatccaaaatcattcaa 3404006  T
Q  732 gcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||| |||||||||||||||||||||| |||||||    
T  3404007 gcatcaagcataggaggtatcaacacactattgacgt 3404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 4975844 - 4976009
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||  |||||||||||| | |||||||||||||||||| |||| |||| || |||    
T  4975844 atgtttcatcagatgaaacagtcacctgctccccctacatactatttttatcatcaacttcaataccacctccattcaatccccaaattcaatatttttt 4975943  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4975944 tcatcaaatcttgatccaaaatcattccagcatcaagcataggaggtatcaacacacttttgacgt 4976009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 9890072 - 9890239
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaattttct 700  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||| ||||| |||| || |    
T  9890072 atgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcatttttcatctccattccaatccaaaaattcaatatttt 9890171  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||  |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  9890172 ttccatcaatccttgatccaaaatcattcaagcatcaagcataagaggtatcaacacacatttgacgt 9890239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 11494622 - 11494787
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||| |||| ||||||||| ||||| ||| |||||||||||||| |||||||||||  | |||| ||||| ||||||| ||||||||| || |||    
T  11494622 atgtttcatgagatgaaacagccacctgcttcccttacacactattttcatcatcaacttccataccacttccatccaatccccaaatccaatatttttt 11494721  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11494722 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatccacacacttttgacgt 11494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 44049177 - 44049342
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||||| ||| |||||||||||||| ||||||||| |||||||||||| | ||  || ||||||||||| |||| |||| || |||    
T  44049177 atgtttcatcagatgaaacaaccacctgctccccctacatactattttcatcatcaacttcaataccttctacattcaatccccaaattcaatatttttt 44049276  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44049277 tcaccaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 44049342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 49566471 - 49566305
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  49566471 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 49566374  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  49566373 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 49566305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 604 - 768
Target Start/End: Original strand, 41023465 - 41023629
Alignment:
Q  604 tgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaattttctt 701  Q
    |||||||| ||||||||  |||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||| |||||||| || ||    
T  41023465 tgtttcatgagataaaa--gccacctgctccccctacacattattttcttcatcaacttcattttccatctccattccaatcccagaatccaatattttt 41023562  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |  ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41023563 tccatcaatcattgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 41023629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 1087910 - 1088079
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||| ||| |||||| ||    
T  1087910 aaatgtttcatcagatgaaacagctacctgctccccctacacactattttcttcatcaacttcattttccttctccattccaatccaaaattccaatatt 1088009  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  ||||||  ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  1088010 ttttccatcaatctttgatccaaaatcattcaagcatcaagcatagaaggtatcaacacacatttgacgt 1088079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 4768731 - 4768896
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||||| || |||||| || |||||||||||||| ||||||||| ||||||| |||  | |||| ||||| ||||||| ||||||||| || |||    
T  4768731 atgtttcatcatatgaaacagtcacctgctccccctacatactattttcatcatcaatttccataccacttccatccaatccctaaatccaatatttttt 4768830  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4768831 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacccttttgacgt 4768896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 294 - 539
Target Start/End: Original strand, 10388361 - 10388599
Alignment:
Q  294 gtgcgccggtctattcaagtggtggtgatgcaggttgatttggttggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccga 393  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| || || ||||| || |||||||      || |||||||||| ||||||||||||     
T  10388361 gtgcgccagtctattcaggtggtggtgatgcaggttgatttggt-ggatttttttggttagtttgtg------cccgttcgctttgcgctactgttccgc 10388453  T
Q  394 ctattctctgtctttggattttgacatcgggttattggtgg-tcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgc 492  Q
    || |||||| ||||||||||||| ||||||||||||| ||| || |||||| ||||| ||  | ||||||||||  |||  ||||||||||||||| ||     
T  10388454 cttttctctctctttggattttggcatcgggttattgatgggtcaagttttgggacatgtaaaggtgtctgctctagtgc-ttcgtgagttgagggatgt 10388552  T
Q  493 ctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||||||||||| |||| |||||||||||||| ||| ||||||||||    
T  10388553 ctttttgacttgcgtcgagagtcttgtgggccgatcacttttgattc 10388599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 13173312 - 13173476
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttc-cacctccattc-aatcccaaaatccaattttct 700  Q
    |||||||||| ||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||  || |||||||| ||||| |||||||| ||||      
T  13173312 atgtttcatctgatgaaacagccacctgctccccctacattctattttcttcatcaacttcatttttcatctccattccaatccaaaaatccattttt-- 13173409  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  13173410 -ttcatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 13173476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 21470982 - 21471146
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||| ||| |||||| || ||||||||| |||||||||||||| || ||||||||  | |||| ||||| |||| || ||||||||| || |||    
T  21470982 atgtttcatcggatgaaacagtcacctgctccccatacacactattttcatcgtcaacttccataccacttccatccaattcccaaatccaatatt-ttt 21471080  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21471081 tcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 21471146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 3450074 - 3449908
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| |||||| |  |||||||||||||||||||||||| ||||||||||   | |||| ||||| ||||||| ||||||||| ||| ||    
T  3450074 atgtttcatcagatgaaacagtcccctgctccccctacacactattttcatcatcaactttcataccacttccatccaatccccaaatccaatatttttt 3449975  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| | ||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  3449974 ttcatcaaattttgctccaaaatcattcaagcatcaggcataagaggtatcaacacatttttgacgt 3449908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 18581326 - 18581161
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||| | |||||||||||  | |||| ||||| ||| ||| ||||||||| ||| ||    
T  18581326 atgtttcatcagatgaaacaaccacctgctccccctacacactattt-catcatcaacttccataccacttccatccaaaccccaaatccaatatttttt 18581228  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  18581227 ttcatcaaatcttgctccaaaatcattcaagcatcaagcataggaggtatcaacagacttttgacgt 18581161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 38464760 - 38464598
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || ||   ||||||||||||||||||| |||||||||||  | |||| ||||| ||||||| ||||||||| || | |    
T  38464760 atgtttcatcagatgaaacagtcacct---ccccctacacactattttcatcatcaacttccataccacttccatccaatccccaaatccaatattttgt 38464664  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||    
T  38464663 tcatcaaatcttgatccaaaatcattcaagcatcaagcataagaggtattagcacacttttgacgt 38464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 607 - 768
Target Start/End: Complemental strand, 4979907 - 4979752
Alignment:
Q  607 ttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttcttttaa 705  Q
    |||||||||| |||||| || |||||||||||||| ||||||||| ||||||||||||    ||||||||||||||||| ||||||||| ||| |||| |    
T  4979907 ttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcaacatcacctccattcaatccccaaatccaatattttttttca 4979808  T
Q  706 tcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||| |||||||||||||||||||||       |||||||||||||||| |||||||||||||    
T  4979807 tcaaatcttgatccaaaatcattcaa-------gcataggaggtatcaatacacttttgacgt 4979752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 338 - 539
Target Start/End: Complemental strand, 17416753 - 17416552
Alignment:
Q  338 tggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgaca-tcgggttattggtggtc 436  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||| |  || ||||||||||| ||| |||| || | || ||||||  || |    
T  17416753 tggcttgttttgatttgtttgtgttcgagctggttcgctttgcgctattgtttcaccttttctctgtcttaggaatttggcatttggtttattgtgggcc 17416654  T
Q  437 gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttga 536  Q
    ||||||||||||||||| | |||||| |||  || |||||||||||||||||||||||   ||| | |||||| ||| || ||||||| ||| |||||||    
T  17416653 gagtttttggacaggttaaggtgtctactctagt-ggttcgtgagttgaggggtgcctaaatgattggtgtcgagagcctagtgggccgatcacttttga 17416555  T
Q  537 ttc 539  Q
    |||    
T  17416554 ttc 17416552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 17139675 - 17139848
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat----- 695  Q
    |||||||||||||||| |||||| ||||||||| ||||| ||||||||| | |||||||||||  | |||| ||||| ||||||| |||| ||||         
T  17139675 aaatgtttcatcagatgaaacagtcatctgctctccctaaacactattt-catcatcaacttctataccacttccatccaatccccaaatgcaatattta 17139773  T
Q  696 --tttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
      ||| |||| ||||| ||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  17139774 tttttttttttatcaaatcttgctccaaaatcattgaagcatcaaccataggaggtatcaacacacttttgacgt 17139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 23040744 - 23040631
Alignment:
Q  341 cttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattgg-tggtcgag 439  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||| || |||||||||| ||||||||| |||||| || ||||  |||||||    
T  23040744 cttgttttgatttatttgtgttcgagctggttcgctttgcgctactgttccgtcttttctctgtctatggattttggcatcggatttttggagggtcgag 23040645  T
Q  440 tttttggacaggtt 453  Q
    ||||| ||||||||    
T  23040644 tttttagacaggtt 23040631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 539
Target Start/End: Complemental strand, 37707596 - 37707398
Alignment:
Q  338 tggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggtgg-tc 436  Q
    ||||||| |||||||||||| ||||||||| || ||| ||||| ||||| ||||  |   | |||||||||| |  ||| |||| |||| ||||||| ||    
T  37707596 tggcttggtttgatttgtttctgttcgagctggatcgatttgtactactattccaccg--tgtctgtctttg-agcttggcatctggtttttggtgggtc 37707500  T
Q  437 gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttga 536  Q
    ||||||||||| || |||  |||||||||| ||||| ||||||||||||||||||||||||||   |||||||||||||| ||||||| ||| |||||||    
T  37707499 gagtttttggatagattttggtgtctgctctggtgg-ttcgtgagttgaggggtgcctttttgctatgtgtcgggagtctggtgggccgatcacttttga 37707401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 539
Target Start/End: Complemental strand, 40814017 - 40813824
Alignment:
Q  345 ttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggtggtc-gagtttt 443  Q
    ||||| ||||||| | ||||||| |||||| |||| |||||||||||  || ||||||| ||| | |||| | |||| ||||  |||||| | |||||||    
T  40814017 ttttggtttgtttatattcgagctggttcgttttgcgctactgttccaccttttctctgccttcgaatttgg-catctggtttatggtgggccgagtttt 40813919  T
Q  444 tggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgcttttgattc 539  Q
    |||| ||||| | ||||||||||  |||| ||||||| |||| |||||||||| ||| ||| ||||||||||| ||||||| ||| ||||||||||    
T  40813918 tggataggttaaggtgtctgctctagtgg-ttcgtgaattgaagggtgcctttatgatttgcgtcgggagtctggtgggccgatcacttttgattc 40813824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 687 - 768
Target Start/End: Original strand, 30042605 - 30042686
Alignment:
Q  687 aaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||| || |||| ||||| ||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  30042605 aaatccaatatttttttcatcaaatcttgctccaaaatcatttaagcatcaagcataggaggtatcaacacccttttgacgt 30042686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 24417413 - 24417247
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| |||||||||  |||||||| ||||||||  |||| |||||||||||  | |||| |||||  |||||| ||||||||| || |    
T  24417413 aaatgtttcatcagatgaaacagccacttgctcccc-tacacact--tttcatcatcaacttccataccacttccatctaatccccaaatccaatatt-t 24417318  T
Q  701 tttaa--tcaattctt-gatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||   |||| |||| | |||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  24417317 tttaccttcaaatcttagctccaaaatcattgaagcatcaaacataggagatatcaacacacttttgacgt 24417247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 51644493 - 51644328
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||  | |||| | |||  || ||| ||||||||            
T  51644493 atgtttcatcaaatgaaacagccatctgctccccctacacactattt-catcatcaacttccataccactttcatcaaaaccccaaatccaaaaaaaaaa 51644395  T
Q  703 -taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  51644394 atcatcaaatctggctccaaaatcattcaagcatcaagcatatgaggtatcaacacacttttgacgt 51644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 56138181 - 56138227
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  56138181 gagaattgctgttcccacatttgataaggttgtgccacactagtaaa 56138227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 19073781 - 19073732
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19073781 attgagaattgttgttcccacatgtgataaggttgtgccacaccagtaaa 19073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 50278937 - 50278892
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||    
T  50278937 gagaattgttgttcccacatttgataaggttgtggcacacgagtaa 50278892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 763
Target Start/End: Complemental strand, 8361936 - 8361860
Alignment:
Q  687 aaatccaattttcttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacactttt 763  Q
    ||||||||| |  |||| ||||| |||||||||||||||||| ||| ||||  | ||||||||||||||||||||||    
T  8361936 aaatccaatatctttttcatcaaatcttgatccaaaatcattgaagaatcaatcctaggaggtatcaacacactttt 8361860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 9889926 - 9889974
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  9889926 ttgagaattgttgttcccacatgtgataaggctgtgccacaccagtaaa 9889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 44674099 - 44674147
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  44674099 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatg 44674147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 51492006 - 51492054
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  51492006 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatg 51492054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 37394181 - 37394228
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  37394181 tgagaattactgttcccacatttgatatggttgtgccacactagtaaa 37394228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 554 - 588
Target Start/End: Original strand, 56304808 - 56304842
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttg 588  Q
    |||||||||||||||||||||||||||||||||||    
T  56304808 attgagaattgttgttcccacatttgataaggttg 56304842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 603
Target Start/End: Complemental strand, 56140762 - 56140725
Alignment:
Q  566 tgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||| |||||||||||||||||||||||||||||||||    
T  56140762 tgtttccacatttgataaggttgtgccacactagtaaa 56140725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 605
Target Start/End: Original strand, 16983456 - 16983504
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||  |||||||||||||| |||||||||| ||||||||    
T  16983456 gagaattgttgtttacacatttgataaggctgtgccacacgagtaaatg 16983504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 603
Target Start/End: Complemental strand, 37395316 - 37395285
Alignment:
Q  572 cacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||||||||||||||    
T  37395316 cacatttgataaggttgtgccacactagtaaa 37395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 1044658 - 1044612
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| |||||| ||||||||||| ||| |||||||||||||||    
T  1044658 gagaattgatgttccaacatttgataaagttatgccacactagtaaa 1044612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 585
Target Start/End: Complemental strand, 9491394 - 9491364
Alignment:
Q  555 ttgagaattgttgttcccacatttgataagg 585  Q
    |||||||||||||||||||||||||||||||    
T  9491394 ttgagaattgttgttcccacatttgataagg 9491364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 16984302 - 16984252
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||| ||||  |||||||||||||| |||||||||| ||||||||    
T  16984302 ttgagaattgctgtttacacatttgataaggctgtgccacacgagtaaatg 16984252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 556 - 602
Target Start/End: Original strand, 50274693 - 50274739
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    ||||||||||||||||||||||||||| || |||| ||||| |||||    
T  50274693 tgagaattgttgttcccacatttgatagggctgtggcacacgagtaa 50274739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 590
Target Start/End: Original strand, 1041869 - 1041902
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtg 590  Q
    ||||||||||||||||||||||||||||| ||||    
T  1041869 gagaattgttgttcccacatttgataaggctgtg 1041902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 604
Target Start/End: Complemental strand, 26792385 - 26792336
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||||||||| |  || |||||||||| |||||||    
T  26792385 ttgagaattgttgttcccacatttggtttggctgtgccacacgagtaaat 26792336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 3e-56; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 18347092 - 18347259
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    ||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||| |    
T  18347092 aaatgtttcatccaatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccaaccccattcaatcccaaaatccattttttt 18347191  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18347192 tgtaatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 18347259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 7363311 - 7363145
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| |||| |||| ||| ||    
T  7363311 atgtttcatcagatgaaacagtcatctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaatatttttt 7363212  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7363211 ttcatcaaatcttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 7363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 28249962 - 28250127
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||  ||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||| |    
T  28249962 aaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccacttccattcaatcccaaaatcca--ttttt 28250059  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||    
T  28250060 tttaatcaatttttgatccaaaatcattcaagcgtcaagcatagaaggtatcaacacactattgacgt 28250127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 618 - 768
Target Start/End: Complemental strand, 2052606 - 2052458
Alignment:
Q  618 aaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaattcttgat 717  Q
    ||||||| | |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||||||  ||| ||||| |||||||    
T  2052606 aaacagctacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatttt--tttcatcaaatcttgat 2052509  T
Q  718 ccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2052508 ccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 2052458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 31146452 - 31146620
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat----ttt 698  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | |  |||||||||||| |||||||||    ||     
T  31146452 atgtttcatctgatgaaacagccatctgctccccctacacacta-tttcatcatcaacttcattttccctaccattcaatccccaaatccaatattatta 31146550  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||| ||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31146551 ttttttatcaaatattgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 31146620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 601 - 735
Target Start/End: Complemental strand, 13388704 - 13388572
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |    
T  13388704 aaatgtttcatccgatgaaacaactacctgctccccctacacactattttcttcatcaccttcatttccacctccattcaatcccaaaatcca--ttttt 13388607  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcat 735  Q
    ||| ||||||| |||||||||||||||||||||||    
T  13388606 ttttatcaatttttgatccaaaatcattcaagcat 13388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 610 - 768
Target Start/End: Original strand, 18606130 - 18606289
Alignment:
Q  610 atcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctttta-atca 708  Q
    ||||||| |||||| || |||||||||||||||||||||||| |||||||||||  | |||| ||||| ||||||| ||||||||| || ||||  ||||    
T  18606130 atcagatgaaacagtcacctgctccccctacacactattttcatcatcaacttccataccacttccatccaatccccaaatccaatatttttttccatca 18606229  T
Q  709 attcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18606230 aatcttgattcaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 18606289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 1612743 - 1612577
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||  ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  1612743 aaatgtttcatacgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 1612646  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  1612645 ctataatcaatttttgattcaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 1612577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 619 - 766
Target Start/End: Original strand, 7361256 - 7361404
Alignment:
Q  619 aacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat--tttcttttaatcaattcttga 716  Q
    ||||| || |||||||||||||| ||||||||| |||||||||||| | |||||| ||||||||| |||| ||||||  ||| |||| ||||| |||| |    
T  7361256 aacagtcacctgctccccctacatactattttcatcatcaacttcaataccaccttcattcaatctcaaa-tccaatatttttttttcatcaaatcttaa 7361354  T
Q  717 tccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgac 766  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7361355 tccaaaatcattcaagcatcaaacataggaggtatcaacacacttttgac 7361404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 603 - 764
Target Start/End: Complemental strand, 23986001 - 23985841
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || ||||||||||||||||| |||| | |||||||||||  |||||| | ||| ||||||| ||||||||| || |||    
T  23986001 atgtttcatcagatgaaacagtcacctgctccccctacacaccattt-catcatcaacttccattccactttcatccaatccccaaatccaatatttttt 23985903  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttg 764  Q
    | ||||| ||||| | ||||||||||||||||||| ||||||||| ||| | ||||||||||    
T  23985902 tcatcaaatcttgcttcaaaatcattcaagcatcaagcataggagctattagcacacttttg 23985841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 24218096 - 24218260
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||||||| ||||| ||| |||| ||| ||||||||||||| | |||||||||||  | ||||  ||||  |||||| |||| |||| || |    
T  24218096 aaatgtttcatcagatgaaacaaccacctgc-ccctctacacactattt-catcatcaacttccataccactcccatctaatccccaaattcaatatt-t 24218192  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||| ||||| || || |||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  24218193 tttcatcaaatcatgctccaaaatcattgaagcatcaagcataggaggtatcaacacacttctgacgt 24218260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 705 - 768
Target Start/End: Original strand, 26701999 - 26702062
Alignment:
Q  705 atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26701999 atcaaatcttgctccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 26702062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 628 - 768
Target Start/End: Complemental strand, 2260315 - 2260175
Alignment:
Q  628 ctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttctttta-atcaattcttgatccaaaatca 726  Q
    |||||||||||| || |||||| | |||||||||||  |  ||| ||||| ||||||| ||||| |||||| ||||  ||||| ||||| ||||||||||    
T  2260315 ctgctccccctatacgctattt-catcatcaacttccataacacttccatccaatccccaaatctaattttttttttcatcaaatcttgctccaaaatca 2260217  T
Q  727 ttcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||||||  |||||| ||||||||||||||||||||||    
T  2260216 ttgaagcatcaaacataggcggtatcaacacacttttgacgt 2260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 433 - 539
Target Start/End: Complemental strand, 7546577 - 7546472
Alignment:
Q  433 ggtcgagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtcgggagtcttgtgggccaatcgctt 532  Q
    ||||||||||||||| |||||   |||||||||| ||||| ||||||||||||||||||||||||| | | |||| | |||||| |||| || ||| |||    
T  7546577 ggtcgagtttttggataggttatggtgtctgctctggtgg-ttcgtgagttgaggggtgccttttttattggtgttgagagtctggtggaccgatcactt 7546479  T
Q  533 ttgattc 539  Q
    |||||||    
T  7546478 ttgattc 7546472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 338 - 508
Target Start/End: Original strand, 12129058 - 12129225
Alignment:
Q  338 tggcttgttttgatttgtttgtgttcgagccggttcgctttgtgctactgttccgactattctctgtctttggattttgacatcgggttattggt-ggtc 436  Q
    |||||||||||||||||||| ||||||||| |||| | |||| || ||||||||  || ||||| ||| || || |||| ||||||| || |||| || |    
T  12129058 tggcttgttttgatttgtttttgttcgagctggtttgatttgcgccactgttccaccttttctccgtc-ttcgaatttggcatcgggataatggtgggcc 12129156  T
Q  437 gagtttttggacaggtttatgtgtctgctccggtgggttcgtgagttgaggggtgcctttttgacttgtgtc 508  Q
    |||  |||||||| ||||| |||||| ||| |||||| ||||||||||| ||||||||| || | |||||||    
T  12129157 gag--tttggacaagtttaggtgtcttctctggtggg-tcgtgagttgatgggtgccttattaatttgtgtc 12129225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 605
Target Start/End: Complemental strand, 14012515 - 14012465
Alignment:
Q  555 ttgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  14012515 ttgagaattgttgttcccacatttaataaggctgtgccacacgagtaaatg 14012465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 117973 - 117928
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||    
T  117973 gagaattgatgttcccacatttgataaggttgtgtcacacgagtaa 117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 554 - 590
Target Start/End: Original strand, 31768684 - 31768720
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtg 590  Q
    |||||||||||||||||||||||||||||||| ||||    
T  31768684 attgagaattgttgttcccacatttgataaggctgtg 31768720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Original strand, 32691085 - 32691132
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  32691085 gagaattgttgttcccacatttggtttggttgtgccacacaagtaaat 32691132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 611 - 649
Target Start/End: Original strand, 13479790 - 13479828
Alignment:
Q  611 tcagataaaacagccatctgctccccctacacactattt 649  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  13479790 tcagatgaaacagccacctgctccccctacacactattt 13479828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 11687392 - 11687441
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||| ||||||||||||  |||| |||||||||||| ||||||||    
T  11687392 tgagaattgctgttcccacattatataaagttgtgccacacgagtaaatg 11687441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 11688032 - 11687983
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaatg 605  Q
    ||||||||| ||||||||||||  |||||| |||||||||| ||||||||    
T  11688032 tgagaattgctgttcccacattacataaggctgtgccacacgagtaaatg 11687983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 110; Significance: 5e-55; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 933 - 1102
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||| ||    
T  933 aaatgtttcatcagatgaaacagccacctgctccccctacacactattttcttcatcaacttcattttccatctccattccaatccaaaaatccaatatt 1032  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1033 ttttccatcaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacatttgacgt 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 765 - 811
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    |||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  765 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaa 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 554 - 604
Target Start/End: Complemental strand, 11595 - 11545
Alignment:
Q  554 attgagaattgttgttcccacatttgataaggttgtgccacactagtaaat 604  Q
    |||||||||||||||||||||||||| |  || |||||||||| |||||||    
T  11595 attgagaattgttgttcccacatttggtttggctgtgccacacgagtaaat 11545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 105; Significance: 5e-52; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 50124 - 50289
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttct 700  Q
    |||||||||||  ||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||| |    
T  50124 aaatgtttcatttgatgaaacagctacctgctccccctacacactattttcttcatcaccttcatttccacttccattcaatcccaaaatcca--ttttt 50221  T
Q  701 tttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||    
T  50222 tttaatcaatttttgatccaaaatcattcaagcgtcaagcatagaaggtatcaacacactattgacgt 50289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 17348 - 17180
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcattt-ccacctccattc-aatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||    
T  17348 aaatgtttcatcagatgaaacagccacctgctccctcta-acactattttcttcatcaacttcattttccatctccattccaatcccaaaatccaatatt 17250  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17249 ttttccaacaatccttgatccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 17180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 603
Target Start/End: Complemental strand, 17491 - 17444
Alignment:
Q  556 tgagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  17491 tgagaattgctgttcccacatgtgataaggttgtgccacactagtaaa 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 603 - 768
Target Start/End: Original strand, 15756 - 15920
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| |||| |||| || |||    
T  15756 atgtttcatcagatgaaacagtcacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaattcaatatt-ttt 15854  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15855 tcatcaaatcttgatccaaaatcattcaagcatcaagcataagaggtatcaacacacttttgacgt 15920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 601 - 768
Target Start/End: Original strand, 11831 - 11997
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttcca-cctccattcaatcccaaaatccaattttc 699  Q
    |||||||||||| ||| ||||||| | |||||||||||||||||||||||  |||||| ||||||||||| ||||  ||||||||||||||||| ||||     
T  11831 aaatgtttcatccgatgaaacagctacctgctccccctacacactatttt--tcatcaccttcatttccaacctcatttcaatcccaaaatccatttttt 11928  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  11929 ctataatcaatttttgatccaaaatcattcaagcatcaagcataggaggtatcaacacactattgacgt 11997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 601 - 737
Target Start/End: Original strand, 5348 - 5485
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttc 699  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||| ||||||||| |||     
T  5348 aaatgtttcatcagatgaaacagccacctgctccccctacatactattttcatcatcaacttcaataccacctccattcaatccccaaatccaatatttt 5447  T
Q  700 ttttaatcaattcttgatccaaaatcattcaagcatca 737  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  5448 ttttcatcaaatcttgatccaaaatcattcaagcatca 5485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 601 - 768
Target Start/End: Complemental strand, 420 - 251
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttca-tttccacctccatt-caatcccaaaatccaatttt 698  Q
    |||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||| ||| |||||| ||    
T  420 aaatgtttcatcagatgaaacagctacttgctccccctacacactattttcttcatcaacttcattttccttctccattccaatccaaaattccaatatt 321  T
Q  699 cttttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
     |||  ||||||  ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  320 ttttccatcaatctttgatccaaaatcattcaagcatcaagcatagaaggtatcaacacacatttgacgt 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 1175 - 1011
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttt 702  Q
    |||||||||||||| ||| |||||  |||||||||   | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || |||    
T  1175 atgtttcatcagatgaaatagccacatgctcccccataatactattttcatcatcaacttcatttccacctccattcaatccctaaatccaatatt-ttt 1077  T
Q  703 taatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    | ||||| | |||||||||||| |||||||||||| | ||||| ||||||||||||||||||||||    
T  1076 tcatcaaattttgatccaaaattattcaagcatcaagtataggtggtatcaacacacttttgacgt 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 603 - 768
Target Start/End: Complemental strand, 855 - 689
Alignment:
Q  603 atgtttcatcagataaaacagccatctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttctt 701  Q
    |||||||||||||| |||||| |  |||||||||||||||||||||||| ||||||||||   | |||| ||||| ||||||| ||||||||| ||| ||    
T  855 atgtttcatcagatgaaacagtcccctgctccccctacacactattttcatcatcaactttcataccacttccatccaatccccaaatccaatatttttt 756  T
Q  702 ttaatcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    || ||||| | ||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  755 ttcatcaaattttgctccaaaatcattcaagcatcaggcataagaggtatcaacacatttttgacgt 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 628 - 768
Target Start/End: Complemental strand, 7283 - 7144
Alignment:
Q  628 ctgctccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaattttcttttaatcaattcttgatccaaaatcat 727  Q
    |||||||||||||||||||||||| |||||||||||  | |||  ||||| ||||||  ||||||||| || |||| ||||| |||||||||||||||||    
T  7283 ctgctccccctacacactattttcatcatcaacttccataccat-tccatccaatcctcaaatccaatatttttttcatcaaatcttgatccaaaatcat 7185  T
Q  728 tcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  7184 tcaagcatcaagcataggaggtatcaacacacttttgacgt 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 705 - 768
Target Start/End: Complemental strand, 23135 - 23072
Alignment:
Q  705 atcaattcttgatccaaaatcattcaagcatcaggcataggaggtatcaacacacttttgacgt 768  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23135 atcaaatcttgctccaaaatcattcaagcatcaagcataggaggtatcaacacacttttgacgt 23072  T

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Target: scaffold0388 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 633 - 766
Target Start/End: Complemental strand, 11706 - 11574
Alignment:
Q  633 ccccctacacactattttcttcatcaacttcatttccacctccattcaatcccaaaatccaat-tttcttttaatcaattcttgatccaaaatcattcaa 731  Q
    ||||||||||||||||| | |||||||||||  | |||| || || ||| ||| ||||||||| ||| |||| ||||| | ||| || ||||||||||||    
T  11706 ccccctacacactattt-catcatcaacttccataccacttc-atccaaaccccaaatccaatattttttttcatcaaattttgctctaaaatcattcaa 11609  T
Q  732 gcatcaggcataggaggtatcaacacacttttgac 766  Q
    |||||| ||||| ||||||||||||||||||||||    
T  11608 gcatcaagcatacgaggtatcaacacacttttgac 11574  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 603
Target Start/End: Complemental strand, 3664 - 3618
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 603  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  3664 gagaattgttgttcccacattcgataaggtagtggcacactagtaaa 3618  T

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Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 602
Target Start/End: Original strand, 764 - 801
Alignment:
Q  565 ttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  764 ttgttcccacatttgataaggttgtggcacacgagtaa 801  T

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Target: scaffold2089 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 649
Target Start/End: Complemental strand, 336 - 287
Alignment:
Q  601 aaatgtttcatcagataaaacagccatctgct-ccccctacacactattt 649  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  336 aaatgtttcatcagatgaaacagccacctgctcccccctacacactattt 287  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 602
Target Start/End: Original strand, 17965 - 18010
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||| |||||||||||||||||| |||||| ||||| |||||    
T  17965 gagaattgatgttcccacatttgataaagttgtggcacacgagtaa 18010  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 602
Target Start/End: Complemental strand, 54879 - 54834
Alignment:
Q  557 gagaattgttgttcccacatttgataaggttgtgccacactagtaa 602  Q
    |||||||| |||||||||||||||||| |||||| ||||| |||||    
T  54879 gagaattgatgttcccacatttgataaagttgtggcacacgagtaa 54834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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